RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 SCGB3A2Q96PL1 93 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 KIR2DL4Q99706 377 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 PRRT1Q99946 306 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 RTBDNQ9BSG5 229 aaPredicted RBP2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 CHRDL1Q9BU40 450 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 SLIRPQ9GZT3 109 aaKnown RBP2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 TMEM222Q9H0R3 208 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 TUBA4BQ9H853 241 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 DAZ1Q9NQZ3 744 aaKnown RBP2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 COPZ2Q9P299 210 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 CACFD1Q9UGQ2 172 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 RSL24D1Q9UHA3 163 aaKnown RBP2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 SMPXQ9UHP9 88 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 TP53TG1Q9Y2A0 90 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 STRAPQ9Y3F4 350 aaKnown RBP2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 S4R3C0 116 aa2.47□□□□□ -2.01
CKS1BP3-201ENST00000600888 TRAV30A0A087WSZ9 112 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 LOC102724200A0A096LPH7 203 aaPredicted RBP2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 TRAV2A0A0B4J234 112 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 KIR2DL5BA0A0G2JN68 375 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 KIR2DL5BA0A0G2JPC4 375 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 A0A0G2JRQ6 117 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 IGHV7-4-1A0A0J9YVY3 117 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 RBMY1BA6NDE4 496 aaKnown RBP2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 RBMY1EA6NEQ0 496 aaKnown RBP2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 OR2T8A6NH00 312 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 OR4C46A6NHA9 309 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 CRYM-AS1A6NIL9 109 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 ZFP92A6NM28 416 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 H0Y9J4 135 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 GNG7O60262 68 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 TMEM50AO95807 157 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 MT-CO2P00403 227 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 OR5AC1P0C628 307 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 RBMY1DP0C7P1 496 aaKnown RBP2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 RNASE2P10153 161 aaKnown RBP2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 BMI1P35226 326 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 SNCAP37840 140 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 ETV6P41212 452 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 HTR2BP41595 481 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 AKR1C2P52895 323 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 ATP5IP56385 69 aaPredicted RBP2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 SPCS3P61009 180 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 IL18Q14116 193 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 GUCA2BQ16661 112 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 SCGB2B2Q4G0G5 96 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 C2orf83Q53S99 150 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 ETFRF1Q6IPR1 90 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 SELENOHQ8IZQ5 122 aaKnown RBP2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 KIR2DL5AQ8N109 375 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 CEND1Q8N111 149 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 DEFB125Q8N687 156 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 DUSP18Q8NEJ0 188 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 OR52B4Q8NGK2 314 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 OR4C16Q8NGL9 310 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 OR4X1Q8NH49 305 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 KIR2DL5BQ8NHK3 375 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 LHFPL5Q8TAF8 219 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 RNASEH2CQ8TDP1 164 aaKnown RBP2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 CACNG8Q8WXS5 425 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 SLC25A21Q9BQT8 299 aaPredicted RBP2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 GINS3Q9BRX5 216 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 PDCD10Q9BUL8 212 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 HINT2Q9BX68 163 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 VSIRQ9H7M9 311 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 NAA60Q9H7X0 242 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 SCP2D1Q9UJQ7 156 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 C14orf166Q9Y224 244 aaKnown RBP2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 KCNIP3Q9Y2W7 256 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 TMEM56-RWDD3S4R434 201 aa2.46□□□□□ -2.02
CKS1BP3-201ENST00000600888 TRAV14DV4A0A0A6YYC5 116 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 A0A0B4J2A0 478 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 DUXBA0A1W2PPF3 345 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 FABP12A6NFH5 140 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 NOL3O60936 208 aaKnown RBP2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 SCGB2A1O75556 95 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 IFNA17P01571 189 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 SLC25A4P12235 298 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 SLC25A6P12236 298 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 CRYBB3P26998 211 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 FAUP35544 74 aaKnown RBP2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 CCR6P51684 374 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 APOC4P55056 127 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 AP3S2P59780 193 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 YPEL3P61236 119 aaPredicted RBP2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 SUPT4H1P63272 117 aaKnown RBP2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 TRIM16LQ309B1 348 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 SP6Q3SY56 376 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 Q56UQ5 140 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 TMEM128Q5BJH2 165 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 NMSQ5H8A3 153 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 TOMM20LQ6UXN7 152 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 SLC35G3Q8N808 338 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 UBAC2Q8NBM4 344 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 OR51S1Q8NGJ8 323 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 MCFD2Q8NI22 146 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 TMEM230Q96A57 120 aa2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 PINX1Q96BK5 328 aaKnown RBP2.45□□□□□ -2.02
CKS1BP3-201ENST00000600888 GPR146Q96CH1 333 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms