RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 MRPS12O15235 138 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-237ENST00000585163 HLA-DRB1P01911 266 aa11.19□□□□□ -0.62
CDK5RAP3-237ENST00000585163 HTR1DP28221 377 aa11.19□□□□□ -0.62
CDK5RAP3-237ENST00000585163 S100A7P31151 101 aa11.19□□□□□ -0.62
CDK5RAP3-237ENST00000585163 ZNF138P52744 262 aa11.19□□□□□ -0.62
CDK5RAP3-237ENST00000585163 PSG3Q16557 428 aa11.19□□□□□ -0.62
CDK5RAP3-237ENST00000585163 PSG8Q9UQ74 426 aa11.19□□□□□ -0.62
CDK5RAP3-237ENST00000585163 TACC2O95359 2948 aa11.19□□□□□ -0.62
CDK5RAP3-237ENST00000585163 ARMS2P0C7Q2 107 aa11.19□□□□□ -0.62
CDK5RAP3-237ENST00000585163 LY6G5BQ8NDX9 201 aa11.19□□□□□ -0.62
CDK5RAP3-237ENST00000585163 VKORC1Q9BQB6 163 aa11.19□□□□□ -0.62
CDK5RAP3-237ENST00000585163 ONECUT1Q9UBC0 465 aa11.19□□□□□ -0.62
CDK5RAP3-237ENST00000585163 NBR2O15453 112 aa11.18□□□□□ -0.62
CDK5RAP3-237ENST00000585163 IL4P05112 153 aa11.18□□□□□ -0.62
CDK5RAP3-237ENST00000585163 RIGQ13278 110 aa11.18□□□□□ -0.62
CDK5RAP3-237ENST00000585163 UNQ5815/PRO19632Q6UWF5 114 aa11.18□□□□□ -0.62
CDK5RAP3-237ENST00000585163 NEU4Q8WWR8 484 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-237ENST00000585163 ZNF414Q96IQ9 312 aa11.18□□□□□ -0.62
CDK5RAP3-237ENST00000585163 MAP1LC3CQ9BXW4 147 aa11.18□□□□□ -0.62
CDK5RAP3-237ENST00000585163 TMEM191AQ9H0A3 160 aa11.18□□□□□ -0.62
CDK5RAP3-237ENST00000585163 WI2-2373I1.2A0A1W2PRP0 233 aa11.18□□□□□ -0.62
CDK5RAP3-237ENST00000585163 CRIP1P50238 77 aa11.18□□□□□ -0.62
CDK5RAP3-237ENST00000585163 PET117Q6UWS5 81 aa11.18□□□□□ -0.62
CDK5RAP3-237ENST00000585163 TMUB1Q9BVT8 246 aa11.18□□□□□ -0.62
CDK5RAP3-237ENST00000585163 COX11Q9Y6N1 276 aa11.18□□□□□ -0.62
CDK5RAP3-237ENST00000585163 A0A1B0GW15 77 aa11.17□□□□□ -0.62
CDK5RAP3-237ENST00000585163 hDV102S1A0JD36 115 aa11.17□□□□□ -0.62
CDK5RAP3-237ENST00000585163 ZNF672Q499Z4 452 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-237ENST00000585163 NPBQ8NG41 125 aa11.17□□□□□ -0.62
CDK5RAP3-237ENST00000585163 LINC01560Q8TB33 94 aa11.17□□□□□ -0.62
CDK5RAP3-237ENST00000585163 CFHR4Q92496 578 aa11.17□□□□□ -0.62
CDK5RAP3-237ENST00000585163 ASCL2Q99929 193 aa11.17□□□□□ -0.62
CDK5RAP3-237ENST00000585163 HSPB8Q9UJY1 196 aa11.17□□□□□ -0.62
CDK5RAP3-237ENST00000585163 NDUFA3O95167 84 aa11.17□□□□□ -0.62
CDK5RAP3-237ENST00000585163 NHLH1Q02575 133 aa11.17□□□□□ -0.62
CDK5RAP3-237ENST00000585163 Q6AWC8 147 aa11.17□□□□□ -0.62
CDK5RAP3-237ENST00000585163 ZNF738Q8NE65 137 aa11.17□□□□□ -0.62
CDK5RAP3-237ENST00000585163 OR11H6Q8NGC7 330 aa11.17□□□□□ -0.62
CDK5RAP3-237ENST00000585163 DPM3Q9P2X0 92 aa11.17□□□□□ -0.62
CDK5RAP3-237ENST00000585163 ZFHX2Q9C0A1 2572 aaPredicted RBP11.17□□□□□ -0.62
CDK5RAP3-237ENST00000585163 FCGR2BP31994 310 aaPredicted RBP11.16□□□□□ -0.62
CDK5RAP3-237ENST00000585163 RNF151Q2KHN1 245 aa11.16□□□□□ -0.62
CDK5RAP3-237ENST00000585163 Q6ZVH6 145 aa11.16□□□□□ -0.62
CDK5RAP3-237ENST00000585163 RAB1BQ9H0U4 201 aa11.16□□□□□ -0.62
CDK5RAP3-237ENST00000585163 TPRP12270 2363 aaKnown RBP11.16□□□□□ -0.62
CDK5RAP3-237ENST00000585163 M0R3E3 92 aa11.16□□□□□ -0.62
CDK5RAP3-237ENST00000585163 CCL25O15444 150 aa11.16□□□□□ -0.62
CDK5RAP3-237ENST00000585163 CSN3P07498 182 aa11.16□□□□□ -0.62
CDK5RAP3-237ENST00000585163 PDE6HQ13956 83 aa11.16□□□□□ -0.62
CDK5RAP3-237ENST00000585163 KLF17Q5JT82 389 aaPredicted RBP11.16□□□□□ -0.62
CDK5RAP3-237ENST00000585163 AP5S1Q9NUS5 200 aa11.16□□□□□ -0.62
CDK5RAP3-237ENST00000585163 TP73-AS1Q9UF72 201 aa11.16□□□□□ -0.62
CDK5RAP3-237ENST00000585163 HILPDAQ9Y5L2 63 aa11.16□□□□□ -0.62
CDK5RAP3-237ENST00000585163 TRAV30A0A087WSZ9 112 aa11.15□□□□□ -0.62
CDK5RAP3-237ENST00000585163 S100A7AQ86SG5 101 aa11.15□□□□□ -0.62
CDK5RAP3-237ENST00000585163 GNG7O60262 68 aa11.15□□□□□ -0.62
CDK5RAP3-237ENST00000585163 PRB4P10163 310 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-237ENST00000585163 PTTG1IPP53801 180 aa11.15□□□□□ -0.62
CDK5RAP3-237ENST00000585163 BCL6BQ8N143 479 aaPredicted RBP11.15□□□□□ -0.62
CDK5RAP3-237ENST00000585163 CEACAM3P40198 252 aa11.14□□□□□ -0.63
CDK5RAP3-237ENST00000585163 ARF6P62330 175 aa11.14□□□□□ -0.63
CDK5RAP3-237ENST00000585163 LINC01545Q5VT33 79 aa11.14□□□□□ -0.63
CDK5RAP3-237ENST00000585163 SLC25A34Q6PIV7 304 aa11.14□□□□□ -0.63
CDK5RAP3-237ENST00000585163 ZNF493Q6ZR52 646 aa11.14□□□□□ -0.63
CDK5RAP3-237ENST00000585163 ZNF48Q96MX3 618 aaPredicted RBP11.14□□□□□ -0.63
CDK5RAP3-237ENST00000585163 FANCD2OSQ96PS1 177 aa11.14□□□□□ -0.63
CDK5RAP3-237ENST00000585163 S4R3C0 116 aa11.14□□□□□ -0.63
CDK5RAP3-237ENST00000585163 IGLV11-55A0A075B6I3 123 aa11.14□□□□□ -0.63
CDK5RAP3-237ENST00000585163 CT45A10P0DMU9 189 aa11.14□□□□□ -0.63
CDK5RAP3-237ENST00000585163 UBE2V1Q13404 147 aa11.14□□□□□ -0.63
CDK5RAP3-237ENST00000585163 MPV17L2Q567V2 206 aa11.14□□□□□ -0.63
CDK5RAP3-237ENST00000585163 C8orf49Q96NF6 230 aa11.14□□□□□ -0.63
CDK5RAP3-237ENST00000585163 AAMDCQ9H7C9 122 aa11.14□□□□□ -0.63
CDK5RAP3-237ENST00000585163 SCRT2Q9NQ03 307 aa11.14□□□□□ -0.63
CDK5RAP3-237ENST00000585163 NPIPB5A8MRT5 1133 aa11.13□□□□□ -0.63
CDK5RAP3-237ENST00000585163 C5orf64Q2M2E5 130 aa11.13□□□□□ -0.63
CDK5RAP3-237ENST00000585163 VPS25Q9BRG1 176 aa11.13□□□□□ -0.63
CDK5RAP3-237ENST00000585163 MCRIP2Q9BUT9 160 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP3-237ENST00000585163 MS4A6AQ9H2W1 248 aa11.13□□□□□ -0.63
CDK5RAP3-237ENST00000585163 F8W735 103 aaPredicted RBP11.13□□□□□ -0.63
CDK5RAP3-237ENST00000585163 MFAP4P55083 255 aa11.13□□□□□ -0.63
CDK5RAP3-237ENST00000585163 FBLN7Q53RD9 439 aa11.13□□□□□ -0.63
CDK5RAP3-237ENST00000585163 ZNF747Q9BV97 191 aa11.13□□□□□ -0.63
CDK5RAP3-237ENST00000585163 TPPP3Q9BW30 176 aa11.13□□□□□ -0.63
CDK5RAP3-237ENST00000585163 DCHS2Q6V1P9 2916 aa11.13□□□□□ -0.63
CDK5RAP3-237ENST00000585163 ODF3BA8MYP8 253 aa11.12□□□□□ -0.63
CDK5RAP3-237ENST00000585163 GRNP28799 593 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP3-237ENST00000585163 FBXL19-AS1Q494R0 122 aa11.12□□□□□ -0.63
CDK5RAP3-237ENST00000585163 IGFBPL1Q8WX77 278 aa11.12□□□□□ -0.63
CDK5RAP3-237ENST00000585163 LRBAP50851 2863 aa11.12□□□□□ -0.63
CDK5RAP3-237ENST00000585163 H0Y8G0 127 aa11.12□□□□□ -0.63
CDK5RAP3-237ENST00000585163 LY6HO94772 140 aa11.12□□□□□ -0.63
CDK5RAP3-237ENST00000585163 CSN1S1P47710 185 aa11.12□□□□□ -0.63
CDK5RAP3-237ENST00000585163 HES1Q14469 280 aa11.12□□□□□ -0.63
CDK5RAP3-237ENST00000585163 ZNF562Q6V9R5 426 aa11.12□□□□□ -0.63
CDK5RAP3-237ENST00000585163 FA2HQ7L5A8 372 aa11.12□□□□□ -0.63
CDK5RAP3-237ENST00000585163 OR10AG1Q8NH19 301 aa11.12□□□□□ -0.63
CDK5RAP3-237ENST00000585163 PRSS3P2Q8NHM4 247 aa11.12□□□□□ -0.63
CDK5RAP3-237ENST00000585163 FAM90A27PA6NNH2 459 aa11.11□□□□□ -0.63
CDK5RAP3-237ENST00000585163 M0R1W7 72 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms