RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 RPL11P62913 178 aaKnown RBP8.11□□□□□ -1.11
SS18-213ENST00000579640 PAFAH1B2P68402 229 aa8.11□□□□□ -1.11
SS18-213ENST00000579640 RBPMS2Q6ZRY4 209 aaKnown RBP8.11□□□□□ -1.11
SS18-213ENST00000579640 LYPD1Q8N2G4 141 aa8.11□□□□□ -1.11
SS18-213ENST00000579640 SLC50A1Q9BRV3 221 aa8.11□□□□□ -1.11
SS18-213ENST00000579640 NKX6-2Q9C056 277 aaPredicted RBP8.11□□□□□ -1.11
SS18-213ENST00000579640 NRN1Q9NPD7 142 aa8.11□□□□□ -1.11
SS18-213ENST00000579640 MED9Q9NWA0 146 aa8.11□□□□□ -1.11
SS18-213ENST00000579640 GNG13Q9P2W3 67 aa8.11□□□□□ -1.11
SS18-213ENST00000579640 TRAV2A0A0B4J234 112 aa8.1□□□□□ -1.11
SS18-213ENST00000579640 PSG9Q00887 426 aa8.1□□□□□ -1.11
SS18-213ENST00000579640 C9orf66Q5T8R8 295 aa8.1□□□□□ -1.11
SS18-213ENST00000579640 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.1□□□□□ -1.11
SS18-213ENST00000579640 BLNKQ8WV28 456 aa8.1□□□□□ -1.11
SS18-213ENST00000579640 TXNDC17Q9BRA2 123 aa8.1□□□□□ -1.11
SS18-213ENST00000579640 CLEC5AQ9NY25 188 aa8.1□□□□□ -1.11
SS18-213ENST00000579640 TSPAN4O14817 238 aa8.1□□□□□ -1.11
SS18-213ENST00000579640 IGLV1-51P01701 117 aa8.1□□□□□ -1.11
SS18-213ENST00000579640 BCL2P10415 239 aa8.1□□□□□ -1.11
SS18-213ENST00000579640 FAM210AQ96ND0 272 aa8.1□□□□□ -1.11
SS18-213ENST00000579640 GPR61Q9BZJ8 451 aa8.1□□□□□ -1.11
SS18-213ENST00000579640 LINC00862A6NCI5 91 aa8.09□□□□□ -1.11
SS18-213ENST00000579640 FAM74A7A6NL05 159 aa8.09□□□□□ -1.11
SS18-213ENST00000579640 PAGE4O60829 102 aa8.09□□□□□ -1.11
SS18-213ENST00000579640 NDUFB4O95168 129 aa8.09□□□□□ -1.11
SS18-213ENST00000579640 CD300EQ496F6 205 aaPredicted RBP8.09□□□□□ -1.11
SS18-213ENST00000579640 TMEM61Q8N0U2 210 aa8.09□□□□□ -1.11
SS18-213ENST00000579640 C17orf77Q96MU5 243 aa8.09□□□□□ -1.11
SS18-213ENST00000579640 SPAG8Q99932 426 aaPredicted RBP8.09□□□□□ -1.11
SS18-213ENST00000579640 MS4A6AQ9H2W1 248 aa8.09□□□□□ -1.11
SS18-213ENST00000579640 AAMDCQ9H7C9 122 aa8.09□□□□□ -1.11
SS18-213ENST00000579640 ZNF331Q9NQX6 463 aaPredicted RBP8.09□□□□□ -1.11
SS18-213ENST00000579640 OTORQ9NRC9 128 aa8.09□□□□□ -1.11
SS18-213ENST00000579640 VAX2Q9UIW0 290 aa8.09□□□□□ -1.11
SS18-213ENST00000579640 LOC102723971A0A1B0GUV8 181 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 RAB19A4D1S5 217 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 RBFOX3A6NFN3 312 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 H3BTX0 84 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 DNASE2O00115 360 aaPredicted RBP8.08□□□□□ -1.12
SS18-213ENST00000579640 ISLRO14498 428 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 SNRPCP09234 159 aaKnown RBP8.08□□□□□ -1.12
SS18-213ENST00000579640 ID1P41134 155 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 UBE2G2P60604 165 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 RANP62826 216 aaKnown RBP8.08□□□□□ -1.12
SS18-213ENST00000579640 HAGHQ16775 308 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 LCN12Q6JVE5 192 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 C16orf92Q96LL3 132 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 TCEAL7Q9BRU2 100 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 Q9H3A6 140 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 PRELID1Q9Y255 219 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 STAB1Q9NY15 2570 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 IGKV3-7A0A075B6H7 116 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 SLC17A3O00476 420 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 SOCS3O14543 225 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 NDUFS6O75380 124 aaKnown RBP8.08□□□□□ -1.12
SS18-213ENST00000579640 ZNF506Q5JVG8 444 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 PRR31Q5SQ13 230 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 CST9LP1Q5W188 147 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 DCANP1Q8TF63 244 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 SMDT1Q9H4I9 107 aa8.08□□□□□ -1.12
SS18-213ENST00000579640 YTHDF2Q9Y5A9 579 aaKnown RBP8.08□□□□□ -1.12
SS18-213ENST00000579640 PGPA6NDG6 321 aa8.07□□□□□ -1.12
SS18-213ENST00000579640 OR4C46A6NHA9 309 aa8.07□□□□□ -1.12
SS18-213ENST00000579640 C11orf94C9JXX5 98 aa8.07□□□□□ -1.12
SS18-213ENST00000579640 K7EQG2 157 aa8.07□□□□□ -1.12
SS18-213ENST00000579640 MEF2BQ02080 365 aaPredicted RBP8.07□□□□□ -1.12
SS18-213ENST00000579640 PEA15Q15121 130 aa8.07□□□□□ -1.12
SS18-213ENST00000579640 NDUFA5Q16718 116 aa8.07□□□□□ -1.12
SS18-213ENST00000579640 TOR2AQ5JU69 321 aa8.07□□□□□ -1.12
SS18-213ENST00000579640 GBGT1Q8N5D6 347 aa8.07□□□□□ -1.12
SS18-213ENST00000579640 ARL6IP6Q8N6S5 226 aa8.07□□□□□ -1.12
SS18-213ENST00000579640 RXFP4Q8TDU9 374 aa8.07□□□□□ -1.12
SS18-213ENST00000579640 MRPL53Q96EL3 112 aaKnown RBP8.07□□□□□ -1.12
SS18-213ENST00000579640 EIF5A2Q9GZV4 153 aaKnown RBP8.07□□□□□ -1.12
SS18-213ENST00000579640 SELENOKQ9Y6D0 94 aa8.07□□□□□ -1.12
SS18-213ENST00000579640 TRAV8-2A0A0B4J237 113 aa8.06□□□□□ -1.12
SS18-213ENST00000579640 GGTLC3B5MD39 225 aa8.06□□□□□ -1.12
SS18-213ENST00000579640 WIPF1O43516 503 aa8.06□□□□□ -1.12
SS18-213ENST00000579640 SNRPD3P62318 126 aaKnown RBP8.06□□□□□ -1.12
SS18-213ENST00000579640 SUMO1P63165 101 aaKnown RBP8.06□□□□□ -1.12
SS18-213ENST00000579640 ICAM4Q14773 271 aa8.06□□□□□ -1.12
SS18-213ENST00000579640 CCDC28AQ8IWP9 274 aa8.06□□□□□ -1.12
SS18-213ENST00000579640 C5orf17Q8NAS9 161 aa8.06□□□□□ -1.12
SS18-213ENST00000579640 CMTM2Q8TAZ6 248 aa8.06□□□□□ -1.12
SS18-213ENST00000579640 F6UZH7 168 aa8.06□□□□□ -1.12
SS18-213ENST00000579640 PDE6DO43924 150 aa8.06□□□□□ -1.12
SS18-213ENST00000579640 CSN1S1P47710 185 aa8.06□□□□□ -1.12
SS18-213ENST00000579640 ATP5G3P48201 142 aa8.06□□□□□ -1.12
SS18-213ENST00000579640 TFPI2P48307 235 aa8.06□□□□□ -1.12
SS18-213ENST00000579640 CMC4P56277 68 aaPredicted RBP8.06□□□□□ -1.12
SS18-213ENST00000579640 PSG3Q16557 428 aa8.06□□□□□ -1.12
SS18-213ENST00000579640 UQCC3Q6UW78 93 aa8.06□□□□□ -1.12
SS18-213ENST00000579640 COMMD7Q86VX2 200 aa8.06□□□□□ -1.12
SS18-213ENST00000579640 WFDC3Q8IUB2 231 aa8.06□□□□□ -1.12
SS18-213ENST00000579640 EXOC3-AS1Q8N2X6 119 aa8.06□□□□□ -1.12
SS18-213ENST00000579640 RARRES2Q99969 163 aa8.06□□□□□ -1.12
SS18-213ENST00000579640 SLC25A5P05141 298 aaKnown RBP8.05□□□□□ -1.12
SS18-213ENST00000579640 IGLL1P15814 213 aa8.05□□□□□ -1.12
SS18-213ENST00000579640 CD81P60033 236 aa8.05□□□□□ -1.12
SS18-213ENST00000579640 GUCA2BQ16661 112 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms