RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 SH2D1AO60880 128 aa13.04□□□□□ -0.32
CACNA1A-202ENST00000573710 FSTP19883 344 aa13.04□□□□□ -0.32
CACNA1A-202ENST00000573710 IGLV1-36A0A0B4J1U3 117 aa13.03□□□□□ -0.32
CACNA1A-202ENST00000573710 H0Y9J4 135 aa13.03□□□□□ -0.32
CACNA1A-202ENST00000573710 UPK2O00526 184 aa13.03□□□□□ -0.32
CACNA1A-202ENST00000573710 C10orf55Q5SWW7 151 aa13.03□□□□□ -0.32
CACNA1A-202ENST00000573710 SP5Q6BEB4 398 aaPredicted RBP13.03□□□□□ -0.32
CACNA1A-202ENST00000573710 OCC1Q8TAD7 63 aa13.03□□□□□ -0.32
CACNA1A-202ENST00000573710 ZNF837Q96EG3 531 aaPredicted RBP13.03□□□□□ -0.32
CACNA1A-202ENST00000573710 CNOT1A5YKK6 2376 aaKnown RBP13.03□□□□□ -0.32
CACNA1A-202ENST00000573710 MORN2Q502X0 79 aa13.03□□□□□ -0.32
CACNA1A-202ENST00000573710 BRK1Q8WUW1 75 aa13.03□□□□□ -0.32
CACNA1A-202ENST00000573710 STPG4Q8N801 248 aa13.03□□□□□ -0.32
CACNA1A-202ENST00000573710 LAMB2P55268 1798 aa13.03□□□□□ -0.32
CACNA1A-202ENST00000573710 ADAMTSL3P82987 1691 aa13.03□□□□□ -0.32
CACNA1A-202ENST00000573710 IGHV2-26A0A0B4J1V2 119 aa13.03□□□□□ -0.32
CACNA1A-202ENST00000573710 TNFSF13O75888 250 aa13.03□□□□□ -0.32
CACNA1A-202ENST00000573710 PRRC2AP48634 2157 aaKnown RBP13.03□□□□□ -0.32
CACNA1A-202ENST00000573710 RALGAPA2Q2PPJ7 1873 aa13.03□□□□□ -0.32
CACNA1A-202ENST00000573710 B4DSR2 109 aa13.02□□□□□ -0.32
CACNA1A-202ENST00000573710 EFNA2O43921 213 aa13.02□□□□□ -0.32
CACNA1A-202ENST00000573710 LINC01356Q8N9X3 169 aa13.02□□□□□ -0.32
CACNA1A-202ENST00000573710 DSCR9P59020 149 aa13.02□□□□□ -0.32
CACNA1A-202ENST00000573710 MRPS18AQ9NVS2 196 aaKnown RBP13.02□□□□□ -0.32
CACNA1A-202ENST00000573710 PCDH15Q96QU1 1955 aa13.02□□□□□ -0.33
CACNA1A-202ENST00000573710 APOC4P55056 127 aa13.02□□□□□ -0.33
CACNA1A-202ENST00000573710 DSCAMO60469 2012 aa13.02□□□□□ -0.33
CACNA1A-202ENST00000573710 GZMMP51124 257 aa13.02□□□□□ -0.33
CACNA1A-202ENST00000573710 SS18L2Q9UHA2 77 aa13.02□□□□□ -0.33
CACNA1A-202ENST00000573710 A0A1B0GWJ7 208 aa13.01□□□□□ -0.33
CACNA1A-202ENST00000573710 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.01□□□□□ -0.33
CACNA1A-202ENST00000573710 PILRAQ9UKJ1 303 aa13.01□□□□□ -0.33
CACNA1A-202ENST00000573710 FGF6P10767 208 aa13.01□□□□□ -0.33
CACNA1A-202ENST00000573710 PAPPAQ13219 1627 aa13.01□□□□□ -0.33
CACNA1A-202ENST00000573710 SHANK3Q9BYB0 1731 aa13.01□□□□□ -0.33
CACNA1A-202ENST00000573710 C5orf67F2Z3F1 127 aa13.01□□□□□ -0.33
CACNA1A-202ENST00000573710 MRPL14Q6P1L8 145 aaKnown RBP13.01□□□□□ -0.33
CACNA1A-202ENST00000573710 ZNF708P17019 499 aa13□□□□□ -0.33
CACNA1A-202ENST00000573710 FOXF2Q12947 444 aa13□□□□□ -0.33
CACNA1A-202ENST00000573710 RIPPLY2Q5TAB7 128 aa13□□□□□ -0.33
CACNA1A-202ENST00000573710 FAM104BQ5XKR9 115 aa13□□□□□ -0.33
CACNA1A-202ENST00000573710 WFDC6Q9BQY6 131 aa13□□□□□ -0.33
CACNA1A-202ENST00000573710 PSME4Q14997 1843 aa13□□□□□ -0.33
CACNA1A-202ENST00000573710 SUPT4H1P63272 117 aaKnown RBP13□□□□□ -0.33
CACNA1A-202ENST00000573710 LIME1Q9H400 295 aa13□□□□□ -0.33
CACNA1A-202ENST00000573710 SPRR3Q9UBC9 169 aa13□□□□□ -0.33
CACNA1A-202ENST00000573710 TRBV20-1A0A075B6N2 111 aa13□□□□□ -0.33
CACNA1A-202ENST00000573710 TRBV7-1A0A0A6YYK4 115 aa13□□□□□ -0.33
CACNA1A-202ENST00000573710 GREB1LQ9C091 1923 aaPredicted RBP13□□□□□ -0.33
CACNA1A-202ENST00000573710 A0A0J9YWU9 116 aa13□□□□□ -0.33
CACNA1A-202ENST00000573710 TMEM200BQ69YZ2 307 aa13□□□□□ -0.33
CACNA1A-202ENST00000573710 RMI2Q96E14 147 aa13□□□□□ -0.33
CACNA1A-202ENST00000573710 IGHV4-59P01825 116 aa13□□□□□ -0.33
CACNA1A-202ENST00000573710 CDKN1BP46527 198 aa13□□□□□ -0.33
CACNA1A-202ENST00000573710 QSER1Q2KHR3 1735 aa12.99□□□□□ -0.33
CACNA1A-202ENST00000573710 PROP1O75360 226 aa12.99□□□□□ -0.33
CACNA1A-202ENST00000573710 UBE2AP49459 152 aa12.99□□□□□ -0.33
CACNA1A-202ENST00000573710 C15orf53Q8NAA6 179 aa12.99□□□□□ -0.33
CACNA1A-202ENST00000573710 GVINP1Q7Z2Y8 2422 aa12.99□□□□□ -0.33
CACNA1A-202ENST00000573710 ZNF236Q9UL36 1845 aa12.99□□□□□ -0.33
CACNA1A-202ENST00000573710 ZNRF2Q8NHG8 242 aa12.99□□□□□ -0.33
CACNA1A-202ENST00000573710 BPESC1Q9GZL8 116 aa12.99□□□□□ -0.33
CACNA1A-202ENST00000573710 IGHV1-18A0A0C4DH31 117 aa12.99□□□□□ -0.33
CACNA1A-202ENST00000573710 COX5BP10606 129 aa12.99□□□□□ -0.33
CACNA1A-202ENST00000573710 Q0VFX4 171 aa12.99□□□□□ -0.33
CACNA1A-202ENST00000573710 USP54Q70EL1 1684 aa12.99□□□□□ -0.33
CACNA1A-202ENST00000573710 CFHR2P36980 270 aa12.99□□□□□ -0.33
CACNA1A-202ENST00000573710 C9orf47Q6ZRZ4 202 aa12.99□□□□□ -0.33
CACNA1A-202ENST00000573710 IGLV10-54A0A075B6I4 117 aa12.99□□□□□ -0.33
CACNA1A-202ENST00000573710 AMN1Q8IY45 258 aa12.99□□□□□ -0.33
CACNA1A-202ENST00000573710 TRAV26-2A0A0B4J265 109 aa12.98□□□□□ -0.33
CACNA1A-202ENST00000573710 UNQ6494/PRO21346Q6UXR6 183 aa12.98□□□□□ -0.33
CACNA1A-202ENST00000573710 NEGR1Q7Z3B1 354 aa12.98□□□□□ -0.33
CACNA1A-202ENST00000573710 EFNB3Q15768 340 aa12.98□□□□□ -0.33
CACNA1A-202ENST00000573710 COL22A1Q8NFW1 1626 aaPredicted RBP12.98□□□□□ -0.33
CACNA1A-202ENST00000573710 WIPF2Q8TF74 440 aaPredicted RBP12.98□□□□□ -0.33
CACNA1A-202ENST00000573710 PPBPP02775 128 aa12.98□□□□□ -0.33
CACNA1A-202ENST00000573710 TIRAPP58753 221 aa12.98□□□□□ -0.33
CACNA1A-202ENST00000573710 SCN10AQ9Y5Y9 1956 aa12.98□□□□□ -0.33
CACNA1A-202ENST00000573710 SRP19P09132 144 aaKnown RBP12.98□□□□□ -0.33
CACNA1A-202ENST00000573710 LY6G5BQ8NDX9 201 aa12.98□□□□□ -0.33
CACNA1A-202ENST00000573710 BOD1L2Q8IYS8 172 aa12.97□□□□□ -0.33
CACNA1A-202ENST00000573710 RHPN1-AS1Q9BWJ2 59 aa12.97□□□□□ -0.33
CACNA1A-202ENST00000573710 WNK3Q9BYP7 1800 aa12.97□□□□□ -0.33
CACNA1A-202ENST00000573710 ETDCA0A1B0GVM5 59 aa12.97□□□□□ -0.33
CACNA1A-202ENST00000573710 MLST8Q9BVC4 326 aa12.97□□□□□ -0.33
CACNA1A-202ENST00000573710 TM2D2Q9BX73 214 aa12.97□□□□□ -0.33
CACNA1A-202ENST00000573710 TP53TG1Q9Y2A0 90 aa12.97□□□□□ -0.33
CACNA1A-202ENST00000573710 IGHV1OR15-1A0A075B7D0 117 aa12.97□□□□□ -0.33
CACNA1A-202ENST00000573710 TMEM242Q9NWH2 141 aa12.97□□□□□ -0.33
CACNA1A-202ENST00000573710 TAF1LQ8IZX4 1826 aa12.97□□□□□ -0.33
CACNA1A-202ENST00000573710 TRBV5-5A0A0J9YX44 114 aa12.97□□□□□ -0.33
CACNA1A-202ENST00000573710 ATP5IP56385 69 aaPredicted RBP12.96□□□□□ -0.33
CACNA1A-202ENST00000573710 ESM1Q9NQ30 184 aa12.96□□□□□ -0.33
CACNA1A-202ENST00000573710 IGKV1D-43A0A0B4J1Z2 117 aa12.96□□□□□ -0.33
CACNA1A-202ENST00000573710 CCL20P78556 96 aa12.96□□□□□ -0.33
CACNA1A-202ENST00000573710 EFNA4P52798 201 aa12.96□□□□□ -0.33
CACNA1A-202ENST00000573710 CHCHD2Q9Y6H1 151 aaPredicted RBP12.96□□□□□ -0.33
CACNA1A-202ENST00000573710 K7EMI3 77 aa12.96□□□□□ -0.33
CACNA1A-202ENST00000573710 OVOL3O00110 214 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms