RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 PAIP2BQ9ULR5 123 aaKnown RBP9.47□□□□□ -0.89
CLPTM1-208ENST00000588274 SRRM2Q9UQ35 2752 aaKnown RBP9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 H7BYZ3 331 aa9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 WRBO00258 174 aa9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 CCNKO75909 580 aa9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 LINC00869P0C866 280 aa9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 HTN1P15515 57 aa9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 RHOBP62745 196 aa9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 DLK1P80370 383 aa9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 AKR1C1Q04828 323 aa9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 TMEM128Q5BJH2 165 aa9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 OR10J6PQ8NGY7 276 aa9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 DYNC2LI1Q8TCX1 351 aa9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 RPUSD4Q96CM3 377 aaKnown RBP9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 DIRAS2Q96HU8 199 aa9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 SCGB3A2Q96PL1 93 aa9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 CIB3Q96Q77 187 aaPredicted RBP9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 C20orf144Q9BQM9 153 aa9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 TMPRSS5Q9H3S3 457 aa9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 MCUBQ9NWR8 336 aa9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 CCDC59Q9P031 241 aaKnown RBP9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 RABL2BQ9UNT1 228 aa9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 HIGD1AQ9Y241 93 aa9.46□□□□□ -0.9
CLPTM1-208ENST00000588274 A0A096LPF7 62 aa9.45□□□□□ -0.9
CLPTM1-208ENST00000588274 LINC00854A0A1B0GVQ3 168 aa9.45□□□□□ -0.9
CLPTM1-208ENST00000588274 PRAC2D3DTV9 90 aa9.45□□□□□ -0.9
CLPTM1-208ENST00000588274 K7EPK0 472 aa9.45□□□□□ -0.9
CLPTM1-208ENST00000588274 SLC17A3O00476 420 aa9.45□□□□□ -0.9
CLPTM1-208ENST00000588274 OR5I1Q13606 314 aa9.45□□□□□ -0.9
CLPTM1-208ENST00000588274 SPANXN5Q5MJ07 72 aa9.45□□□□□ -0.9
CLPTM1-208ENST00000588274 TMED4Q7Z7H5 227 aa9.45□□□□□ -0.9
CLPTM1-208ENST00000588274 ZNF331Q9NQX6 463 aaPredicted RBP9.45□□□□□ -0.9
CLPTM1-208ENST00000588274 RABL2AQ9UBK7 228 aaPredicted RBP9.45□□□□□ -0.9
CLPTM1-208ENST00000588274 GAGE12BA1L429 117 aa9.44□□□□□ -0.9
CLPTM1-208ENST00000588274 HYPMO75409 117 aa9.44□□□□□ -0.9
CLPTM1-208ENST00000588274 MED6O75586 246 aa9.44□□□□□ -0.9
CLPTM1-208ENST00000588274 GAGE7O76087 117 aa9.44□□□□□ -0.9
CLPTM1-208ENST00000588274 GAGE12FP0CL80 117 aa9.44□□□□□ -0.9
CLPTM1-208ENST00000588274 GAGE12GP0CL81 117 aa9.44□□□□□ -0.9
CLPTM1-208ENST00000588274 GAGE12IP0CL82 117 aa9.44□□□□□ -0.9
CLPTM1-208ENST00000588274 CXCL2P19875 107 aa9.44□□□□□ -0.9
CLPTM1-208ENST00000588274 PPP1R1AQ13522 171 aa9.44□□□□□ -0.9
CLPTM1-208ENST00000588274 SLIRPQ9GZT3 109 aaKnown RBP9.44□□□□□ -0.9
CLPTM1-208ENST00000588274 FLG2Q5D862 2391 aaPredicted RBP9.44□□□□□ -0.9
CLPTM1-208ENST00000588274 DNAH8Q96JB1 4490 aa9.43□□□□□ -0.9
CLPTM1-208ENST00000588274 SFT2D2O95562 160 aa9.43□□□□□ -0.9
CLPTM1-208ENST00000588274 IL5P05113 134 aa9.43□□□□□ -0.9
CLPTM1-208ENST00000588274 INAFM2P0DMQ5 153 aa9.43□□□□□ -0.9
CLPTM1-208ENST00000588274 RAP2BP61225 183 aa9.43□□□□□ -0.9
CLPTM1-208ENST00000588274 RPP30P78346 268 aaKnown RBP9.43□□□□□ -0.9
CLPTM1-208ENST00000588274 ID3Q02535 119 aa9.43□□□□□ -0.9
CLPTM1-208ENST00000588274 Q5VSD8 79 aa9.43□□□□□ -0.9
CLPTM1-208ENST00000588274 MORN5Q5VZ52 161 aa9.43□□□□□ -0.9
CLPTM1-208ENST00000588274 Q6ZTI0 123 aa9.43□□□□□ -0.9
CLPTM1-208ENST00000588274 C11orf72Q8NBR9 251 aa9.43□□□□□ -0.9
CLPTM1-208ENST00000588274 C18orf15Q96N68 181 aa9.43□□□□□ -0.9
CLPTM1-208ENST00000588274 RSL24D1Q9UHA3 163 aaKnown RBP9.43□□□□□ -0.9
CLPTM1-208ENST00000588274 STRAPQ9Y3F4 350 aaKnown RBP9.43□□□□□ -0.9
CLPTM1-208ENST00000588274 HMCN2Q8NDA2 5059 aa9.43□□□□□ -0.9
CLPTM1-208ENST00000588274 PIGBOS1A0A0B4J2F0 54 aa9.42□□□□□ -0.9
CLPTM1-208ENST00000588274 SNRPCP09234 159 aaKnown RBP9.42□□□□□ -0.9
CLPTM1-208ENST00000588274 OR5G3P0C626 314 aa9.42□□□□□ -0.9
CLPTM1-208ENST00000588274 VAMP1P23763 118 aa9.42□□□□□ -0.9
CLPTM1-208ENST00000588274 S100A7P31151 101 aa9.42□□□□□ -0.9
CLPTM1-208ENST00000588274 KRTAP10-1P60331 282 aa9.42□□□□□ -0.9
CLPTM1-208ENST00000588274 POLR2GP62487 172 aaKnown RBP eCLIP9.42□□□□□ -0.9
CLPTM1-208ENST00000588274 DAZ2Q13117 558 aaKnown RBP9.42□□□□□ -0.9
CLPTM1-208ENST00000588274 ARV1Q9H2C2 271 aa9.42□□□□□ -0.9
CLPTM1-208ENST00000588274 ADAP1O75689 374 aa9.41□□□□□ -0.9
CLPTM1-208ENST00000588274 RLN2P04090 185 aa9.41□□□□□ -0.9
CLPTM1-208ENST00000588274 HOXB5P09067 269 aa9.41□□□□□ -0.9
CLPTM1-208ENST00000588274 DNAH10OSP0CZ25 163 aa9.41□□□□□ -0.9
CLPTM1-208ENST00000588274 IGLC2P0DOY2 106 aa9.41□□□□□ -0.9
CLPTM1-208ENST00000588274 TNFSF8P32971 234 aa9.41□□□□□ -0.9
CLPTM1-208ENST00000588274 SELENOTP62341 195 aa9.41□□□□□ -0.9
CLPTM1-208ENST00000588274 SLC38A11Q08AI6 406 aa9.41□□□□□ -0.9
CLPTM1-208ENST00000588274 LCN15Q6UWW0 184 aa9.41□□□□□ -0.9
CLPTM1-208ENST00000588274 TMEM14EPQ6UXP3 125 aa9.41□□□□□ -0.9
CLPTM1-208ENST00000588274 SAT2Q96F10 170 aaPredicted RBP9.41□□□□□ -0.9
CLPTM1-208ENST00000588274 TNFRSF18Q9Y5U5 241 aa9.41□□□□□ -0.9
CLPTM1-208ENST00000588274 SMCO3A2RU48 225 aa9.4□□□□□ -0.9
CLPTM1-208ENST00000588274 NPIPB6E9PJ23 425 aa9.4□□□□□ -0.9
CLPTM1-208ENST00000588274 FNDC10F2Z333 226 aa9.4□□□□□ -0.9
CLPTM1-208ENST00000588274 H3BTX0 84 aa9.4□□□□□ -0.9
CLPTM1-208ENST00000588274 CT45A10P0DMU9 189 aa9.4□□□□□ -0.9
CLPTM1-208ENST00000588274 C4orf46Q504U0 113 aa9.4□□□□□ -0.9
CLPTM1-208ENST00000588274 CDPF1Q6NVV7 123 aa9.4□□□□□ -0.9
CLPTM1-208ENST00000588274 TEPPQ6URK8 271 aa9.4□□□□□ -0.9
CLPTM1-208ENST00000588274 TMEM37Q8WXS4 190 aa9.4□□□□□ -0.9
CLPTM1-208ENST00000588274 ODF3Q96PU9 254 aa9.4□□□□□ -0.9
CLPTM1-208ENST00000588274 SLC50A1Q9BRV3 221 aa9.4□□□□□ -0.9
CLPTM1-208ENST00000588274 ARL6Q9H0F7 186 aa9.4□□□□□ -0.9
CLPTM1-208ENST00000588274 PPP1R14DQ9NXH3 145 aa9.4□□□□□ -0.9
CLPTM1-208ENST00000588274 PGPEP1Q9NXJ5 209 aa9.4□□□□□ -0.9
CLPTM1-208ENST00000588274 V9GYH0 126 aa9.4□□□□□ -0.9
CLPTM1-208ENST00000588274 H3BQ15 152 aa9.39□□□□□ -0.91
CLPTM1-208ENST00000588274 RRAS2P62070 204 aaPredicted RBP9.39□□□□□ -0.91
CLPTM1-208ENST00000588274 ARL16Q0P5N6 197 aa9.39□□□□□ -0.91
CLPTM1-208ENST00000588274 ZNF431Q8TF32 576 aaPredicted RBP9.39□□□□□ -0.91
CLPTM1-208ENST00000588274 SIVA1O15304 175 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms