RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 NOL4LQ96MY1 436 aaPredicted RBP7.81□□□□□ -1.16
SS18-207ENST00000577636 C20orf24Q9BUV8 137 aa7.81□□□□□ -1.16
SS18-207ENST00000577636 F8W735 103 aaPredicted RBP7.8□□□□□ -1.16
SS18-207ENST00000577636 NDUFB4O95168 129 aa7.8□□□□□ -1.16
SS18-207ENST00000577636 MT-ND4LP03901 98 aa7.8□□□□□ -1.16
SS18-207ENST00000577636 HIST1H1EP10412 219 aaKnown RBP7.8□□□□□ -1.16
SS18-207ENST00000577636 RPL7P18124 248 aaKnown RBP7.8□□□□□ -1.16
SS18-207ENST00000577636 ADIRFQ15847 76 aa7.8□□□□□ -1.16
SS18-207ENST00000577636 MORN5Q5VZ52 161 aa7.8□□□□□ -1.16
SS18-207ENST00000577636 TEX38Q6PEX7 206 aa7.8□□□□□ -1.16
SS18-207ENST00000577636 ZNF329Q86UD4 541 aa7.8□□□□□ -1.16
SS18-207ENST00000577636 CMTM2Q8TAZ6 248 aa7.8□□□□□ -1.16
SS18-207ENST00000577636 BLNKQ8WV28 456 aa7.8□□□□□ -1.16
SS18-207ENST00000577636 FXYD5Q96DB9 178 aa7.8□□□□□ -1.16
SS18-207ENST00000577636 ZNF503Q96F45 646 aa7.8□□□□□ -1.16
SS18-207ENST00000577636 GPR82Q96P67 336 aa7.8□□□□□ -1.16
SS18-207ENST00000577636 METTL26Q96S19 204 aa7.8□□□□□ -1.16
SS18-207ENST00000577636 CHRDL1Q9BU40 450 aa7.8□□□□□ -1.16
SS18-207ENST00000577636 COL7A1Q02388 2944 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 A0A087WWC5 75 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 HELTA6NFD8 242 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 ZNF98A6NK75 572 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 IGLV1-40P01703 118 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 IGHG4P01861 327 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 GP9P14770 177 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 AKR1C3P42330 323 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 CNN1P51911 297 aaKnown RBP7.79□□□□□ -1.16
SS18-207ENST00000577636 RANP62826 216 aaKnown RBP7.79□□□□□ -1.16
SS18-207ENST00000577636 USF2Q15853 346 aaPredicted RBP7.79□□□□□ -1.16
SS18-207ENST00000577636 LEMD1Q68G75 181 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 TOMM20LQ6UXN7 152 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 C18orf65Q6ZTR6 163 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 C8orf86Q6ZUL3 223 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 OR8I2Q8N0Y5 310 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 HIST1H2BAQ96A08 127 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 C11orf52Q96A22 123 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 CCDC140Q96MF4 163 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 DUX3Q96PT4 197 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 PRR25Q96S07 402 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 MCRIP2Q9BUT9 160 aaKnown RBP7.79□□□□□ -1.16
SS18-207ENST00000577636 CTDSP1Q9GZU7 261 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 SDF2L1Q9HCN8 221 aa7.79□□□□□ -1.16
SS18-207ENST00000577636 SCO2A0A1W2PP80 73 aa7.78□□□□□ -1.16
SS18-207ENST00000577636 CXorf65A6NEN9 183 aa7.78□□□□□ -1.16
SS18-207ENST00000577636 K7EQM0 130 aa7.78□□□□□ -1.16
SS18-207ENST00000577636 TSPAN4O14817 238 aa7.78□□□□□ -1.16
SS18-207ENST00000577636 SLC25A5P05141 298 aaKnown RBP7.78□□□□□ -1.16
SS18-207ENST00000577636 S100A9P06702 114 aaKnown RBP7.78□□□□□ -1.16
SS18-207ENST00000577636 ELANEP08246 267 aa7.78□□□□□ -1.16
SS18-207ENST00000577636 ATF4P18848 351 aaPredicted RBP7.78□□□□□ -1.16
SS18-207ENST00000577636 NPPCP23582 126 aa7.78□□□□□ -1.16
SS18-207ENST00000577636 CRYBB3P26998 211 aa7.78□□□□□ -1.16
SS18-207ENST00000577636 ADMP35318 185 aa7.78□□□□□ -1.16
SS18-207ENST00000577636 GNG4P50150 75 aa7.78□□□□□ -1.16
SS18-207ENST00000577636 UBE2G1P62253 170 aa7.78□□□□□ -1.16
SS18-207ENST00000577636 DMRTA1Q5VZB9 504 aa7.78□□□□□ -1.16
SS18-207ENST00000577636 TMEM88Q6PEY1 159 aa7.78□□□□□ -1.16
SS18-207ENST00000577636 LYPD1Q8N2G4 141 aa7.78□□□□□ -1.16
SS18-207ENST00000577636 GRAMD2BQ96HH9 432 aa7.78□□□□□ -1.16
SS18-207ENST00000577636 AAMDCQ9H7C9 122 aa7.78□□□□□ -1.16
SS18-207ENST00000577636 ZMAT5Q9UDW3 170 aaKnown RBP7.78□□□□□ -1.16
SS18-207ENST00000577636 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.77□□□□□ -1.17
SS18-207ENST00000577636 PGPA6NDG6 321 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 GGTLC3B5MD39 225 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 C9JCJ5 164 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 DNASE2O00115 360 aaPredicted RBP7.77□□□□□ -1.17
SS18-207ENST00000577636 NDUFA4O00483 81 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 PPP1R2P9O14990 202 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 GGCTO75223 188 aaKnown RBP7.77□□□□□ -1.17
SS18-207ENST00000577636 IGHV3-11P01762 117 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 S100PP25815 95 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 RPL35P42766 123 aaKnown RBP7.77□□□□□ -1.17
SS18-207ENST00000577636 GALR1P47211 349 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 MEOX2P50222 304 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 PSG9Q00887 426 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 CFHR3Q02985 330 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 FOXE3Q13461 319 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 PDE6HQ13956 83 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 C1orf194Q5T5A4 169 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 CBLN2Q8IUK8 224 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 C15orf54Q8N8G6 183 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 C5orf17Q8NAS9 161 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 KLHL30-AS1Q8NEE0 82 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 ANAPC16Q96DE5 110 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 OR5B12Q96R08 314 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 TUBA4BQ9H853 241 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 OTORQ9NRC9 128 aa7.77□□□□□ -1.17
SS18-207ENST00000577636 PEF1Q9UBV8 284 aaKnown RBP7.77□□□□□ -1.17
SS18-207ENST00000577636 TRBV19A0A075B6N1 114 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 IGHV3-35A0A0C4DH35 117 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 A0A1W2PS18 150 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 ZNF785A8K8V0 405 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 PPP5D1E7EU14 171 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 H7BYZ3 331 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 PEX7O00628 323 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 PSMB8P28062 276 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 BMI1P35226 326 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 MYCNOSP40205 109 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 CSN1S1P47710 185 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 TAS2R60P59551 318 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms