RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 CD109Q6YHK3 1445 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 TNRC6AQ8NDV7 1962 aaKnown RBP0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 NOTCH1P46531 2555 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 TRAV27A0A087WT01 109 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 IGLV3-32A0A0A0MS00 114 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 TRBV6-4A0A1B0GX49 114 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 MAP1LC3B2A6NCE7 125 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 H3BRM9 83 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 RER1O15258 196 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 DNAL4O96015 105 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 CD2P06729 351 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 FABP1P07148 127 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 CXCL1P09341 107 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 CXCL8P10145 99 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 GLRXP35754 106 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 RPL35P42766 123 aaKnown RBP0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 INSL3P51460 131 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 CRYBA4P53673 196 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 FKBP1CQ5VVH2 108 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 DCUN1D2Q6PH85 259 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 LRRC18Q8N456 261 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 POP5Q969H6 163 aaKnown RBP0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 RAB37Q96AX2 223 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 OBSCN-AS1Q96MR7 158 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 CCDC32Q9BV29 185 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 OR2H1Q9GZK4 316 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 TAS2R7Q9NYW3 318 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 LAMTOR2Q9Y2Q5 125 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 CHCHD2Q9Y6H1 151 aaPredicted RBP0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 MYH3P11055 1940 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 MYLKQ15746 1914 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 MCM3APO60318 1980 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 PIK3C2AO00443 1686 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 FBN2P35556 2912 aa0.81□□□□□ -2.28
PPP4R1-227ENST00000583988 HEATR1Q9H583 2144 aaKnown RBP0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 IGHV1-58A0A0C4DH39 117 aa0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 E7EQ34 232 aa0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 F8W1H4 67 aa0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 FAM107AO95990 144 aa0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 CSN2P05814 226 aa0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 HBBP68871 147 aa0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 CIRBPQ14011 172 aaKnown RBP0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 PATE2Q6UY27 113 aa0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 ZNF833PQ6ZTB9 187 aa0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 ARPINQ7Z6K5 226 aa0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 GKN2Q86XP6 184 aa0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 OR5AS1Q8N127 324 aa0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 BORCS8Q96FH0 119 aa0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 HYLS1Q96M11 299 aa0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 LINC00052Q96N35 136 aa0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 MCEEQ96PE7 176 aa0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 TCEAL2Q9H3H9 227 aaPredicted RBP0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 NUBP2Q9Y5Y2 271 aa0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 ADGBQ8N7X0 1667 aa0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 LAMA4Q16363 1823 aa0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 MYO5AQ9Y4I1 1855 aaKnown RBP0.8□□□□□ -2.28
PPP4R1-227ENST00000583988 ZCCHC11Q5TAX3 1644 aaKnown RBP0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 A0A087WSZ3 146 aa0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 hDV103S1A0JD37 113 aa0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 ODAMA1E959 279 aa0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 KPNA4O00629 521 aaPredicted RBP0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 NUPR1O60356 82 aa0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 COX7CP15954 63 aa0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 ZNF25P17030 456 aaPredicted RBP0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 NDUFA6P56556 154 aa0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 TFAMQ00059 246 aaKnown RBP0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 MSMO1Q15800 293 aa0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 LTC4SQ16873 150 aa0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 C1orf134Q5TEV5 83 aa0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 LINC00322Q6ZN03 302 aaPredicted RBP0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 SMIM15Q7Z3B0 74 aa0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 ANGPTL5Q86XS5 388 aa0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 FAM216BQ8N7L0 139 aa0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 PLPP5Q8NEB5 264 aa0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 OR4B1Q8NGF8 309 aa0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 OR10AG1Q8NH19 301 aa0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 TMEM138Q9NPI0 162 aa0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 TNFSF18Q9UNG2 199 aa0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 KIAA1549Q9HCM3 1950 aa0.79□□□□□ -2.28
PPP4R1-227ENST00000583988 TRPM1Q7Z4N2 1603 aa0.78□□□□□ -2.28
PPP4R1-227ENST00000583988 AHNAK2Q8IVF2 5795 aa0.78□□□□□ -2.28
PPP4R1-227ENST00000583988 A0A096LPI6 279 aa0.78□□□□□ -2.28
PPP4R1-227ENST00000583988 K7ERJ3 54 aa0.78□□□□□ -2.28
PPP4R1-227ENST00000583988 CCL25O15444 150 aa0.78□□□□□ -2.28
PPP4R1-227ENST00000583988 IFNA21P01568 189 aa0.78□□□□□ -2.28
PPP4R1-227ENST00000583988 MT-ND6P03923 174 aa0.78□□□□□ -2.28
PPP4R1-227ENST00000583988 BCL2P10415 239 aa0.78□□□□□ -2.28
PPP4R1-227ENST00000583988 PSG9Q00887 426 aa0.78□□□□□ -2.28
PPP4R1-227ENST00000583988 TMEM78Q5T7P6 136 aa0.78□□□□□ -2.28
PPP4R1-227ENST00000583988 HAGHLQ6PII5 290 aaPredicted RBP0.78□□□□□ -2.28
PPP4R1-227ENST00000583988 PHF5AQ7RTV0 110 aaKnown RBP0.78□□□□□ -2.28
PPP4R1-227ENST00000583988 PRR15Q8IV56 129 aa0.78□□□□□ -2.28
PPP4R1-227ENST00000583988 GGACTQ9BVM4 153 aa0.78□□□□□ -2.28
PPP4R1-227ENST00000583988 HSPB8Q9UJY1 196 aa0.78□□□□□ -2.28
PPP4R1-227ENST00000583988 NISCHQ9Y2I1 1504 aa0.78□□□□□ -2.28
PPP4R1-227ENST00000583988 ZNF469Q96JG9 3925 aaPredicted RBP0.78□□□□□ -2.29
PPP4R1-227ENST00000583988 CHD3Q12873 2000 aaKnown RBP0.77□□□□□ -2.29
PPP4R1-227ENST00000583988 NCOA6Q14686 2063 aaPredicted RBP0.77□□□□□ -2.29
PPP4R1-227ENST00000583988 SNRNP200O75643 2136 aaKnown RBP0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms