RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 RLN2P04090 185 aa6.31□□□□□ -1.4
APOC1-207ENST00000592176 RPL7P18124 248 aaKnown RBP6.31□□□□□ -1.4
APOC1-207ENST00000592176 HOXA5P20719 270 aa6.31□□□□□ -1.4
APOC1-207ENST00000592176 FUSP35637 526 aaKnown RBP eCLIP6.31□□□□□ -1.4
APOC1-207ENST00000592176 CDKN1BP46527 198 aa6.31□□□□□ -1.4
APOC1-207ENST00000592176 LINC00315P59091 139 aa6.31□□□□□ -1.4
APOC1-207ENST00000592176 RAP2BP61225 183 aa6.31□□□□□ -1.4
APOC1-207ENST00000592176 SRPXP78539 464 aa6.31□□□□□ -1.4
APOC1-207ENST00000592176 RNASE8Q8TDE3 154 aaKnown RBP6.31□□□□□ -1.4
APOC1-207ENST00000592176 CCDC59Q9P031 241 aaKnown RBP6.31□□□□□ -1.4
APOC1-207ENST00000592176 SCP2D1Q9UJQ7 156 aa6.31□□□□□ -1.4
APOC1-207ENST00000592176 H3BRN7 92 aa6.3□□□□□ -1.4
APOC1-207ENST00000592176 WRBO00258 174 aa6.3□□□□□ -1.4
APOC1-207ENST00000592176 RGS5O15539 181 aa6.3□□□□□ -1.4
APOC1-207ENST00000592176 HYPMO75409 117 aa6.3□□□□□ -1.4
APOC1-207ENST00000592176 IFNA5P01569 189 aa6.3□□□□□ -1.4
APOC1-207ENST00000592176 IL5P05113 134 aa6.3□□□□□ -1.4
APOC1-207ENST00000592176 PRB4P10163 310 aaPredicted RBP6.3□□□□□ -1.4
APOC1-207ENST00000592176 CXCL3P19876 107 aa6.3□□□□□ -1.4
APOC1-207ENST00000592176 Q5VSD8 79 aa6.3□□□□□ -1.4
APOC1-207ENST00000592176 CDPF1Q6NVV7 123 aa6.3□□□□□ -1.4
APOC1-207ENST00000592176 Q6ZRN7 208 aaPredicted RBP6.3□□□□□ -1.4
APOC1-207ENST00000592176 LINC00612Q8N6U2 182 aa6.3□□□□□ -1.4
APOC1-207ENST00000592176 LRTM2Q8N967 370 aa6.3□□□□□ -1.4
APOC1-207ENST00000592176 TRIM63Q969Q1 353 aa6.3□□□□□ -1.4
APOC1-207ENST00000592176 RPUSD4Q96CM3 377 aaKnown RBP6.3□□□□□ -1.4
APOC1-207ENST00000592176 CIB3Q96Q77 187 aaPredicted RBP6.3□□□□□ -1.4
APOC1-207ENST00000592176 C20orf144Q9BQM9 153 aa6.3□□□□□ -1.4
APOC1-207ENST00000592176 SHANK2-AS3Q9BTD1 123 aa6.3□□□□□ -1.4
APOC1-207ENST00000592176 SLIRPQ9GZT3 109 aaKnown RBP6.3□□□□□ -1.4
APOC1-207ENST00000592176 HIGD1AQ9Y241 93 aa6.3□□□□□ -1.4
APOC1-207ENST00000592176 DUXBA0A1W2PPF3 345 aa6.29□□□□□ -1.4
APOC1-207ENST00000592176 A6NHS1 94 aa6.29□□□□□ -1.4
APOC1-207ENST00000592176 SNURFLB1AK76 121 aa6.29□□□□□ -1.4
APOC1-207ENST00000592176 SIVA1O15304 175 aa6.29□□□□□ -1.4
APOC1-207ENST00000592176 OR5G3P0C626 314 aa6.29□□□□□ -1.4
APOC1-207ENST00000592176 SLC25A6P12236 298 aa6.29□□□□□ -1.4
APOC1-207ENST00000592176 ANXA7P20073 488 aaKnown RBP6.29□□□□□ -1.4
APOC1-207ENST00000592176 S100A5P33763 92 aa6.29□□□□□ -1.4
APOC1-207ENST00000592176 ERVFC1-1P60608 527 aa6.29□□□□□ -1.4
APOC1-207ENST00000592176 AKR1C1Q04828 323 aa6.29□□□□□ -1.4
APOC1-207ENST00000592176 IL18Q14116 193 aa6.29□□□□□ -1.4
APOC1-207ENST00000592176 SPANXN5Q5MJ07 72 aa6.29□□□□□ -1.4
APOC1-207ENST00000592176 LINC00299Q6ZSB3 139 aa6.29□□□□□ -1.4
APOC1-207ENST00000592176 CYP2G1PQ6ZSU1 146 aa6.29□□□□□ -1.4
APOC1-207ENST00000592176 S100A7AQ86SG5 101 aa6.29□□□□□ -1.4
APOC1-207ENST00000592176 DIRAS2Q96HU8 199 aa6.29□□□□□ -1.4
APOC1-207ENST00000592176 VPS13BQ7Z7G8 4022 aa6.29□□□□□ -1.4
APOC1-207ENST00000592176 A0A087X0K7 114 aa6.28□□□□□ -1.4
APOC1-207ENST00000592176 A0A096LPF7 62 aa6.28□□□□□ -1.4
APOC1-207ENST00000592176 FAM229AH3BQW9 127 aa6.28□□□□□ -1.4
APOC1-207ENST00000592176 SYNGR2O43760 224 aa6.28□□□□□ -1.4
APOC1-207ENST00000592176 SMR3BP02814 79 aaPredicted RBP6.28□□□□□ -1.4
APOC1-207ENST00000592176 KIR3DS1Q14943 382 aa6.28□□□□□ -1.4
APOC1-207ENST00000592176 MCUBQ9NWR8 336 aa6.28□□□□□ -1.4
APOC1-207ENST00000592176 MDFICQ9P1T7 246 aa6.28□□□□□ -1.4
APOC1-207ENST00000592176 STRAPQ9Y3F4 350 aaKnown RBP6.28□□□□□ -1.4
APOC1-207ENST00000592176 SMCO3A2RU48 225 aa6.27□□□□□ -1.41
APOC1-207ENST00000592176 H3BMQ9 156 aa6.27□□□□□ -1.41
APOC1-207ENST00000592176 TNFSF8P32971 234 aa6.27□□□□□ -1.41
APOC1-207ENST00000592176 PLP1P60201 277 aa6.27□□□□□ -1.41
APOC1-207ENST00000592176 KRTAP10-1P60331 282 aa6.27□□□□□ -1.41
APOC1-207ENST00000592176 SELENOTP62341 195 aa6.27□□□□□ -1.41
APOC1-207ENST00000592176 DAZ2Q13117 558 aaKnown RBP6.27□□□□□ -1.41
APOC1-207ENST00000592176 TMEM128Q5BJH2 165 aa6.27□□□□□ -1.41
APOC1-207ENST00000592176 TMED4Q7Z7H5 227 aa6.27□□□□□ -1.41
APOC1-207ENST00000592176 CCDC190Q86UF4 302 aa6.27□□□□□ -1.41
APOC1-207ENST00000592176 NFE4Q86UQ8 179 aa6.27□□□□□ -1.41
APOC1-207ENST00000592176 VSIG2Q96IQ7 327 aa6.27□□□□□ -1.41
APOC1-207ENST00000592176 TMPRSS5Q9H3S3 457 aa6.27□□□□□ -1.41
APOC1-207ENST00000592176 RNF24Q9Y225 148 aa6.27□□□□□ -1.41
APOC1-207ENST00000592176 TNFRSF18Q9Y5U5 241 aa6.27□□□□□ -1.41
APOC1-207ENST00000592176 DMBT1Q9UGM3 2413 aaPredicted RBP6.26□□□□□ -1.41
APOC1-207ENST00000592176 TRGV2A0A075B6R0 118 aa6.26□□□□□ -1.41
APOC1-207ENST00000592176 TRAV9-2A0A087WT02 112 aa6.26□□□□□ -1.41
APOC1-207ENST00000592176 TRAV12-3A0A0B4J271 114 aa6.26□□□□□ -1.41
APOC1-207ENST00000592176 PMS2P5A8MQ11 134 aa6.26□□□□□ -1.41
APOC1-207ENST00000592176 NXPH4O95158 308 aa6.26□□□□□ -1.41
APOC1-207ENST00000592176 SNRPCP09234 159 aaKnown RBP6.26□□□□□ -1.41
APOC1-207ENST00000592176 LINC00869P0C866 280 aa6.26□□□□□ -1.41
APOC1-207ENST00000592176 ICAM4Q14773 271 aa6.26□□□□□ -1.41
APOC1-207ENST00000592176 GFI1BQ5VTD9 330 aa6.26□□□□□ -1.41
APOC1-207ENST00000592176 PATE2Q6UY27 113 aa6.26□□□□□ -1.41
APOC1-207ENST00000592176 Q6ZTI0 123 aa6.26□□□□□ -1.41
APOC1-207ENST00000592176 ACOT7LQ6ZUV0 252 aa6.26□□□□□ -1.41
APOC1-207ENST00000592176 PARD6GQ9BYG4 376 aaPredicted RBP6.26□□□□□ -1.41
APOC1-207ENST00000592176 ARL6Q9H0F7 186 aa6.26□□□□□ -1.41
APOC1-207ENST00000592176 RBM38Q9H0Z9 239 aaKnown RBP6.26□□□□□ -1.41
APOC1-207ENST00000592176 ZNF331Q9NQX6 463 aaPredicted RBP6.26□□□□□ -1.41
APOC1-207ENST00000592176 V9GYH0 126 aa6.26□□□□□ -1.41
APOC1-207ENST00000592176 FAT1Q14517 4588 aa6.25□□□□□ -1.41
APOC1-207ENST00000592176 A0A087WTM6 91 aa6.25□□□□□ -1.41
APOC1-207ENST00000592176 PRAC2D3DTV9 90 aa6.25□□□□□ -1.41
APOC1-207ENST00000592176 H3BP45 60 aa6.25□□□□□ -1.41
APOC1-207ENST00000592176 J3KRW8 73 aa6.25□□□□□ -1.41
APOC1-207ENST00000592176 J3QL48 77 aa6.25□□□□□ -1.41
APOC1-207ENST00000592176 MRPS12O15235 138 aaKnown RBP6.25□□□□□ -1.41
APOC1-207ENST00000592176 PAX4O43316 350 aa6.25□□□□□ -1.41
APOC1-207ENST00000592176 HOXB5P09067 269 aa6.25□□□□□ -1.41
APOC1-207ENST00000592176 CXCL2P19875 107 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms