RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 VSIRQ9H7M9 311 aa11.89□□□□□ -0.51
SHKBP1-215ENST00000597649 DOK5Q9P104 306 aa11.89□□□□□ -0.51
SHKBP1-215ENST00000597649 IGHV3-66A0A0C4DH42 116 aa11.88□□□□□ -0.51
SHKBP1-215ENST00000597649 PFDN1O60925 122 aa11.88□□□□□ -0.51
SHKBP1-215ENST00000597649 CRYBB3P26998 211 aa11.88□□□□□ -0.51
SHKBP1-215ENST00000597649 RPL29P47914 159 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-215ENST00000597649 B2MP61769 119 aa11.88□□□□□ -0.51
SHKBP1-215ENST00000597649 ZNF345Q14585 488 aa11.88□□□□□ -0.51
SHKBP1-215ENST00000597649 OPCMLQ14982 345 aa11.88□□□□□ -0.51
SHKBP1-215ENST00000597649 ZFP69Q49AA0 526 aa11.88□□□□□ -0.51
SHKBP1-215ENST00000597649 PXDC1Q5TGL8 231 aa11.88□□□□□ -0.51
SHKBP1-215ENST00000597649 KCNRGQ8N5I3 272 aa11.88□□□□□ -0.51
SHKBP1-215ENST00000597649 ARPC5LQ9BPX5 153 aa11.88□□□□□ -0.51
SHKBP1-215ENST00000597649 PARD6GQ9BYG4 376 aaPredicted RBP11.88□□□□□ -0.51
SHKBP1-215ENST00000597649 SLC39A9Q9NUM3 307 aa11.88□□□□□ -0.51
SHKBP1-215ENST00000597649 PXMP4Q9Y6I8 212 aa11.88□□□□□ -0.51
SHKBP1-215ENST00000597649 X6R8D5 127 aa11.88□□□□□ -0.51
SHKBP1-215ENST00000597649 TRAV10A0A0B4J240 114 aa11.87□□□□□ -0.51
SHKBP1-215ENST00000597649 KANTRA0A1W2PQU2 76 aa11.87□□□□□ -0.51
SHKBP1-215ENST00000597649 PRSS29PA6NIE9 313 aa11.87□□□□□ -0.51
SHKBP1-215ENST00000597649 ZNF705EA8MWA4 302 aaPredicted RBP11.87□□□□□ -0.51
SHKBP1-215ENST00000597649 COX7A2P2O60397 106 aa11.87□□□□□ -0.51
SHKBP1-215ENST00000597649 SCRT1Q9BWW7 348 aa11.87□□□□□ -0.51
SHKBP1-215ENST00000597649 HIGD1AQ9Y241 93 aa11.87□□□□□ -0.51
SHKBP1-215ENST00000597649 M0R2N4 97 aa11.86□□□□□ -0.51
SHKBP1-215ENST00000597649 DNASE2O00115 360 aaPredicted RBP11.86□□□□□ -0.51
SHKBP1-215ENST00000597649 CXCL2P19875 107 aa11.86□□□□□ -0.51
SHKBP1-215ENST00000597649 C4BPBP20851 252 aa11.86□□□□□ -0.51
SHKBP1-215ENST00000597649 PLP1P60201 277 aa11.86□□□□□ -0.51
SHKBP1-215ENST00000597649 RPL11P62913 178 aaKnown RBP11.86□□□□□ -0.51
SHKBP1-215ENST00000597649 CD300CQ08708 224 aa11.86□□□□□ -0.51
SHKBP1-215ENST00000597649 TRPT1Q86TN4 253 aaKnown RBP11.86□□□□□ -0.51
SHKBP1-215ENST00000597649 STHQ8IWL8 128 aa11.86□□□□□ -0.51
SHKBP1-215ENST00000597649 HSD17B11Q8NBQ5 300 aa11.86□□□□□ -0.51
SHKBP1-215ENST00000597649 OR1L4Q8NGR5 311 aa11.86□□□□□ -0.51
SHKBP1-215ENST00000597649 RSG1Q9BU20 258 aa11.86□□□□□ -0.51
SHKBP1-215ENST00000597649 CELA1Q9UNI1 258 aa11.86□□□□□ -0.51
SHKBP1-215ENST00000597649 CD5P06127 495 aa11.85□□□□□ -0.51
SHKBP1-215ENST00000597649 MIFP14174 115 aa11.85□□□□□ -0.51
SHKBP1-215ENST00000597649 C12orf74Q32Q52 190 aa11.85□□□□□ -0.51
SHKBP1-215ENST00000597649 C10orf113Q5VZT2 155 aa11.85□□□□□ -0.51
SHKBP1-215ENST00000597649 RPL7L1Q6DKI1 246 aaKnown RBP11.85□□□□□ -0.51
SHKBP1-215ENST00000597649 TMUB2Q71RG4 321 aa11.85□□□□□ -0.51
SHKBP1-215ENST00000597649 ZNF767PQ75MW2 155 aa11.85□□□□□ -0.51
SHKBP1-215ENST00000597649 POM121L12Q8N7R1 296 aa11.85□□□□□ -0.51
SHKBP1-215ENST00000597649 CSNK1G2-AS1Q8NCQ2 148 aa11.85□□□□□ -0.51
SHKBP1-215ENST00000597649 PFDN5Q99471 154 aa11.85□□□□□ -0.51
SHKBP1-215ENST00000597649 DNAJC4Q9NNZ3 241 aa11.85□□□□□ -0.51
SHKBP1-215ENST00000597649 RNF24Q9Y225 148 aa11.85□□□□□ -0.51
SHKBP1-215ENST00000597649 U3KQE9 123 aa11.85□□□□□ -0.51
SHKBP1-215ENST00000597649 TRAV2A0A0B4J234 112 aa11.84□□□□□ -0.51
SHKBP1-215ENST00000597649 KNCNA6PVL3 124 aa11.84□□□□□ -0.51
SHKBP1-215ENST00000597649 BCL2L11O43521 198 aa11.84□□□□□ -0.51
SHKBP1-215ENST00000597649 FFAR4Q5NUL3 377 aa11.84□□□□□ -0.51
SHKBP1-215ENST00000597649 ARV1Q9H2C2 271 aa11.84□□□□□ -0.51
SHKBP1-215ENST00000597649 CLEC5AQ9NY25 188 aa11.84□□□□□ -0.51
SHKBP1-215ENST00000597649 HELTA6NFD8 242 aa11.83□□□□□ -0.52
SHKBP1-215ENST00000597649 BUB3O43684 328 aa11.83□□□□□ -0.52
SHKBP1-215ENST00000597649 EIF5AP63241 154 aaKnown RBP11.83□□□□□ -0.52
SHKBP1-215ENST00000597649 C1orf194Q5T5A4 169 aa11.83□□□□□ -0.52
SHKBP1-215ENST00000597649 C16orf54Q6UWD8 224 aa11.83□□□□□ -0.52
SHKBP1-215ENST00000597649 PATE2Q6UY27 113 aa11.83□□□□□ -0.52
SHKBP1-215ENST00000597649 OR8I2Q8N0Y5 310 aa11.83□□□□□ -0.52
SHKBP1-215ENST00000597649 GNPNAT1Q96EK6 184 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-215ENST00000597649 ZNF471Q9BX82 626 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-215ENST00000597649 SLC25A39Q9BZJ4 359 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-215ENST00000597649 SLC25A22Q9H936 323 aa11.83□□□□□ -0.52
SHKBP1-215ENST00000597649 TIMM9Q9Y5J7 89 aa11.83□□□□□ -0.52
SHKBP1-215ENST00000597649 DEFB131BA0A096LNP1 70 aa11.82□□□□□ -0.52
SHKBP1-215ENST00000597649 ZNF98A6NK75 572 aa11.82□□□□□ -0.52
SHKBP1-215ENST00000597649 K7EQG2 157 aa11.82□□□□□ -0.52
SHKBP1-215ENST00000597649 AMBPP02760 352 aa11.82□□□□□ -0.52
SHKBP1-215ENST00000597649 ATP6V0CP27449 155 aa11.82□□□□□ -0.52
SHKBP1-215ENST00000597649 LGALSLQ3ZCW2 172 aaPredicted RBP11.82□□□□□ -0.52
SHKBP1-215ENST00000597649 LINC00305Q7Z4B0 112 aa11.82□□□□□ -0.52
SHKBP1-215ENST00000597649 UHRF2Q96PU4 802 aa11.82□□□□□ -0.52
SHKBP1-215ENST00000597649 SHANK2-AS3Q9BTD1 123 aa11.82□□□□□ -0.52
SHKBP1-215ENST00000597649 CYTL1Q9NRR1 136 aa11.82□□□□□ -0.52
SHKBP1-215ENST00000597649 DNAH5Q8TE73 4624 aa11.82□□□□□ -0.52
SHKBP1-215ENST00000597649 H3BRN7 92 aa11.81□□□□□ -0.52
SHKBP1-215ENST00000597649 SPP1P10451 314 aa11.81□□□□□ -0.52
SHKBP1-215ENST00000597649 ACOT6Q3I5F7 207 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-215ENST00000597649 TMEM41BQ5BJD5 291 aa11.81□□□□□ -0.52
SHKBP1-215ENST00000597649 MORN3Q6PF18 240 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-215ENST00000597649 TMEM37Q8WXS4 190 aa11.81□□□□□ -0.52
SHKBP1-215ENST00000597649 PSMG3Q9BT73 122 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-215ENST00000597649 APOBP04114 4563 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-215ENST00000597649 ZNF688P0C7X2 276 aa11.8□□□□□ -0.52
SHKBP1-215ENST00000597649 GALR1P47211 349 aa11.8□□□□□ -0.52
SHKBP1-215ENST00000597649 SERF2P84101 59 aa11.8□□□□□ -0.52
SHKBP1-215ENST00000597649 GCSAMLQ5JQS6 135 aa11.8□□□□□ -0.52
SHKBP1-215ENST00000597649 SIGLEC15Q6ZMC9 328 aa11.8□□□□□ -0.52
SHKBP1-215ENST00000597649 ZNF575Q86XF7 245 aa11.8□□□□□ -0.52
SHKBP1-215ENST00000597649 OR2G3Q8NGZ4 309 aa11.8□□□□□ -0.52
SHKBP1-215ENST00000597649 GLMPQ8WWB7 406 aa11.8□□□□□ -0.52
SHKBP1-215ENST00000597649 GPR82Q96P67 336 aa11.8□□□□□ -0.52
SHKBP1-215ENST00000597649 HERC1Q15751 4861 aa11.8□□□□□ -0.52
SHKBP1-215ENST00000597649 MBP02144 154 aa11.79□□□□□ -0.52
SHKBP1-215ENST00000597649 P0DMU3 169 aa11.79□□□□□ -0.52
SHKBP1-215ENST00000597649 FAM231AP0DMU4 169 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms