RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 K7EMT4 169 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 PEX7O00628 323 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 PPP1R2P9O14990 202 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 ZNF207O43670 478 aaKnown RBP4.77□□□□□ -1.65
LIG3-206ENST00000586058 NDUFB4O95168 129 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 MT-ND4LP03901 98 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 ADCYAP1P18509 176 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 S100PP25815 95 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 CRYBB3P26998 211 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 PAFAH1B2P68402 229 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 RPL19P84098 196 aaKnown RBP4.77□□□□□ -1.65
LIG3-206ENST00000586058 AWAT1Q58HT5 328 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 C10orf91Q5T1B1 145 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 MORN5Q5VZ52 161 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 REC114Q7Z4M0 266 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 GPHB5Q86YW7 130 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 C15orf54Q8N8G6 183 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 CLRN3Q8NCR9 226 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 DYNLRB2Q8TF09 96 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 C11orf52Q96A22 123 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 RPS10P5Q9NQ39 176 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 CSMD2Q7Z408 3487 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 TACC2O95359 2948 aa4.77□□□□□ -1.65
LIG3-206ENST00000586058 IGHV4OR15-8A0A075B7B6 117 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 A0A087WW49 117 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 A8MWP6 167 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 GGTLC3B5MD39 225 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 C9JCJ5 164 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 LGALS9O00182 355 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 BUB3O43684 328 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 TRBV12-3P01733 135 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 CT45A10P0DMU9 189 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 IGLC2P0DOY2 106 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 HOXD3P31249 432 aaPredicted RBP4.76□□□□□ -1.65
LIG3-206ENST00000586058 ID1P41134 155 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 TAS2R60P59551 318 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 FOXL1Q12952 345 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 FAM90A2PQ658T7 463 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 KCNIP4Q6PIL6 250 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 OR11H1Q8NG94 326 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 LINC01006Q8NI28 216 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 MYOZ3Q8TDC0 251 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 ANAPC16Q96DE5 110 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 SMIM12Q96EX1 92 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 ZNF503Q96F45 646 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 BTF3L4Q96K17 158 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 C16orf92Q96LL3 132 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 LY96Q9Y6Y9 160 aa4.76□□□□□ -1.65
LIG3-206ENST00000586058 CENPEQ02224 2701 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 UNC79Q9P2D8 2635 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 IGHV3OR16-13A0A075B7E8 117 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 IGHV3-49A0A0A0MS15 119 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 IGHV3-74A0A0B4J1X5 117 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 IGHV3-66A0A0C4DH42 116 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 A0A1W2PRX2 142 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 H3BTX0 84 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 DNASE2O00115 360 aaPredicted RBP4.75□□□□□ -1.65
LIG3-206ENST00000586058 PF4P02776 101 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 TCRAP04437 139 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 MGST1P10620 155 aaKnown RBP4.75□□□□□ -1.65
LIG3-206ENST00000586058 RPL35P42766 123 aaKnown RBP4.75□□□□□ -1.65
LIG3-206ENST00000586058 SYNJ2BPP57105 145 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 SNRPD3P62318 126 aaKnown RBP4.75□□□□□ -1.65
LIG3-206ENST00000586058 FLI1Q01543 452 aaPredicted RBP4.75□□□□□ -1.65
LIG3-206ENST00000586058 GUCA2BQ16661 112 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 CENPWQ5EE01 88 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 C10orf99Q6UWK7 81 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 RBPMS2Q6ZRY4 209 aaKnown RBP4.75□□□□□ -1.65
LIG3-206ENST00000586058 LURAP1LQ8IV03 231 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.75□□□□□ -1.65
LIG3-206ENST00000586058 TMEM75Q8N9X5 138 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 OR1N2Q8NGR9 330 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 MRPL53Q96EL3 112 aaKnown RBP4.75□□□□□ -1.65
LIG3-206ENST00000586058 DAZAP1Q96EP5 407 aaKnown RBP4.75□□□□□ -1.65
LIG3-206ENST00000586058 ZNF414Q96IQ9 312 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 RHPN1-AS1Q9BWJ2 59 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 CTDSP1Q9GZU7 261 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 SDF2L1Q9HCN8 221 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 NRN1Q9NPD7 142 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 SMCO4Q9NRQ5 59 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 ZNF586Q9NXT0 402 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 EPDR1Q9UM22 224 aa4.75□□□□□ -1.65
LIG3-206ENST00000586058 A0A087WWC5 75 aa4.74□□□□□ -1.65
LIG3-206ENST00000586058 C9JQL5 133 aa4.74□□□□□ -1.65
LIG3-206ENST00000586058 H7BYZ3 331 aa4.74□□□□□ -1.65
LIG3-206ENST00000586058 ISLRO14498 428 aa4.74□□□□□ -1.65
LIG3-206ENST00000586058 TSPAN4O14817 238 aa4.74□□□□□ -1.65
LIG3-206ENST00000586058 SNRPCP09234 159 aaKnown RBP4.74□□□□□ -1.65
LIG3-206ENST00000586058 GNG5P63218 68 aa4.74□□□□□ -1.65
LIG3-206ENST00000586058 TMEM183BQ1AE95 376 aa4.74□□□□□ -1.65
LIG3-206ENST00000586058 DEFB136Q30KP8 78 aa4.74□□□□□ -1.65
LIG3-206ENST00000586058 TMEM78Q5T7P6 136 aa4.74□□□□□ -1.65
LIG3-206ENST00000586058 UNQ9165/PRO28630Q6UXU0 137 aa4.74□□□□□ -1.65
LIG3-206ENST00000586058 GOLT1AQ6ZVE7 132 aa4.74□□□□□ -1.65
LIG3-206ENST00000586058 TCF24Q7RTU0 167 aa4.74□□□□□ -1.65
LIG3-206ENST00000586058 Q86TA4 180 aa4.74□□□□□ -1.65
LIG3-206ENST00000586058 EXOC3-AS1Q8N2X6 119 aa4.74□□□□□ -1.65
LIG3-206ENST00000586058 ZNF738Q8NE65 137 aa4.74□□□□□ -1.65
LIG3-206ENST00000586058 OR9G4Q8NGQ1 327 aa4.74□□□□□ -1.65
LIG3-206ENST00000586058 OR10J6PQ8NGY7 276 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms