RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 TRAV1-1A0A0B4J248 108 aa16.46■□□□□ 0.23
LTBP4-224ENST00000599016 NBEAP1P0C6P0 100 aa16.46■□□□□ 0.23
LTBP4-224ENST00000599016 IGLC2P0DOY2 106 aa16.46■□□□□ 0.23
LTBP4-224ENST00000599016 SAMD13Q5VXD3 122 aa16.46■□□□□ 0.23
LTBP4-224ENST00000599016 GBGT1Q8N5D6 347 aa16.46■□□□□ 0.23
LTBP4-224ENST00000599016 FXYD5Q96DB9 178 aa16.46■□□□□ 0.23
LTBP4-224ENST00000599016 A0A1B0GV50 99 aa16.45■□□□□ 0.22
LTBP4-224ENST00000599016 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.45■□□□□ 0.22
LTBP4-224ENST00000599016 BLNKQ8WV28 456 aa16.45■□□□□ 0.22
LTBP4-224ENST00000599016 MS4A6AQ9H2W1 248 aa16.45■□□□□ 0.22
LTBP4-224ENST00000599016 ZNF586Q9NXT0 402 aa16.45■□□□□ 0.22
LTBP4-224ENST00000599016 PKD1L1Q8TDX9 2849 aa16.45■□□□□ 0.22
LTBP4-224ENST00000599016 NOTCH3Q9UM47 2321 aa16.44■□□□□ 0.22
LTBP4-224ENST00000599016 TRAV2A0A0B4J234 112 aa16.44■□□□□ 0.22
LTBP4-224ENST00000599016 H3BQ15 152 aa16.44■□□□□ 0.22
LTBP4-224ENST00000599016 SNRPCP09234 159 aaKnown RBP16.44■□□□□ 0.22
LTBP4-224ENST00000599016 TFPI2P48307 235 aa16.44■□□□□ 0.22
LTBP4-224ENST00000599016 PSMB3P49720 205 aa16.44■□□□□ 0.22
LTBP4-224ENST00000599016 PPT1P50897 306 aa16.44■□□□□ 0.22
LTBP4-224ENST00000599016 PDE6HQ13956 83 aa16.44■□□□□ 0.22
LTBP4-224ENST00000599016 GUCA2BQ16661 112 aa16.44■□□□□ 0.22
LTBP4-224ENST00000599016 WFDC3Q8IUB2 231 aa16.44■□□□□ 0.22
LTBP4-224ENST00000599016 SPAG8Q99932 426 aaPredicted RBP16.44■□□□□ 0.22
LTBP4-224ENST00000599016 TMPRSS5Q9H3S3 457 aa16.44■□□□□ 0.22
LTBP4-224ENST00000599016 TRBV19A0A075B6N1 114 aa16.43■□□□□ 0.22
LTBP4-224ENST00000599016 OR4C46A6NHA9 309 aa16.43■□□□□ 0.22
LTBP4-224ENST00000599016 ID1P41134 155 aa16.43■□□□□ 0.22
LTBP4-224ENST00000599016 SLC50A1Q9BRV3 221 aa16.43■□□□□ 0.22
LTBP4-224ENST00000599016 IZUMO1RA6ND01 250 aa16.42■□□□□ 0.22
LTBP4-224ENST00000599016 H3BTX0 84 aa16.42■□□□□ 0.22
LTBP4-224ENST00000599016 ZNF253O75346 499 aa16.42■□□□□ 0.22
LTBP4-224ENST00000599016 PSG9Q00887 426 aa16.42■□□□□ 0.22
LTBP4-224ENST00000599016 SUN5Q8TC36 379 aa16.42■□□□□ 0.22
LTBP4-224ENST00000599016 C16orf92Q96LL3 132 aa16.42■□□□□ 0.22
LTBP4-224ENST00000599016 C17orf77Q96MU5 243 aa16.42■□□□□ 0.22
LTBP4-224ENST00000599016 TRRAPQ9Y4A5 3859 aa16.41■□□□□ 0.22
LTBP4-224ENST00000599016 DCANP1Q8TF63 244 aa16.41■□□□□ 0.22
LTBP4-224ENST00000599016 ZMAT5Q9UDW3 170 aaKnown RBP16.41■□□□□ 0.22
LTBP4-224ENST00000599016 K7EQG2 157 aa16.4■□□□□ 0.22
LTBP4-224ENST00000599016 RGS13O14921 159 aa16.4■□□□□ 0.22
LTBP4-224ENST00000599016 IFNA1P01562 189 aa16.4■□□□□ 0.22
LTBP4-224ENST00000599016 NMBP08949 121 aa16.4■□□□□ 0.22
LTBP4-224ENST00000599016 LYPD6BQ8NI32 183 aa16.4■□□□□ 0.22
LTBP4-224ENST00000599016 PCNPQ8WW12 178 aaKnown RBP16.4■□□□□ 0.22
LTBP4-224ENST00000599016 AAMDCQ9H7C9 122 aa16.4■□□□□ 0.22
LTBP4-224ENST00000599016 CLEC5AQ9NY25 188 aa16.4■□□□□ 0.22
LTBP4-224ENST00000599016 ISLRO14498 428 aa16.39■□□□□ 0.21
LTBP4-224ENST00000599016 OXLD1Q5BKU9 147 aa16.39■□□□□ 0.21
LTBP4-224ENST00000599016 LYPD1Q8N2G4 141 aa16.39■□□□□ 0.21
LTBP4-224ENST00000599016 ZNF331Q9NQX6 463 aaPredicted RBP16.39■□□□□ 0.21
LTBP4-224ENST00000599016 SORL1Q92673 2214 aa16.39■□□□□ 0.21
LTBP4-224ENST00000599016 SLC17A3O00476 420 aa16.38■□□□□ 0.21
LTBP4-224ENST00000599016 SOCS3O14543 225 aa16.38■□□□□ 0.21
LTBP4-224ENST00000599016 NDUFB4O95168 129 aa16.38■□□□□ 0.21
LTBP4-224ENST00000599016 SNRPD3P62318 126 aaKnown RBP16.38■□□□□ 0.21
LTBP4-224ENST00000599016 RANP62826 216 aaKnown RBP16.38■□□□□ 0.21
LTBP4-224ENST00000599016 CCL20P78556 96 aa16.38■□□□□ 0.21
LTBP4-224ENST00000599016 CLLU1Q5K131 121 aa16.38■□□□□ 0.21
LTBP4-224ENST00000599016 MANBALQ9NQG1 85 aa16.38■□□□□ 0.21
LTBP4-224ENST00000599016 ARL2-SNX15V9GYD0 113 aa16.38■□□□□ 0.21
LTBP4-224ENST00000599016 A0A1W2PRE2 83 aa16.37■□□□□ 0.21
LTBP4-224ENST00000599016 CMC4P56277 68 aaPredicted RBP16.37■□□□□ 0.21
LTBP4-224ENST00000599016 UBE2G2P60604 165 aa16.37■□□□□ 0.21
LTBP4-224ENST00000599016 Q9H3A6 140 aa16.37■□□□□ 0.21
LTBP4-224ENST00000599016 GNG13Q9P2W3 67 aa16.37■□□□□ 0.21
LTBP4-224ENST00000599016 PMS2P11Q13670 270 aa16.36■□□□□ 0.21
LTBP4-224ENST00000599016 BEAN1Q3B7T3 259 aa16.36■□□□□ 0.21
LTBP4-224ENST00000599016 NKX6-2Q9C056 277 aaPredicted RBP16.36■□□□□ 0.21
LTBP4-224ENST00000599016 OTORQ9NRC9 128 aa16.36■□□□□ 0.21
LTBP4-224ENST00000599016 PRELID1Q9Y255 219 aa16.36■□□□□ 0.21
LTBP4-224ENST00000599016 ZNF256Q9Y2P7 627 aaPredicted RBP16.36■□□□□ 0.21
LTBP4-224ENST00000599016 TRAV8-2A0A0B4J237 113 aa16.35■□□□□ 0.21
LTBP4-224ENST00000599016 PAGE4O60829 102 aa16.35■□□□□ 0.21
LTBP4-224ENST00000599016 TAGLN2P37802 199 aaKnown RBP16.35■□□□□ 0.21
LTBP4-224ENST00000599016 LINC00052Q96N35 136 aa16.35■□□□□ 0.21
LTBP4-224ENST00000599016 PRKDCP78527 4128 aaKnown RBP16.34■□□□□ 0.21
LTBP4-224ENST00000599016 PGPA6NDG6 321 aa16.34■□□□□ 0.21
LTBP4-224ENST00000599016 FAM74A7A6NL05 159 aa16.34■□□□□ 0.21
LTBP4-224ENST00000599016 ZNF688P0C7X2 276 aa16.34■□□□□ 0.21
LTBP4-224ENST00000599016 ICAM4Q14773 271 aa16.34■□□□□ 0.21
LTBP4-224ENST00000599016 PSG3Q16557 428 aa16.34■□□□□ 0.21
LTBP4-224ENST00000599016 SAMD5Q5TGI4 173 aa16.34■□□□□ 0.21
LTBP4-224ENST00000599016 CST9LP1Q5W188 147 aa16.34■□□□□ 0.21
LTBP4-224ENST00000599016 IGFL4Q6B9Z1 124 aa16.34■□□□□ 0.21
LTBP4-224ENST00000599016 EXOC3-AS1Q8N2X6 119 aa16.34■□□□□ 0.21
LTBP4-224ENST00000599016 YTHDF2Q9Y5A9 579 aaKnown RBP16.34■□□□□ 0.21
LTBP4-224ENST00000599016 SUMO1P63165 101 aaKnown RBP16.33■□□□□ 0.2
LTBP4-224ENST00000599016 PSMG4Q5JS54 123 aa16.33■□□□□ 0.2
LTBP4-224ENST00000599016 GTSCR1Q86UQ5 136 aa16.33■□□□□ 0.2
LTBP4-224ENST00000599016 FAM24BQ8N5W8 94 aa16.33■□□□□ 0.2
LTBP4-224ENST00000599016 RNF182Q8N6D2 247 aa16.33■□□□□ 0.2
LTBP4-224ENST00000599016 CMTM2Q8TAZ6 248 aa16.33■□□□□ 0.2
LTBP4-224ENST00000599016 MRPL53Q96EL3 112 aaKnown RBP16.33■□□□□ 0.2
LTBP4-224ENST00000599016 G3V4G9 280 aa16.32■□□□□ 0.2
LTBP4-224ENST00000599016 HLA-DMBP28068 263 aa16.32■□□□□ 0.2
LTBP4-224ENST00000599016 CSN1S1P47710 185 aa16.32■□□□□ 0.2
LTBP4-224ENST00000599016 EGFEM1PQ0D2K5 195 aa16.32■□□□□ 0.2
LTBP4-224ENST00000599016 HAGHQ16775 308 aa16.32■□□□□ 0.2
LTBP4-224ENST00000599016 ZNF738Q8NE65 137 aa16.32■□□□□ 0.2
LTBP4-224ENST00000599016 RXFP4Q8TDU9 374 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms