RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 C1QTNF4Q9BXJ3 329 aa10.52□□□□□ -0.73
MKS1-207ENST00000578789 KCNIP2Q9NS61 270 aa10.52□□□□□ -0.73
MKS1-207ENST00000578789 CSMD3Q7Z407 3707 aa10.51□□□□□ -0.73
MKS1-207ENST00000578789 F6UB75 175 aa10.51□□□□□ -0.73
MKS1-207ENST00000578789 IGLC2P0DOY2 106 aa10.51□□□□□ -0.73
MKS1-207ENST00000578789 RNF182Q8N6D2 247 aa10.51□□□□□ -0.73
MKS1-207ENST00000578789 ZNF709Q8N972 641 aa10.51□□□□□ -0.73
MKS1-207ENST00000578789 SLC50A1Q9BRV3 221 aa10.51□□□□□ -0.73
MKS1-207ENST00000578789 GIPP09681 153 aaPredicted RBP10.5□□□□□ -0.73
MKS1-207ENST00000578789 IGFL4Q6B9Z1 124 aa10.5□□□□□ -0.73
MKS1-207ENST00000578789 Q8NAQ8 132 aa10.5□□□□□ -0.73
MKS1-207ENST00000578789 PARD6GQ9BYG4 376 aaPredicted RBP10.5□□□□□ -0.73
MKS1-207ENST00000578789 HRH4Q9H3N8 390 aa10.5□□□□□ -0.73
MKS1-207ENST00000578789 ZNF331Q9NQX6 463 aaPredicted RBP10.5□□□□□ -0.73
MKS1-207ENST00000578789 CLEC5AQ9NY25 188 aa10.5□□□□□ -0.73
MKS1-207ENST00000578789 X6R8D5 127 aa10.5□□□□□ -0.73
MKS1-207ENST00000578789 TRAV5A0A0B4J249 113 aa10.49□□□□□ -0.73
MKS1-207ENST00000578789 MIFP14174 115 aa10.49□□□□□ -0.73
MKS1-207ENST00000578789 PSG9Q00887 426 aa10.49□□□□□ -0.73
MKS1-207ENST00000578789 GCSAMLQ5JQS6 135 aa10.49□□□□□ -0.73
MKS1-207ENST00000578789 FAM78BQ5VT40 261 aa10.49□□□□□ -0.73
MKS1-207ENST00000578789 ZNF738Q8NE65 137 aa10.49□□□□□ -0.73
MKS1-207ENST00000578789 OR4B1Q8NGF8 309 aa10.49□□□□□ -0.73
MKS1-207ENST00000578789 TMEM14CQ9P0S9 112 aa10.49□□□□□ -0.73
MKS1-207ENST00000578789 XCL2Q9UBD3 114 aa10.49□□□□□ -0.73
MKS1-207ENST00000578789 DYNC2H1Q8NCM8 4307 aaKnown RBP10.48□□□□□ -0.73
MKS1-207ENST00000578789 C17orf112F2Z3M2 114 aa10.48□□□□□ -0.73
MKS1-207ENST00000578789 H3BQ15 152 aa10.48□□□□□ -0.73
MKS1-207ENST00000578789 SLC17A3O00476 420 aa10.48□□□□□ -0.73
MKS1-207ENST00000578789 ZNF253O75346 499 aa10.48□□□□□ -0.73
MKS1-207ENST00000578789 DUSP14O95147 198 aaKnown RBP10.48□□□□□ -0.73
MKS1-207ENST00000578789 IGKV3-20P01619 116 aa10.48□□□□□ -0.73
MKS1-207ENST00000578789 HLA-DMBP28068 263 aa10.48□□□□□ -0.73
MKS1-207ENST00000578789 PSG3Q16557 428 aa10.48□□□□□ -0.73
MKS1-207ENST00000578789 GUK1Q16774 197 aa10.48□□□□□ -0.73
MKS1-207ENST00000578789 AMTNQ6UX39 209 aa10.48□□□□□ -0.73
MKS1-207ENST00000578789 LRRC20Q8TCA0 184 aa10.48□□□□□ -0.73
MKS1-207ENST00000578789 SAT2Q96F10 170 aaPredicted RBP10.48□□□□□ -0.73
MKS1-207ENST00000578789 SMIM3Q9BZL3 60 aa10.48□□□□□ -0.73
MKS1-207ENST00000578789 SLC35B3Q9H1N7 401 aa10.48□□□□□ -0.73
MKS1-207ENST00000578789 WFDC1Q9HC57 220 aa10.48□□□□□ -0.73
MKS1-207ENST00000578789 IGHV4-28A0A0C4DH34 117 aa10.47□□□□□ -0.73
MKS1-207ENST00000578789 IFNA5P01569 189 aa10.47□□□□□ -0.73
MKS1-207ENST00000578789 CNN1P51911 297 aaKnown RBP10.47□□□□□ -0.73
MKS1-207ENST00000578789 ZNF705AQ6ZN79 300 aaPredicted RBP10.47□□□□□ -0.73
MKS1-207ENST00000578789 AQP10Q96PS8 301 aa10.47□□□□□ -0.73
MKS1-207ENST00000578789 MRPL32Q9BYC8 188 aaKnown RBP10.47□□□□□ -0.73
MKS1-207ENST00000578789 MFFQ9GZY8 342 aa10.47□□□□□ -0.73
MKS1-207ENST00000578789 ZNF705FA8MVS1 300 aaPredicted RBP10.46□□□□□ -0.73
MKS1-207ENST00000578789 SNRPCP09234 159 aaKnown RBP10.46□□□□□ -0.73
MKS1-207ENST00000578789 ZNF705DP0CH99 300 aaPredicted RBP10.46□□□□□ -0.73
MKS1-207ENST00000578789 ZNF705BP0CI00 300 aaPredicted RBP10.46□□□□□ -0.73
MKS1-207ENST00000578789 FXYD7P58549 80 aa10.46□□□□□ -0.73
MKS1-207ENST00000578789 Q5BKY6 102 aa10.46□□□□□ -0.73
MKS1-207ENST00000578789 OR8A1Q8NGG7 326 aa10.46□□□□□ -0.73
MKS1-207ENST00000578789 SCGB1C1Q8TD33 95 aa10.46□□□□□ -0.73
MKS1-207ENST00000578789 RPUSD4Q96CM3 377 aaKnown RBP10.46□□□□□ -0.73
MKS1-207ENST00000578789 FAM167A-AS1Q96KT0 104 aa10.46□□□□□ -0.73
MKS1-207ENST00000578789 NEU1Q99519 415 aa10.46□□□□□ -0.73
MKS1-207ENST00000578789 SLC25A2Q9BXI2 301 aa10.46□□□□□ -0.73
MKS1-207ENST00000578789 ZNF586Q9NXT0 402 aa10.46□□□□□ -0.73
MKS1-207ENST00000578789 TRBV19A0A075B6N1 114 aa10.45□□□□□ -0.74
MKS1-207ENST00000578789 H3BTX0 84 aa10.45□□□□□ -0.74
MKS1-207ENST00000578789 AMBPP02760 352 aa10.45□□□□□ -0.74
MKS1-207ENST00000578789 RBMY1A1P0DJD3 496 aaKnown RBP10.45□□□□□ -0.74
MKS1-207ENST00000578789 RBMY1CP0DJD4 496 aa10.45□□□□□ -0.74
MKS1-207ENST00000578789 HIST1H1EP10412 219 aaKnown RBP10.45□□□□□ -0.74
MKS1-207ENST00000578789 PDE6HQ13956 83 aa10.45□□□□□ -0.74
MKS1-207ENST00000578789 RBMY1FQ15415 496 aaKnown RBP10.45□□□□□ -0.74
MKS1-207ENST00000578789 MIR17HGQ75NE6 70 aa10.45□□□□□ -0.74
MKS1-207ENST00000578789 FUT9Q9Y231 359 aa10.45□□□□□ -0.74
MKS1-207ENST00000578789 DEFB4AO15263 64 aa10.44□□□□□ -0.74
MKS1-207ENST00000578789 PYYP10082 97 aa10.44□□□□□ -0.74
MKS1-207ENST00000578789 HIST1H1AQ02539 215 aaPredicted RBP10.44□□□□□ -0.74
MKS1-207ENST00000578789 FFAR4Q5NUL3 377 aa10.44□□□□□ -0.74
MKS1-207ENST00000578789 MRPL53Q96EL3 112 aaKnown RBP10.44□□□□□ -0.74
MKS1-207ENST00000578789 TIMM9Q9Y5J7 89 aa10.44□□□□□ -0.74
MKS1-207ENST00000578789 CXorf65A6NEN9 183 aa10.43□□□□□ -0.74
MKS1-207ENST00000578789 NUPR2A6NF83 97 aa10.43□□□□□ -0.74
MKS1-207ENST00000578789 SMIM9A6NGZ8 99 aa10.43□□□□□ -0.74
MKS1-207ENST00000578789 G3V3Q6 166 aa10.43□□□□□ -0.74
MKS1-207ENST00000578789 BOLA2-SMG1P6H3BVE0 249 aa10.43□□□□□ -0.74
MKS1-207ENST00000578789 CRXO43186 299 aaPredicted RBP10.43□□□□□ -0.74
MKS1-207ENST00000578789 NDUFB4O95168 129 aa10.43□□□□□ -0.74
MKS1-207ENST00000578789 PMS2P11Q13670 270 aa10.43□□□□□ -0.74
MKS1-207ENST00000578789 ZNF266Q14584 549 aa10.43□□□□□ -0.74
MKS1-207ENST00000578789 C1orf158Q8N1D5 194 aa10.43□□□□□ -0.74
MKS1-207ENST00000578789 OR2T35Q8NGX2 323 aa10.43□□□□□ -0.74
MKS1-207ENST00000578789 C11orf45Q8TAV5 145 aa10.43□□□□□ -0.74
MKS1-207ENST00000578789 IGF2BP2-AS1Q96M15 143 aa10.43□□□□□ -0.74
MKS1-207ENST00000578789 GOLT1BQ9Y3E0 138 aa10.43□□□□□ -0.74
MKS1-207ENST00000578789 RNF222A6NCQ9 220 aa10.42□□□□□ -0.74
MKS1-207ENST00000578789 SPINK13Q1W4C9 94 aa10.42□□□□□ -0.74
MKS1-207ENST00000578789 OR51M1Q9H341 326 aa10.42□□□□□ -0.74
MKS1-207ENST00000578789 TNFSF18Q9UNG2 199 aa10.42□□□□□ -0.74
MKS1-207ENST00000578789 TENM2Q9NT68 2774 aa10.42□□□□□ -0.74
MKS1-207ENST00000578789 FXYD6-FXYD2A0A087WZ82 144 aa10.41□□□□□ -0.74
MKS1-207ENST00000578789 LCE6AA0A183 80 aa10.41□□□□□ -0.74
MKS1-207ENST00000578789 PRAC2D3DTV9 90 aa10.41□□□□□ -0.74
MKS1-207ENST00000578789 M0R2Z0 102 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms