RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 SERTAD4Q9NUC0 356 aa11.39□□□□□ -0.59
CDK5RAP3-218ENST00000580391 M0R3E3 92 aa11.38□□□□□ -0.59
CDK5RAP3-218ENST00000580391 S100A7P31151 101 aa11.38□□□□□ -0.59
CDK5RAP3-218ENST00000580391 SLC35B1P78383 322 aa11.38□□□□□ -0.59
CDK5RAP3-218ENST00000580391 NF1P21359 2839 aa11.38□□□□□ -0.59
CDK5RAP3-218ENST00000580391 FAM181BA6NEQ2 426 aa11.37□□□□□ -0.59
CDK5RAP3-218ENST00000580391 CRYBA1P05813 215 aa11.37□□□□□ -0.59
CDK5RAP3-218ENST00000580391 CD99P14209 185 aa11.37□□□□□ -0.59
CDK5RAP3-218ENST00000580391 GALR1P47211 349 aa11.37□□□□□ -0.59
CDK5RAP3-218ENST00000580391 UBE2G1P62253 170 aa11.37□□□□□ -0.59
CDK5RAP3-218ENST00000580391 FOXE3Q13461 319 aa11.37□□□□□ -0.59
CDK5RAP3-218ENST00000580391 TMEM183BQ1AE95 376 aa11.37□□□□□ -0.59
CDK5RAP3-218ENST00000580391 LYPD1Q8N2G4 141 aa11.37□□□□□ -0.59
CDK5RAP3-218ENST00000580391 CMTM2Q8TAZ6 248 aa11.37□□□□□ -0.59
CDK5RAP3-218ENST00000580391 U3KQE9 123 aa11.37□□□□□ -0.59
CDK5RAP3-218ENST00000580391 TRAV8-1A0A0A6YYK1 113 aa11.37□□□□□ -0.59
CDK5RAP3-218ENST00000580391 MGST1P10620 155 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-218ENST00000580391 RAB5AP20339 215 aa11.37□□□□□ -0.59
CDK5RAP3-218ENST00000580391 FAM209BQ5JX69 171 aa11.37□□□□□ -0.59
CDK5RAP3-218ENST00000580391 GOLT1AQ6ZVE7 132 aa11.37□□□□□ -0.59
CDK5RAP3-218ENST00000580391 MYOZ3Q8TDC0 251 aa11.37□□□□□ -0.59
CDK5RAP3-218ENST00000580391 TMEM190Q8WZ59 177 aa11.37□□□□□ -0.59
CDK5RAP3-218ENST00000580391 PEF1Q9UBV8 284 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP3-218ENST00000580391 GGCTO75223 188 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-218ENST00000580391 ELANEP08246 267 aa11.36□□□□□ -0.59
CDK5RAP3-218ENST00000580391 Q6ZSV7 163 aa11.36□□□□□ -0.59
CDK5RAP3-218ENST00000580391 BAGE2Q86Y30 109 aa11.36□□□□□ -0.59
CDK5RAP3-218ENST00000580391 KLF12Q9Y4X4 402 aa11.36□□□□□ -0.59
CDK5RAP3-218ENST00000580391 HIVEP2P31629 2446 aa11.36□□□□□ -0.59
CDK5RAP3-218ENST00000580391 PFN1P07737 140 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP3-218ENST00000580391 Q71RC1 249 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP3-218ENST00000580391 OR10G8Q8NGN5 311 aa11.36□□□□□ -0.59
CDK5RAP3-218ENST00000580391 AAMDCQ9H7C9 122 aa11.36□□□□□ -0.59
CDK5RAP3-218ENST00000580391 A0A087X0K7 114 aa11.35□□□□□ -0.59
CDK5RAP3-218ENST00000580391 PPP1R2P9O14990 202 aa11.35□□□□□ -0.59
CDK5RAP3-218ENST00000580391 GCGP01275 180 aa11.35□□□□□ -0.59
CDK5RAP3-218ENST00000580391 HLA-DMBP28068 263 aa11.35□□□□□ -0.59
CDK5RAP3-218ENST00000580391 C1orf194Q5T5A4 169 aa11.35□□□□□ -0.59
CDK5RAP3-218ENST00000580391 IGFL4Q6B9Z1 124 aa11.35□□□□□ -0.59
CDK5RAP3-218ENST00000580391 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.35□□□□□ -0.59
CDK5RAP3-218ENST00000580391 Q86TA4 180 aa11.35□□□□□ -0.59
CDK5RAP3-218ENST00000580391 FMC1Q96HJ9 113 aa11.35□□□□□ -0.59
CDK5RAP3-218ENST00000580391 GPR82Q96P67 336 aa11.35□□□□□ -0.59
CDK5RAP3-218ENST00000580391 RNASE7Q9H1E1 156 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-218ENST00000580391 ZNF320A2RRD8 509 aa11.34□□□□□ -0.59
CDK5RAP3-218ENST00000580391 ZNF785A8K8V0 405 aa11.34□□□□□ -0.59
CDK5RAP3-218ENST00000580391 IGLV2-11P01706 119 aa11.34□□□□□ -0.59
CDK5RAP3-218ENST00000580391 FOLR2P14207 255 aa11.34□□□□□ -0.59
CDK5RAP3-218ENST00000580391 ERVFC1-1P60608 527 aa11.34□□□□□ -0.59
CDK5RAP3-218ENST00000580391 PSG9Q00887 426 aa11.34□□□□□ -0.59
CDK5RAP3-218ENST00000580391 GLMPQ8WWB7 406 aa11.34□□□□□ -0.59
CDK5RAP3-218ENST00000580391 ZNF253O75346 499 aa11.34□□□□□ -0.59
CDK5RAP3-218ENST00000580391 LY6G6DO95868 133 aa11.34□□□□□ -0.59
CDK5RAP3-218ENST00000580391 C16orf54Q6UWD8 224 aa11.34□□□□□ -0.59
CDK5RAP3-218ENST00000580391 C1QL4Q86Z23 238 aa11.34□□□□□ -0.59
CDK5RAP3-218ENST00000580391 RNF152Q8N8N0 203 aa11.34□□□□□ -0.59
CDK5RAP3-218ENST00000580391 ZNF331Q9NQX6 463 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-218ENST00000580391 TMEM160Q9NX00 188 aa11.34□□□□□ -0.59
CDK5RAP3-218ENST00000580391 A0A1W2PPQ1 181 aa11.33□□□□□ -0.6
CDK5RAP3-218ENST00000580391 DIRC3C9JPN6 131 aa11.33□□□□□ -0.6
CDK5RAP3-218ENST00000580391 LTAP01374 205 aa11.33□□□□□ -0.6
CDK5RAP3-218ENST00000580391 LGALS1P09382 135 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-218ENST00000580391 EDN2P20800 178 aa11.33□□□□□ -0.6
CDK5RAP3-218ENST00000580391 S100PP25815 95 aa11.33□□□□□ -0.6
CDK5RAP3-218ENST00000580391 KLHDC1Q8N7A1 406 aa11.33□□□□□ -0.6
CDK5RAP3-218ENST00000580391 FAM210BQ96KR6 192 aa11.33□□□□□ -0.6
CDK5RAP3-218ENST00000580391 ASCL2Q99929 193 aa11.33□□□□□ -0.6
CDK5RAP3-218ENST00000580391 V9GYV3 84 aa11.33□□□□□ -0.6
CDK5RAP3-218ENST00000580391 TRBV24-1A0A075B6N3 115 aa11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 LOC105371267A0A1B0GV96 52 aa11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 SRD5A1P18405 259 aa11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 RPS10P46783 165 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 FAM3BP58499 235 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 TM4SF20Q53R12 229 aa11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 IBA57Q5T440 356 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 PRR27Q6MZM9 219 aa11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 ZFP82Q8N141 532 aa11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 MLST8Q9BVC4 326 aa11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 IGHV4OR15-8A0A075B7B6 117 aa11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 A0A087WW49 117 aa11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 IGKV2-40A0A087WW87 121 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 IGKV2D-40P01614 121 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 S100A9P06702 114 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 C18orf65Q6ZTR6 163 aa11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 PRNTQ86SH4 94 aa11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 TMEM75Q8N9X5 138 aa11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 UBE2E2Q96LR5 201 aa11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 OSTCQ9NRP0 149 aa11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 MLXQ9UH92 298 aa11.32□□□□□ -0.6
CDK5RAP3-218ENST00000580391 RPEL1Q2QD12 228 aa11.31□□□□□ -0.6
CDK5RAP3-218ENST00000580391 C8orf86Q6ZUL3 223 aa11.31□□□□□ -0.6
CDK5RAP3-218ENST00000580391 RNF182Q8N6D2 247 aa11.31□□□□□ -0.6
CDK5RAP3-218ENST00000580391 PYGO2Q9BRQ0 406 aa11.31□□□□□ -0.6
CDK5RAP3-218ENST00000580391 DAZ1Q9NQZ3 744 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-218ENST00000580391 IGHV7-4-1A0A0J9YVY3 117 aa11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 ZNF705FA8MVS1 300 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 CHEK1O14757 476 aa11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 CSN1S1P47710 185 aa11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 FLI1Q01543 452 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-218ENST00000580391 SCGB2A2Q13296 93 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms