RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 VSIG2Q96IQ7 327 aa8.31□□□□□ -1.08
PRPF8-208ENST00000573716 MTFP1Q9UDX5 166 aa8.31□□□□□ -1.08
PRPF8-208ENST00000573716 SLC45A2Q9UMX9 530 aa8.31□□□□□ -1.08
PRPF8-208ENST00000573716 TMEM56-RWDD3S4R434 201 aa8.31□□□□□ -1.08
PRPF8-208ENST00000573716 ATP5IP56385 69 aaPredicted RBP8.3□□□□□ -1.08
PRPF8-208ENST00000573716 AKR1C1Q04828 323 aa8.3□□□□□ -1.08
PRPF8-208ENST00000573716 TMEM182Q6ZP80 229 aaPredicted RBP8.3□□□□□ -1.08
PRPF8-208ENST00000573716 TMEM229BQ8NBD8 167 aa8.3□□□□□ -1.08
PRPF8-208ENST00000573716 RPUSD4Q96CM3 377 aaKnown RBP8.3□□□□□ -1.08
PRPF8-208ENST00000573716 IGLV5-52A0A0A0MRZ9 124 aa8.29□□□□□ -1.08
PRPF8-208ENST00000573716 AKR1C4P17516 323 aa8.29□□□□□ -1.08
PRPF8-208ENST00000573716 RPL7P18124 248 aaKnown RBP8.29□□□□□ -1.08
PRPF8-208ENST00000573716 CXCL3P19876 107 aa8.29□□□□□ -1.08
PRPF8-208ENST00000573716 GFI1BQ5VTD9 330 aa8.29□□□□□ -1.08
PRPF8-208ENST00000573716 LYZL2Q7Z4W2 148 aa8.29□□□□□ -1.08
PRPF8-208ENST00000573716 EXTL2Q9UBQ6 330 aa8.29□□□□□ -1.08
PRPF8-208ENST00000573716 KCNIP3Q9Y2W7 256 aa8.29□□□□□ -1.08
PRPF8-208ENST00000573716 ICOSQ9Y6W8 199 aa8.29□□□□□ -1.08
PRPF8-208ENST00000573716 TRAV9-2A0A087WT02 112 aa8.28□□□□□ -1.08
PRPF8-208ENST00000573716 DISC1C4P0D8 188 aa8.28□□□□□ -1.08
PRPF8-208ENST00000573716 NPIPB6E9PJ23 425 aa8.28□□□□□ -1.08
PRPF8-208ENST00000573716 H3BRN7 92 aa8.28□□□□□ -1.08
PRPF8-208ENST00000573716 OR5G3P0C626 314 aa8.28□□□□□ -1.08
PRPF8-208ENST00000573716 RAP2BP61225 183 aa8.28□□□□□ -1.08
PRPF8-208ENST00000573716 NCS1P62166 190 aa8.28□□□□□ -1.08
PRPF8-208ENST00000573716 SERTAD4-AS1Q5TG53 156 aa8.28□□□□□ -1.08
PRPF8-208ENST00000573716 IL22RA2Q969J5 263 aa8.28□□□□□ -1.08
PRPF8-208ENST00000573716 YIPF6Q96EC8 236 aa8.28□□□□□ -1.08
PRPF8-208ENST00000573716 MSRB1Q9NZV6 116 aa8.28□□□□□ -1.08
PRPF8-208ENST00000573716 HIGD1AQ9Y241 93 aa8.28□□□□□ -1.08
PRPF8-208ENST00000573716 TRGV1A0A0A0MS02 117 aa8.27□□□□□ -1.09
PRPF8-208ENST00000573716 TRAV12-3A0A0B4J271 114 aa8.27□□□□□ -1.09
PRPF8-208ENST00000573716 A0A0B4J2A0 478 aa8.27□□□□□ -1.09
PRPF8-208ENST00000573716 SMCO3A2RU48 225 aa8.27□□□□□ -1.09
PRPF8-208ENST00000573716 PAX4O43316 350 aa8.27□□□□□ -1.09
PRPF8-208ENST00000573716 SNRPCP09234 159 aaKnown RBP8.27□□□□□ -1.09
PRPF8-208ENST00000573716 VBP1P61758 197 aa8.27□□□□□ -1.09
PRPF8-208ENST00000573716 SURF2Q15527 256 aaPredicted RBP8.27□□□□□ -1.09
PRPF8-208ENST00000573716 MZT2AQ6P582 158 aa8.27□□□□□ -1.09
PRPF8-208ENST00000573716 C20orf144Q9BQM9 153 aa8.27□□□□□ -1.09
PRPF8-208ENST00000573716 SHANK2-AS3Q9BTD1 123 aa8.27□□□□□ -1.09
PRPF8-208ENST00000573716 TMEM70Q9BUB7 260 aa8.27□□□□□ -1.09
PRPF8-208ENST00000573716 SHPKQ9UHJ6 478 aa8.27□□□□□ -1.09
PRPF8-208ENST00000573716 GPR132Q9UNW8 380 aa8.27□□□□□ -1.09
PRPF8-208ENST00000573716 LY96Q9Y6Y9 160 aa8.27□□□□□ -1.09
PRPF8-208ENST00000573716 KRTAP29-1A8MX34 341 aaPredicted RBP8.26□□□□□ -1.09
PRPF8-208ENST00000573716 HYPMO75409 117 aa8.26□□□□□ -1.09
PRPF8-208ENST00000573716 IGHV3-53P01767 116 aa8.26□□□□□ -1.09
PRPF8-208ENST00000573716 PLA2G1BP04054 148 aaKnown RBP8.26□□□□□ -1.09
PRPF8-208ENST00000573716 IL5P05113 134 aa8.26□□□□□ -1.09
PRPF8-208ENST00000573716 ANXA7P20073 488 aaKnown RBP8.26□□□□□ -1.09
PRPF8-208ENST00000573716 GSN-AS1Q9NRJ2 163 aa8.26□□□□□ -1.09
PRPF8-208ENST00000573716 FUT9Q9Y231 359 aa8.26□□□□□ -1.09
PRPF8-208ENST00000573716 PSCAO43653 123 aa8.25□□□□□ -1.09
PRPF8-208ENST00000573716 DAZ2Q13117 558 aaKnown RBP8.25□□□□□ -1.09
PRPF8-208ENST00000573716 CYP2G1PQ6ZSU1 146 aa8.25□□□□□ -1.09
PRPF8-208ENST00000573716 OR51S1Q8NGJ8 323 aa8.25□□□□□ -1.09
PRPF8-208ENST00000573716 LINC00467Q9BRT7 94 aa8.25□□□□□ -1.09
PRPF8-208ENST00000573716 VCX3AQ9NNX9 186 aa8.25□□□□□ -1.09
PRPF8-208ENST00000573716 PLA2G2DQ9UNK4 145 aa8.25□□□□□ -1.09
PRPF8-208ENST00000573716 A0A087X0K7 114 aa8.24□□□□□ -1.09
PRPF8-208ENST00000573716 PMS2P5A8MQ11 134 aa8.24□□□□□ -1.09
PRPF8-208ENST00000573716 PRAC2D3DTV9 90 aa8.24□□□□□ -1.09
PRPF8-208ENST00000573716 H3BP45 60 aa8.24□□□□□ -1.09
PRPF8-208ENST00000573716 H3BTX0 84 aa8.24□□□□□ -1.09
PRPF8-208ENST00000573716 WRBO00258 174 aa8.24□□□□□ -1.09
PRPF8-208ENST00000573716 LINC00869P0C866 280 aa8.24□□□□□ -1.09
PRPF8-208ENST00000573716 AKAIN1P0CW23 69 aa8.24□□□□□ -1.09
PRPF8-208ENST00000573716 EVI2AP22794 236 aa8.24□□□□□ -1.09
PRPF8-208ENST00000573716 RPP30P78346 268 aaKnown RBP8.24□□□□□ -1.09
PRPF8-208ENST00000573716 SPANXN5Q5MJ07 72 aa8.24□□□□□ -1.09
PRPF8-208ENST00000573716 LYPD5Q6UWN5 251 aa8.24□□□□□ -1.09
PRPF8-208ENST00000573716 ACOT7LQ6ZUV0 252 aa8.24□□□□□ -1.09
PRPF8-208ENST00000573716 CLVS1Q8IUQ0 354 aaPredicted RBP8.24□□□□□ -1.09
PRPF8-208ENST00000573716 C15orf40Q8WUR7 153 aa8.24□□□□□ -1.09
PRPF8-208ENST00000573716 PRRT1Q99946 306 aa8.24□□□□□ -1.09
PRPF8-208ENST00000573716 ZNF324O75467 553 aaPredicted RBP8.23□□□□□ -1.09
PRPF8-208ENST00000573716 MED6O75586 246 aa8.23□□□□□ -1.09
PRPF8-208ENST00000573716 ANXA3P12429 323 aa8.23□□□□□ -1.09
PRPF8-208ENST00000573716 LEPP41159 167 aa8.23□□□□□ -1.09
PRPF8-208ENST00000573716 SRPXP78539 464 aa8.23□□□□□ -1.09
PRPF8-208ENST00000573716 WFDC10BQ8IUB3 73 aa8.23□□□□□ -1.09
PRPF8-208ENST00000573716 DEFB104AQ8WTQ1 72 aa8.23□□□□□ -1.09
PRPF8-208ENST00000573716 AP3S1Q92572 193 aa8.23□□□□□ -1.09
PRPF8-208ENST00000573716 C8orf49Q96NF6 230 aa8.23□□□□□ -1.09
PRPF8-208ENST00000573716 PYGO2Q9BRQ0 406 aa8.23□□□□□ -1.09
PRPF8-208ENST00000573716 ARL6Q9H0F7 186 aa8.23□□□□□ -1.09
PRPF8-208ENST00000573716 FAM30AQ9NZY2 134 aa8.23□□□□□ -1.09
PRPF8-208ENST00000573716 UBR4Q5T4S7 5183 aa8.22□□□□□ -1.09
PRPF8-208ENST00000573716 LINC00854A0A1B0GVQ3 168 aa8.22□□□□□ -1.09
PRPF8-208ENST00000573716 PRSS46E5RG02 174 aa8.22□□□□□ -1.09
PRPF8-208ENST00000573716 PRAF2O60831 178 aa8.22□□□□□ -1.09
PRPF8-208ENST00000573716 MRPL23Q16540 153 aaKnown RBP8.22□□□□□ -1.09
PRPF8-208ENST00000573716 LCN15Q6UWW0 184 aa8.22□□□□□ -1.09
PRPF8-208ENST00000573716 S100A7AQ86SG5 101 aa8.22□□□□□ -1.09
PRPF8-208ENST00000573716 ZNF680Q8NEM1 530 aa8.22□□□□□ -1.09
PRPF8-208ENST00000573716 CIB3Q96Q77 187 aaPredicted RBP8.22□□□□□ -1.09
PRPF8-208ENST00000573716 ZNF331Q9NQX6 463 aaPredicted RBP8.22□□□□□ -1.09
PRPF8-208ENST00000573716 SYNGR2O43760 224 aa8.21□□□□□ -1.1
PRPF8-208ENST00000573716 PITX3O75364 302 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms