RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 HRH4Q9H3N8 390 aa11.53□□□□□ -0.56
RPRD1A-208ENST00000589050 MAP6D1Q9H9H5 199 aa11.53□□□□□ -0.56
RPRD1A-208ENST00000589050 PLA2G2EQ9NZK7 142 aa11.53□□□□□ -0.56
RPRD1A-208ENST00000589050 NOTCH3Q9UM47 2321 aa11.52□□□□□ -0.57
RPRD1A-208ENST00000589050 UMAD1C9J7I0 102 aa11.52□□□□□ -0.57
RPRD1A-208ENST00000589050 K7EIL1 84 aa11.52□□□□□ -0.57
RPRD1A-208ENST00000589050 OR10J4P0C629 311 aa11.52□□□□□ -0.57
RPRD1A-208ENST00000589050 HIST1H1EP10412 219 aaKnown RBP11.52□□□□□ -0.57
RPRD1A-208ENST00000589050 PSMB3P49720 205 aa11.52□□□□□ -0.57
RPRD1A-208ENST00000589050 DEFB131AP59861 70 aa11.52□□□□□ -0.57
RPRD1A-208ENST00000589050 DEFA6Q01524 100 aa11.52□□□□□ -0.57
RPRD1A-208ENST00000589050 GUK1Q16774 197 aa11.52□□□□□ -0.57
RPRD1A-208ENST00000589050 PSMG4Q5JS54 123 aa11.52□□□□□ -0.57
RPRD1A-208ENST00000589050 LCN15Q6UWW0 184 aa11.52□□□□□ -0.57
RPRD1A-208ENST00000589050 SSX7Q7RTT5 188 aa11.52□□□□□ -0.57
RPRD1A-208ENST00000589050 RNF141Q8WVD5 230 aa11.52□□□□□ -0.57
RPRD1A-208ENST00000589050 ZNF503Q96F45 646 aa11.52□□□□□ -0.57
RPRD1A-208ENST00000589050 FAM110AQ9BQ89 295 aa11.52□□□□□ -0.57
RPRD1A-208ENST00000589050 C19orf73Q9NVV2 129 aa11.52□□□□□ -0.57
RPRD1A-208ENST00000589050 ZNF586Q9NXT0 402 aa11.52□□□□□ -0.57
RPRD1A-208ENST00000589050 CTXND1A0A1B0GTU2 59 aa11.51□□□□□ -0.57
RPRD1A-208ENST00000589050 ISLRO14498 428 aa11.51□□□□□ -0.57
RPRD1A-208ENST00000589050 STAG3L2P0CL84 134 aa11.51□□□□□ -0.57
RPRD1A-208ENST00000589050 STAG3L3P0CL85 134 aa11.51□□□□□ -0.57
RPRD1A-208ENST00000589050 UBE2L3P68036 154 aaKnown RBP11.51□□□□□ -0.57
RPRD1A-208ENST00000589050 ZNF726P1Q15940 193 aa11.51□□□□□ -0.57
RPRD1A-208ENST00000589050 IGFL4Q6B9Z1 124 aa11.51□□□□□ -0.57
RPRD1A-208ENST00000589050 PQLC2Q6ZP29 291 aa11.51□□□□□ -0.57
RPRD1A-208ENST00000589050 APRG1Q8IVJ8 170 aa11.51□□□□□ -0.57
RPRD1A-208ENST00000589050 DEFB125Q8N687 156 aa11.51□□□□□ -0.57
RPRD1A-208ENST00000589050 FAM213BQ8TBF2 198 aa11.51□□□□□ -0.57
RPRD1A-208ENST00000589050 BLNKQ8WV28 456 aa11.51□□□□□ -0.57
RPRD1A-208ENST00000589050 FXYD5Q96DB9 178 aa11.51□□□□□ -0.57
RPRD1A-208ENST00000589050 LINC00052Q96N35 136 aa11.51□□□□□ -0.57
RPRD1A-208ENST00000589050 TRBV19A0A075B6N1 114 aa11.5□□□□□ -0.57
RPRD1A-208ENST00000589050 TRAV8-2A0A0B4J237 113 aa11.5□□□□□ -0.57
RPRD1A-208ENST00000589050 SLC17A3O00476 420 aa11.5□□□□□ -0.57
RPRD1A-208ENST00000589050 NBEAP1P0C6P0 100 aa11.5□□□□□ -0.57
RPRD1A-208ENST00000589050 ARL14EPLP0DKL9 152 aa11.5□□□□□ -0.57
RPRD1A-208ENST00000589050 FHITP49789 147 aa11.5□□□□□ -0.57
RPRD1A-208ENST00000589050 SLC50A1Q9BRV3 221 aa11.5□□□□□ -0.57
RPRD1A-208ENST00000589050 ZNF331Q9NQX6 463 aaPredicted RBP11.5□□□□□ -0.57
RPRD1A-208ENST00000589050 DNAH3Q8TD57 4116 aa11.5□□□□□ -0.57
RPRD1A-208ENST00000589050 CXorf1O96002 111 aa11.49□□□□□ -0.57
RPRD1A-208ENST00000589050 IGHV4-30-4P0DP06 118 aa11.49□□□□□ -0.57
RPRD1A-208ENST00000589050 ZNF124Q15973 351 aa11.49□□□□□ -0.57
RPRD1A-208ENST00000589050 DEFB121Q5J5C9 76 aa11.49□□□□□ -0.57
RPRD1A-208ENST00000589050 DPPA3Q6W0C5 159 aa11.49□□□□□ -0.57
RPRD1A-208ENST00000589050 RNF182Q8N6D2 247 aa11.49□□□□□ -0.57
RPRD1A-208ENST00000589050 MRAPQ8TCY5 172 aa11.49□□□□□ -0.57
RPRD1A-208ENST00000589050 SAT2Q96F10 170 aaPredicted RBP11.49□□□□□ -0.57
RPRD1A-208ENST00000589050 C20orf173Q96LM9 149 aa11.49□□□□□ -0.57
RPRD1A-208ENST00000589050 TUBA4BQ9H853 241 aa11.49□□□□□ -0.57
RPRD1A-208ENST00000589050 SRD5A3Q9H8P0 318 aa11.49□□□□□ -0.57
RPRD1A-208ENST00000589050 MAP1LC3B2A6NCE7 125 aa11.48□□□□□ -0.57
RPRD1A-208ENST00000589050 ZNF253O75346 499 aa11.48□□□□□ -0.57
RPRD1A-208ENST00000589050 NDUFB4O95168 129 aa11.48□□□□□ -0.57
RPRD1A-208ENST00000589050 HLA-DMBP28068 263 aa11.48□□□□□ -0.57
RPRD1A-208ENST00000589050 GCHFRP30047 84 aa11.48□□□□□ -0.57
RPRD1A-208ENST00000589050 PDE6HQ13956 83 aa11.48□□□□□ -0.57
RPRD1A-208ENST00000589050 IQCF2Q8IXL9 164 aa11.48□□□□□ -0.57
RPRD1A-208ENST00000589050 PHYHIPLQ96FC7 376 aa11.48□□□□□ -0.57
RPRD1A-208ENST00000589050 CITED4Q96RK1 184 aa11.48□□□□□ -0.57
RPRD1A-208ENST00000589050 MAP1LC3BQ9GZQ8 125 aa11.48□□□□□ -0.57
RPRD1A-208ENST00000589050 NBEAL1Q6ZS30 2694 aa11.47□□□□□ -0.57
RPRD1A-208ENST00000589050 KNCNA6PVL3 124 aa11.47□□□□□ -0.57
RPRD1A-208ENST00000589050 SULT1A2P50226 295 aa11.47□□□□□ -0.57
RPRD1A-208ENST00000589050 RAB5CP51148 216 aa11.47□□□□□ -0.57
RPRD1A-208ENST00000589050 FGF8P55075 233 aaPredicted RBP11.47□□□□□ -0.57
RPRD1A-208ENST00000589050 PSG9Q00887 426 aa11.47□□□□□ -0.57
RPRD1A-208ENST00000589050 FAM74A1Q5RGS3 127 aa11.47□□□□□ -0.57
RPRD1A-208ENST00000589050 ALKAL2Q6UX46 152 aa11.47□□□□□ -0.57
RPRD1A-208ENST00000589050 PSG3Q16557 428 aa11.46□□□□□ -0.57
RPRD1A-208ENST00000589050 EXOC3-AS1Q8N2X6 119 aa11.46□□□□□ -0.57
RPRD1A-208ENST00000589050 ZNF738Q8NE65 137 aa11.46□□□□□ -0.57
RPRD1A-208ENST00000589050 SFT2D1Q8WV19 159 aa11.46□□□□□ -0.57
RPRD1A-208ENST00000589050 NOTCH1P46531 2555 aa11.45□□□□□ -0.58
RPRD1A-208ENST00000589050 A8MZ25 164 aa11.45□□□□□ -0.58
RPRD1A-208ENST00000589050 H2AFB1P0C5Y9 115 aa11.45□□□□□ -0.58
RPRD1A-208ENST00000589050 DEFB1P60022 68 aa11.45□□□□□ -0.58
RPRD1A-208ENST00000589050 RANP62826 216 aaKnown RBP11.45□□□□□ -0.58
RPRD1A-208ENST00000589050 ACTL10Q5JWF8 245 aa11.45□□□□□ -0.58
RPRD1A-208ENST00000589050 MBD3L1Q8WWY6 194 aa11.45□□□□□ -0.58
RPRD1A-208ENST00000589050 TMPRSS5Q9H3S3 457 aa11.45□□□□□ -0.58
RPRD1A-208ENST00000589050 AAMDCQ9H7C9 122 aa11.45□□□□□ -0.58
RPRD1A-208ENST00000589050 TMEM167BQ9NRX6 74 aa11.45□□□□□ -0.58
RPRD1A-208ENST00000589050 CLEC5AQ9NY25 188 aa11.45□□□□□ -0.58
RPRD1A-208ENST00000589050 A0A1B0GV50 99 aa11.44□□□□□ -0.58
RPRD1A-208ENST00000589050 RBMY1BA6NDE4 496 aaKnown RBP11.44□□□□□ -0.58
RPRD1A-208ENST00000589050 RBMY1EA6NEQ0 496 aaKnown RBP11.44□□□□□ -0.58
RPRD1A-208ENST00000589050 F6UB75 175 aa11.44□□□□□ -0.58
RPRD1A-208ENST00000589050 RBMY1DP0C7P1 496 aaKnown RBP11.44□□□□□ -0.58
RPRD1A-208ENST00000589050 FRMD6-AS1P0C7T7 363 aa11.44□□□□□ -0.58
RPRD1A-208ENST00000589050 PRB4P10163 310 aaPredicted RBP11.44□□□□□ -0.58
RPRD1A-208ENST00000589050 ICAM4Q14773 271 aa11.44□□□□□ -0.58
RPRD1A-208ENST00000589050 EBLN2Q6P2I7 272 aa11.44□□□□□ -0.58
RPRD1A-208ENST00000589050 FOXI2Q6ZQN5 318 aa11.44□□□□□ -0.58
RPRD1A-208ENST00000589050 STHQ8IWL8 128 aa11.44□□□□□ -0.58
RPRD1A-208ENST00000589050 LYPD1Q8N2G4 141 aa11.44□□□□□ -0.58
RPRD1A-208ENST00000589050 SUN5Q8TC36 379 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms