RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 SAMD13Q5VXD3 122 aa8.36□□□□□ -1.07
CDK5RAP3-204ENST00000577664 FAM122CQ6P4D5 195 aa8.36□□□□□ -1.07
CDK5RAP3-204ENST00000577664 SIGLEC15Q6ZMC9 328 aa8.36□□□□□ -1.07
CDK5RAP3-204ENST00000577664 ZNF767PQ75MW2 155 aa8.36□□□□□ -1.07
CDK5RAP3-204ENST00000577664 B9D2Q9BPU9 175 aa8.36□□□□□ -1.07
CDK5RAP3-204ENST00000577664 ZNF785A8K8V0 405 aa8.35□□□□□ -1.07
CDK5RAP3-204ENST00000577664 SAP30O75446 220 aa8.35□□□□□ -1.07
CDK5RAP3-204ENST00000577664 H2AFB1P0C5Y9 115 aa8.35□□□□□ -1.07
CDK5RAP3-204ENST00000577664 GALR1P47211 349 aa8.35□□□□□ -1.07
CDK5RAP3-204ENST00000577664 CD300EQ496F6 205 aaPredicted RBP8.35□□□□□ -1.07
CDK5RAP3-204ENST00000577664 LEMD1Q68G75 181 aa8.35□□□□□ -1.07
CDK5RAP3-204ENST00000577664 SSX7Q7RTT5 188 aa8.35□□□□□ -1.07
CDK5RAP3-204ENST00000577664 TCF24Q7RTU0 167 aa8.35□□□□□ -1.07
CDK5RAP3-204ENST00000577664 LYPD1Q8N2G4 141 aa8.35□□□□□ -1.07
CDK5RAP3-204ENST00000577664 DCANP1Q8TF63 244 aa8.35□□□□□ -1.07
CDK5RAP3-204ENST00000577664 FXYD5Q96DB9 178 aa8.35□□□□□ -1.07
CDK5RAP3-204ENST00000577664 SPAG8Q99932 426 aaPredicted RBP8.35□□□□□ -1.07
CDK5RAP3-204ENST00000577664 FAM110AQ9BQ89 295 aa8.35□□□□□ -1.07
CDK5RAP3-204ENST00000577664 CLEC5AQ9NY25 188 aa8.35□□□□□ -1.07
CDK5RAP3-204ENST00000577664 UBQLN2Q9UHD9 624 aa8.35□□□□□ -1.07
CDK5RAP3-204ENST00000577664 ZNF256Q9Y2P7 627 aaPredicted RBP8.35□□□□□ -1.07
CDK5RAP3-204ENST00000577664 TRBV19A0A075B6N1 114 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 IGHV3OR16-13A0A075B7E8 117 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 IGHV3-49A0A0A0MS15 119 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 IGHV3-74A0A0B4J1X5 117 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 H3BQ15 152 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 SOCS3O14543 225 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 RGS13O14921 159 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 HBE1P02100 147 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 NBEAP1P0C6P0 100 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 PSMB3P49720 205 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 EGFEM1PQ0D2K5 195 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 FAM74A1Q5RGS3 127 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 TMEM61Q8N0U2 210 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 ARL6IP6Q8N6S5 226 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 FAM213BQ8TBF2 198 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 PAXXQ9BUH6 204 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 SLC25A22Q9H936 323 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 NRN1Q9NPD7 142 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 TMEM167BQ9NRX6 74 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 ZNF586Q9NXT0 402 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 ARL2-SNX15V9GYD0 113 aa8.34□□□□□ -1.07
CDK5RAP3-204ENST00000577664 IGHV3-66A0A0C4DH42 116 aa8.33□□□□□ -1.08
CDK5RAP3-204ENST00000577664 MAP1LC3B2A6NCE7 125 aa8.33□□□□□ -1.08
CDK5RAP3-204ENST00000577664 ZNF705EA8MWA4 302 aaPredicted RBP8.33□□□□□ -1.08
CDK5RAP3-204ENST00000577664 TEX46H3BTG2 121 aa8.33□□□□□ -1.08
CDK5RAP3-204ENST00000577664 K7EQG2 157 aa8.33□□□□□ -1.08
CDK5RAP3-204ENST00000577664 ARL14EPLP0DKL9 152 aa8.33□□□□□ -1.08
CDK5RAP3-204ENST00000577664 IGLL1P15814 213 aa8.33□□□□□ -1.08
CDK5RAP3-204ENST00000577664 GCHFRP30047 84 aa8.33□□□□□ -1.08
CDK5RAP3-204ENST00000577664 PAFAH1B2P68402 229 aa8.33□□□□□ -1.08
CDK5RAP3-204ENST00000577664 LCN12Q6JVE5 192 aa8.33□□□□□ -1.08
CDK5RAP3-204ENST00000577664 RBPMS2Q6ZRY4 209 aaKnown RBP8.33□□□□□ -1.08
CDK5RAP3-204ENST00000577664 DYNLRB2Q8TF09 96 aa8.33□□□□□ -1.08
CDK5RAP3-204ENST00000577664 SFT2D1Q8WV19 159 aa8.33□□□□□ -1.08
CDK5RAP3-204ENST00000577664 MAP1LC3BQ9GZQ8 125 aa8.33□□□□□ -1.08
CDK5RAP3-204ENST00000577664 MS4A6AQ9H2W1 248 aa8.33□□□□□ -1.08
CDK5RAP3-204ENST00000577664 ZMAT5Q9UDW3 170 aaKnown RBP8.33□□□□□ -1.08
CDK5RAP3-204ENST00000577664 A0A1W2PRE2 83 aa8.32□□□□□ -1.08
CDK5RAP3-204ENST00000577664 ISLRO14498 428 aa8.32□□□□□ -1.08
CDK5RAP3-204ENST00000577664 OR7C2O60412 319 aa8.32□□□□□ -1.08
CDK5RAP3-204ENST00000577664 NDUFB4O95168 129 aa8.32□□□□□ -1.08
CDK5RAP3-204ENST00000577664 PYYP10082 97 aa8.32□□□□□ -1.08
CDK5RAP3-204ENST00000577664 PPT1P50897 306 aa8.32□□□□□ -1.08
CDK5RAP3-204ENST00000577664 CMC4P56277 68 aaPredicted RBP8.32□□□□□ -1.08
CDK5RAP3-204ENST00000577664 LCN15Q6UWW0 184 aa8.32□□□□□ -1.08
CDK5RAP3-204ENST00000577664 SLC50A1Q9BRV3 221 aa8.32□□□□□ -1.08
CDK5RAP3-204ENST00000577664 NKX6-2Q9C056 277 aaPredicted RBP8.32□□□□□ -1.08
CDK5RAP3-204ENST00000577664 ZNF331Q9NQX6 463 aaPredicted RBP8.32□□□□□ -1.08
CDK5RAP3-204ENST00000577664 U3KQK5 164 aa8.32□□□□□ -1.08
CDK5RAP3-204ENST00000577664 IZUMO1RA6ND01 250 aa8.31□□□□□ -1.08
CDK5RAP3-204ENST00000577664 HMGB3O15347 200 aaKnown RBP8.31□□□□□ -1.08
CDK5RAP3-204ENST00000577664 NDUFS6O75380 124 aaKnown RBP8.31□□□□□ -1.08
CDK5RAP3-204ENST00000577664 NMBP08949 121 aa8.31□□□□□ -1.08
CDK5RAP3-204ENST00000577664 ATF4P18848 351 aaPredicted RBP8.31□□□□□ -1.08
CDK5RAP3-204ENST00000577664 PSG9Q00887 426 aa8.31□□□□□ -1.08
CDK5RAP3-204ENST00000577664 CLLU1Q5K131 121 aa8.31□□□□□ -1.08
CDK5RAP3-204ENST00000577664 TRAV8-2A0A0B4J237 113 aa8.3□□□□□ -1.08
CDK5RAP3-204ENST00000577664 OR4C46A6NHA9 309 aa8.3□□□□□ -1.08
CDK5RAP3-204ENST00000577664 NHLRC4P0CG21 123 aaPredicted RBP8.3□□□□□ -1.08
CDK5RAP3-204ENST00000577664 TAGLN2P37802 199 aaKnown RBP8.3□□□□□ -1.08
CDK5RAP3-204ENST00000577664 UBE2L3P68036 154 aaKnown RBP8.3□□□□□ -1.08
CDK5RAP3-204ENST00000577664 CCL20P78556 96 aa8.3□□□□□ -1.08
CDK5RAP3-204ENST00000577664 CCDC28AQ8IWP9 274 aa8.3□□□□□ -1.08
CDK5RAP3-204ENST00000577664 MUC7Q8TAX7 377 aa8.3□□□□□ -1.08
CDK5RAP3-204ENST00000577664 MRPL53Q96EL3 112 aaKnown RBP8.3□□□□□ -1.08
CDK5RAP3-204ENST00000577664 TXNDC17Q9BRA2 123 aa8.3□□□□□ -1.08
CDK5RAP3-204ENST00000577664 PRELID1Q9Y255 219 aa8.3□□□□□ -1.08
CDK5RAP3-204ENST00000577664 FRAS1Q86XX4 4008 aa8.29□□□□□ -1.08
CDK5RAP3-204ENST00000577664 DNASE2O00115 360 aaPredicted RBP8.29□□□□□ -1.08
CDK5RAP3-204ENST00000577664 EIF3GO75821 320 aaKnown RBP eCLIP8.29□□□□□ -1.08
CDK5RAP3-204ENST00000577664 OR10J4P0C629 311 aa8.29□□□□□ -1.08
CDK5RAP3-204ENST00000577664 ID1P41134 155 aa8.29□□□□□ -1.08
CDK5RAP3-204ENST00000577664 FGF8P55075 233 aaPredicted RBP8.29□□□□□ -1.08
CDK5RAP3-204ENST00000577664 RPL11P62913 178 aaKnown RBP8.29□□□□□ -1.08
CDK5RAP3-204ENST00000577664 DEFB121Q5J5C9 76 aa8.29□□□□□ -1.08
CDK5RAP3-204ENST00000577664 TCEAL7Q9BRU2 100 aa8.29□□□□□ -1.08
CDK5RAP3-204ENST00000577664 TMPRSS5Q9H3S3 457 aa8.29□□□□□ -1.08
CDK5RAP3-204ENST00000577664 C19orf73Q9NVV2 129 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 1078.6 ms