RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 G3V318 75 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 IGLV1-47P01700 117 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 SFTA3P0C7M3 94 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 LGALS3P17931 250 aaKnown RBP4.97□□□□□ -1.61
SMAD4-212ENST00000591126 CBLN1P23435 193 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 QRFPP83859 136 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 TFF3Q07654 80 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 FHL1Q13642 323 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 MEIG1Q5JSS6 88 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 LAMTOR2Q9Y2Q5 125 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 SLC25A20O43772 301 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 DEFB130BP0DP73 79 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 DEFB130AP0DP74 79 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 MIFP14174 115 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 ZFP36P26651 326 aaKnown RBP4.97□□□□□ -1.61
SMAD4-212ENST00000591126 CRYBB3P26998 211 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 FAM3BP58499 235 aaPredicted RBP4.97□□□□□ -1.61
SMAD4-212ENST00000591126 IQCJQ1A5X6 159 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 TDRG1Q3Y452 100 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 SCGB1D4Q6XE38 83 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 Q8N9W7 124 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 NDUFAF3Q9BU61 184 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 ZNF503-AS2A6NEH8 195 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 LYRM9A8MSI8 78 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 NMBP08949 121 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 AZU1P20160 251 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 TCTAP57738 103 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 EBI3Q14213 229 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 NDUFB4O95168 129 aa4.96□□□□□ -1.61
SMAD4-212ENST00000591126 CRYGCP07315 174 aa4.96□□□□□ -1.61
SMAD4-212ENST00000591126 CCL20P78556 96 aa4.96□□□□□ -1.61
SMAD4-212ENST00000591126 IFITM2Q01629 132 aa4.96□□□□□ -1.61
SMAD4-212ENST00000591126 RASL11AQ6T310 242 aa4.96□□□□□ -1.61
SMAD4-212ENST00000591126 TMEM14EPQ6UXP3 125 aa4.96□□□□□ -1.61
SMAD4-212ENST00000591126 TRPT1Q86TN4 253 aaKnown RBP4.96□□□□□ -1.61
SMAD4-212ENST00000591126 C11orf42Q8N5U0 333 aa4.96□□□□□ -1.61
SMAD4-212ENST00000591126 HIVEP2P31629 2446 aa4.96□□□□□ -1.61
SMAD4-212ENST00000591126 CREBBPQ92793 2442 aa4.96□□□□□ -1.61
SMAD4-212ENST00000591126 IGHV7-81A0A0B4J1V7 117 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 M0R3E3 92 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 VCYO14598 125 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 LYL1P12980 280 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 Q6ZSV7 163 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 C11orf45Q8TAV5 145 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 VCX2Q9H322 139 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 LY96Q9Y6Y9 160 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 SDK2Q58EX2 2172 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 TRAV10A0A0B4J240 114 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 TRBV7-9A0A0J9YWB2 115 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 CGB3P0DN86 165 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 PTTG1IPP53801 180 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 CKS1BP61024 79 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 KIAA0141Q14154 515 aaPredicted RBP4.96□□□□□ -1.62
SMAD4-212ENST00000591126 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.96□□□□□ -1.62
SMAD4-212ENST00000591126 OR10AG1Q8NH19 301 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 CYSLTR1Q9Y271 337 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 SRSF1Q07955 248 aaKnown RBP eCLIP4.96□□□□□ -1.62
SMAD4-212ENST00000591126 PMS2P11Q13670 270 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 THAP8Q8NA92 274 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 ZNF502Q8TBZ5 544 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 DNAJC30Q96LL9 226 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 XCL2Q9UBD3 114 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 DNAH12Q6ZR08 3092 aa4.96□□□□□ -1.62
SMAD4-212ENST00000591126 CEP192Q8TEP8 1941 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 C2orf70A6NJV1 201 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 ZNF561-AS1K7EIQ3 104 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 SNRPEP62304 92 aaKnown RBP4.95□□□□□ -1.62
SMAD4-212ENST00000591126 JOSD1Q15040 202 aaPredicted RBP4.95□□□□□ -1.62
SMAD4-212ENST00000591126 ATP5L2Q7Z4Y8 100 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 ZNF295-AS1Q8N0V1 137 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 IGF2BP2-AS1Q96M15 143 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 DNAJC13O75165 2243 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 PTPRSQ13332 1948 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 HTTP42858 3142 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 M0R2P5 195 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 MDKP21741 143 aaPredicted RBP4.95□□□□□ -1.62
SMAD4-212ENST00000591126 LINC00473A8K010 186 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 F8VVB4 439 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 F8VWA3 439 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 H0Y8G0 127 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 ERCC8Q13216 396 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 ORMDL3Q8N138 153 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 TMEM75Q8N9X5 138 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 ANAPC10Q9UM13 185 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 MDC1Q14676 2089 aaKnown RBP4.95□□□□□ -1.62
SMAD4-212ENST00000591126 A0A0A6YYD4 124 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 TRAV8-1A0A0A6YYK1 113 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 M0R2Z0 102 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 C5orf24Q7Z6I8 188 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 Q8N7P7 452 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 OSTCQ9NRP0 149 aa4.95□□□□□ -1.62
SMAD4-212ENST00000591126 H3BRN7 92 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 PLA2G10O15496 165 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 STAG3L3P0CL85 134 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 RUNX1Q01196 453 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 PRB3Q04118 309 aaPredicted RBP4.94□□□□□ -1.62
SMAD4-212ENST00000591126 C10orf55Q5SWW7 151 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 TRAV12-3A0A0B4J271 114 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 TMEM218A2RU14 115 aa4.94□□□□□ -1.62
SMAD4-212ENST00000591126 PMS2P5A8MQ11 134 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms