RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 ZNF581Q9P0T4 197 aa10.6□□□□□ -0.71
RNF43-208ENST00000584437 E9PLN8 166 aa10.6□□□□□ -0.71
RNF43-208ENST00000584437 LGALS9BQ3B8N2 356 aa10.6□□□□□ -0.71
RNF43-208ENST00000584437 LGALS9CQ6DKI2 356 aa10.6□□□□□ -0.71
RNF43-208ENST00000584437 SDK2Q58EX2 2172 aa10.6□□□□□ -0.71
RNF43-208ENST00000584437 IGHV1-24A0A0C4DH33 117 aa10.6□□□□□ -0.71
RNF43-208ENST00000584437 M0R1W7 72 aa10.6□□□□□ -0.71
RNF43-208ENST00000584437 KLHDC3Q9BQ90 382 aa10.6□□□□□ -0.71
RNF43-208ENST00000584437 TSSC4Q9Y5U2 329 aaPredicted RBP10.6□□□□□ -0.71
RNF43-208ENST00000584437 TP53BP1Q12888 1972 aaPredicted RBP10.6□□□□□ -0.71
RNF43-208ENST00000584437 ERCC8Q13216 396 aa10.6□□□□□ -0.71
RNF43-208ENST00000584437 VMO1Q7Z5L0 202 aa10.6□□□□□ -0.71
RNF43-208ENST00000584437 Q8N8P6 123 aa10.6□□□□□ -0.71
RNF43-208ENST00000584437 TMEM141Q96I45 108 aa10.6□□□□□ -0.71
RNF43-208ENST00000584437 BUB1B-PAK6H3BSN5 160 aa10.59□□□□□ -0.71
RNF43-208ENST00000584437 SRD5A1P18405 259 aa10.59□□□□□ -0.71
RNF43-208ENST00000584437 PRIMA1Q86XR5 153 aa10.59□□□□□ -0.71
RNF43-208ENST00000584437 USMG5Q96IX5 58 aa10.59□□□□□ -0.71
RNF43-208ENST00000584437 IGKV1D-17A0A075B6S4 117 aa10.59□□□□□ -0.71
RNF43-208ENST00000584437 C20orf204Q6ZNR8 217 aa10.59□□□□□ -0.71
RNF43-208ENST00000584437 A0A087WX48 190 aa10.59□□□□□ -0.71
RNF43-208ENST00000584437 PAX9P55771 341 aa10.59□□□□□ -0.71
RNF43-208ENST00000584437 WFDC12Q8WWY7 111 aa10.59□□□□□ -0.71
RNF43-208ENST00000584437 LCTP09848 1927 aa10.59□□□□□ -0.71
RNF43-208ENST00000584437 LRRK1Q38SD2 2015 aa10.59□□□□□ -0.71
RNF43-208ENST00000584437 TAL2Q16559 108 aa10.58□□□□□ -0.72
RNF43-208ENST00000584437 V9GYV3 84 aa10.58□□□□□ -0.72
RNF43-208ENST00000584437 PRB4P10163 310 aaPredicted RBP10.58□□□□□ -0.72
RNF43-208ENST00000584437 TRPT1Q86TN4 253 aaKnown RBP10.58□□□□□ -0.72
RNF43-208ENST00000584437 CRIPAKQ8N1N5 446 aa10.58□□□□□ -0.72
RNF43-208ENST00000584437 A0A1W2PRX2 142 aa10.58□□□□□ -0.72
RNF43-208ENST00000584437 FAM223BA6NKX1 122 aa10.58□□□□□ -0.72
RNF43-208ENST00000584437 IGLL1P15814 213 aa10.58□□□□□ -0.72
RNF43-208ENST00000584437 C6orf226Q5I0X4 101 aa10.58□□□□□ -0.72
RNF43-208ENST00000584437 FAM223AQ8IWN6 122 aa10.58□□□□□ -0.72
RNF43-208ENST00000584437 TMEM14BQ9NUH8 114 aa10.58□□□□□ -0.72
RNF43-208ENST00000584437 IGKV1-6A0A0C4DH72 117 aa10.58□□□□□ -0.72
RNF43-208ENST00000584437 SMIM27A0A1W2PRY6 76 aa10.58□□□□□ -0.72
RNF43-208ENST00000584437 E9PQ18 207 aa10.58□□□□□ -0.72
RNF43-208ENST00000584437 LTBRP36941 435 aa10.58□□□□□ -0.72
RNF43-208ENST00000584437 SPXQ9BT56 116 aa10.58□□□□□ -0.72
RNF43-208ENST00000584437 OR11H6Q8NGC7 330 aa10.57□□□□□ -0.72
RNF43-208ENST00000584437 ETDBQ3ZM63 59 aa10.57□□□□□ -0.72
RNF43-208ENST00000584437 AKAP6Q13023 2319 aa10.57□□□□□ -0.72
RNF43-208ENST00000584437 ZNF726P1Q15940 193 aa10.57□□□□□ -0.72
RNF43-208ENST00000584437 CFHR2P36980 270 aa10.57□□□□□ -0.72
RNF43-208ENST00000584437 MLANAQ16655 118 aa10.57□□□□□ -0.72
RNF43-208ENST00000584437 C1orf159Q96HA4 380 aa10.57□□□□□ -0.72
RNF43-208ENST00000584437 TMEM213A2RRL7 107 aa10.56□□□□□ -0.72
RNF43-208ENST00000584437 C2orf66Q6UXQ4 117 aa10.56□□□□□ -0.72
RNF43-208ENST00000584437 DOCK3Q8IZD9 2030 aa10.56□□□□□ -0.72
RNF43-208ENST00000584437 A0A1W2PPM0 123 aa10.56□□□□□ -0.72
RNF43-208ENST00000584437 SIVA1O15304 175 aa10.56□□□□□ -0.72
RNF43-208ENST00000584437 NDUFB8O95169 186 aa10.56□□□□□ -0.72
RNF43-208ENST00000584437 BVES-AS1Q5T3Y7 98 aa10.56□□□□□ -0.72
RNF43-208ENST00000584437 LINC00527Q9UJ94 153 aa10.56□□□□□ -0.72
RNF43-208ENST00000584437 SIPA1L1O43166 1804 aa10.56□□□□□ -0.72
RNF43-208ENST00000584437 IGHV3-73A0A0B4J1V6 119 aa10.56□□□□□ -0.72
RNF43-208ENST00000584437 UTF1Q5T230 341 aa10.56□□□□□ -0.72
RNF43-208ENST00000584437 CYYR1Q96J86 154 aa10.56□□□□□ -0.72
RNF43-208ENST00000584437 SOCS3O14543 225 aa10.56□□□□□ -0.72
RNF43-208ENST00000584437 FCN3O75636 299 aa10.56□□□□□ -0.72
RNF43-208ENST00000584437 B3GALT5-AS1P59052 145 aa10.56□□□□□ -0.72
RNF43-208ENST00000584437 LINC00205P59089 165 aa10.56□□□□□ -0.72
RNF43-208ENST00000584437 C11orf52Q96A22 123 aa10.56□□□□□ -0.72
RNF43-208ENST00000584437 TRGV1A0A0A0MS02 117 aa10.55□□□□□ -0.72
RNF43-208ENST00000584437 PMVKQ15126 192 aa10.55□□□□□ -0.72
RNF43-208ENST00000584437 VGLL1Q99990 258 aa10.55□□□□□ -0.72
RNF43-208ENST00000584437 A0A1W2PPI3 338 aa10.55□□□□□ -0.72
RNF43-208ENST00000584437 IGKV1-16P04430 117 aa10.55□□□□□ -0.72
RNF43-208ENST00000584437 LMO1P25800 156 aa10.55□□□□□ -0.72
RNF43-208ENST00000584437 C1orf147Q96MC9 270 aaPredicted RBP10.55□□□□□ -0.72
RNF43-208ENST00000584437 ATP6V0BQ99437 205 aa10.55□□□□□ -0.72
RNF43-208ENST00000584437 NDPQ00604 133 aa10.55□□□□□ -0.72
RNF43-208ENST00000584437 SLC25A16P16260 332 aa10.55□□□□□ -0.72
RNF43-208ENST00000584437 TP53TG1Q9Y2A0 90 aa10.55□□□□□ -0.72
RNF43-208ENST00000584437 EFNA4P52798 201 aa10.54□□□□□ -0.72
RNF43-208ENST00000584437 TRBV19A0A075B6N1 114 aa10.54□□□□□ -0.72
RNF43-208ENST00000584437 GAGE12HA6NDE8 117 aa10.54□□□□□ -0.72
RNF43-208ENST00000584437 INSP01308 110 aa10.54□□□□□ -0.72
RNF43-208ENST00000584437 IFITM1P13164 125 aa10.54□□□□□ -0.72
RNF43-208ENST00000584437 DSCR9P59020 149 aa10.54□□□□□ -0.72
RNF43-208ENST00000584437 IGFL4Q6B9Z1 124 aa10.54□□□□□ -0.72
RNF43-208ENST00000584437 NDUFA4L2Q9NRX3 87 aa10.54□□□□□ -0.72
RNF43-208ENST00000584437 A0A087WWL8 130 aa10.54□□□□□ -0.72
RNF43-208ENST00000584437 KLRD1Q13241 179 aa10.54□□□□□ -0.72
RNF43-208ENST00000584437 MRPL51Q4U2R6 128 aaKnown RBP10.53□□□□□ -0.72
RNF43-208ENST00000584437 DOCK6Q96HP0 2047 aa10.53□□□□□ -0.72
RNF43-208ENST00000584437 TRAV13-1A0A0B4J241 112 aa10.53□□□□□ -0.72
RNF43-208ENST00000584437 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.53□□□□□ -0.72
RNF43-208ENST00000584437 RHODO00212 210 aa10.53□□□□□ -0.72
RNF43-208ENST00000584437 TCF15Q12870 199 aa10.53□□□□□ -0.72
RNF43-208ENST00000584437 LCNL1Q6ZST4 164 aa10.53□□□□□ -0.72
RNF43-208ENST00000584437 BOD1L2Q8IYS8 172 aa10.53□□□□□ -0.72
RNF43-208ENST00000584437 RHPN1-AS1Q9BWJ2 59 aa10.53□□□□□ -0.72
RNF43-208ENST00000584437 SPANXCQ9NY87 97 aa10.53□□□□□ -0.72
RNF43-208ENST00000584437 ZNF625Q96I27 306 aaPredicted RBP10.53□□□□□ -0.72
RNF43-208ENST00000584437 F8WEM9 126 aa10.52□□□□□ -0.72
RNF43-208ENST00000584437 C1QTNF4Q9BXJ3 329 aa10.52□□□□□ -0.72
RNF43-208ENST00000584437 TMEM14CQ9P0S9 112 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms