RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 SRD5A3Q9H8P0 318 aa10.81□□□□□ -0.68
NPLOC4-209ENST00000572760 RPRMQ9NS64 109 aa10.81□□□□□ -0.68
NPLOC4-209ENST00000572760 TMEM14CQ9P0S9 112 aa10.81□□□□□ -0.68
NPLOC4-209ENST00000572760 H3BTX0 84 aa10.8□□□□□ -0.68
NPLOC4-209ENST00000572760 EIF3GO75821 320 aaKnown RBP eCLIP10.8□□□□□ -0.68
NPLOC4-209ENST00000572760 IGHV4-30-4P0DP06 118 aa10.8□□□□□ -0.68
NPLOC4-209ENST00000572760 GUK1Q16774 197 aa10.8□□□□□ -0.68
NPLOC4-209ENST00000572760 STOML3Q8TAV4 291 aa10.8□□□□□ -0.68
NPLOC4-209ENST00000572760 BLNKQ8WV28 456 aa10.8□□□□□ -0.68
NPLOC4-209ENST00000572760 FAM167A-AS1Q96KT0 104 aa10.8□□□□□ -0.68
NPLOC4-209ENST00000572760 SLC50A1Q9BRV3 221 aa10.8□□□□□ -0.68
NPLOC4-209ENST00000572760 HRH4Q9H3N8 390 aa10.8□□□□□ -0.68
NPLOC4-209ENST00000572760 C19orf73Q9NVV2 129 aa10.8□□□□□ -0.68
NPLOC4-209ENST00000572760 H3BQ15 152 aa10.79□□□□□ -0.68
NPLOC4-209ENST00000572760 SOCS3O14543 225 aa10.79□□□□□ -0.68
NPLOC4-209ENST00000572760 HMGB3O15347 200 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-209ENST00000572760 OR10J4P0C629 311 aa10.79□□□□□ -0.68
NPLOC4-209ENST00000572760 IGLC2P0DOY2 106 aa10.79□□□□□ -0.68
NPLOC4-209ENST00000572760 UBE2L3P68036 154 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-209ENST00000572760 PQLC2Q6ZP29 291 aa10.79□□□□□ -0.68
NPLOC4-209ENST00000572760 RPP25LQ8N5L8 163 aaKnown RBP10.79□□□□□ -0.68
NPLOC4-209ENST00000572760 RNF141Q8WVD5 230 aa10.79□□□□□ -0.68
NPLOC4-209ENST00000572760 RAB24Q969Q5 203 aa10.79□□□□□ -0.68
NPLOC4-209ENST00000572760 C17orf77Q96MU5 243 aa10.79□□□□□ -0.68
NPLOC4-209ENST00000572760 ZNF586Q9NXT0 402 aa10.79□□□□□ -0.68
NPLOC4-209ENST00000572760 CTXND1A0A1B0GTU2 59 aa10.78□□□□□ -0.68
NPLOC4-209ENST00000572760 UMAD1C9J7I0 102 aa10.78□□□□□ -0.68
NPLOC4-209ENST00000572760 NBEAP1P0C6P0 100 aa10.78□□□□□ -0.68
NPLOC4-209ENST00000572760 ZNF124Q15973 351 aa10.78□□□□□ -0.68
NPLOC4-209ENST00000572760 IGFL4Q6B9Z1 124 aa10.78□□□□□ -0.68
NPLOC4-209ENST00000572760 TMED6Q8WW62 240 aa10.78□□□□□ -0.68
NPLOC4-209ENST00000572760 FRMD6-AS1P0C7T7 363 aa10.77□□□□□ -0.69
NPLOC4-209ENST00000572760 PSG9Q00887 426 aa10.77□□□□□ -0.69
NPLOC4-209ENST00000572760 ACTL10Q5JWF8 245 aa10.77□□□□□ -0.69
NPLOC4-209ENST00000572760 STHQ8IWL8 128 aa10.77□□□□□ -0.69
NPLOC4-209ENST00000572760 IQCF2Q8IXL9 164 aa10.77□□□□□ -0.69
NPLOC4-209ENST00000572760 RNF182Q8N6D2 247 aa10.77□□□□□ -0.69
NPLOC4-209ENST00000572760 ZNF738Q8NE65 137 aa10.77□□□□□ -0.69
NPLOC4-209ENST00000572760 ZNF331Q9NQX6 463 aaPredicted RBP10.77□□□□□ -0.69
NPLOC4-209ENST00000572760 CLEC5AQ9NY25 188 aa10.77□□□□□ -0.69
NPLOC4-209ENST00000572760 TRBV19A0A075B6N1 114 aa10.76□□□□□ -0.69
NPLOC4-209ENST00000572760 LOC102724200A0A096LPH7 203 aaPredicted RBP10.76□□□□□ -0.69
NPLOC4-209ENST00000572760 TRAV8-2A0A0B4J237 113 aa10.76□□□□□ -0.69
NPLOC4-209ENST00000572760 KNCNA6PVL3 124 aa10.76□□□□□ -0.69
NPLOC4-209ENST00000572760 A8MZ25 164 aa10.76□□□□□ -0.69
NPLOC4-209ENST00000572760 ZNF253O75346 499 aa10.76□□□□□ -0.69
NPLOC4-209ENST00000572760 CXorf1O96002 111 aa10.76□□□□□ -0.69
NPLOC4-209ENST00000572760 STAG3L2P0CL84 134 aa10.76□□□□□ -0.69
NPLOC4-209ENST00000572760 STAG3L3P0CL85 134 aa10.76□□□□□ -0.69
NPLOC4-209ENST00000572760 ARL14EPLP0DKL9 152 aa10.76□□□□□ -0.69
NPLOC4-209ENST00000572760 RPL35AP18077 110 aaKnown RBP10.76□□□□□ -0.69
NPLOC4-209ENST00000572760 PDE6HQ13956 83 aa10.76□□□□□ -0.69
NPLOC4-209ENST00000572760 PSG3Q16557 428 aa10.76□□□□□ -0.69
NPLOC4-209ENST00000572760 EBLN2Q6P2I7 272 aa10.76□□□□□ -0.69
NPLOC4-209ENST00000572760 FAM213BQ8TBF2 198 aa10.76□□□□□ -0.69
NPLOC4-209ENST00000572760 FXYD5Q96DB9 178 aa10.76□□□□□ -0.69
NPLOC4-209ENST00000572760 AAMDCQ9H7C9 122 aa10.76□□□□□ -0.69
NPLOC4-209ENST00000572760 SLC17A3O00476 420 aa10.75□□□□□ -0.69
NPLOC4-209ENST00000572760 HLA-DMBP28068 263 aa10.75□□□□□ -0.69
NPLOC4-209ENST00000572760 SAT2Q96F10 170 aaPredicted RBP10.75□□□□□ -0.69
NPLOC4-209ENST00000572760 ZNF503Q96F45 646 aa10.75□□□□□ -0.69
NPLOC4-209ENST00000572760 C20orf173Q96LM9 149 aa10.75□□□□□ -0.69
NPLOC4-209ENST00000572760 CITED4Q96RK1 184 aa10.75□□□□□ -0.69
NPLOC4-209ENST00000572760 BOLA1Q9Y3E2 137 aa10.75□□□□□ -0.69
NPLOC4-209ENST00000572760 MAP1LC3B2A6NCE7 125 aa10.74□□□□□ -0.69
NPLOC4-209ENST00000572760 BOLA2-SMG1P6H3BVE0 249 aa10.74□□□□□ -0.69
NPLOC4-209ENST00000572760 GCHFRP30047 84 aa10.74□□□□□ -0.69
NPLOC4-209ENST00000572760 RAB5CP51148 216 aa10.74□□□□□ -0.69
NPLOC4-209ENST00000572760 RANP62826 216 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-209ENST00000572760 DPPA3Q6W0C5 159 aa10.74□□□□□ -0.69
NPLOC4-209ENST00000572760 FOXI2Q6ZQN5 318 aa10.74□□□□□ -0.69
NPLOC4-209ENST00000572760 MAP1LC3BQ9GZQ8 125 aa10.74□□□□□ -0.69
NPLOC4-209ENST00000572760 TMEM167BQ9NRX6 74 aa10.74□□□□□ -0.69
NPLOC4-209ENST00000572760 PLA2G2EQ9NZK7 142 aa10.74□□□□□ -0.69
NPLOC4-209ENST00000572760 DNAH3Q8TD57 4116 aa10.73□□□□□ -0.69
NPLOC4-209ENST00000572760 RBMY1BA6NDE4 496 aaKnown RBP10.73□□□□□ -0.69
NPLOC4-209ENST00000572760 RBMY1EA6NEQ0 496 aaKnown RBP10.73□□□□□ -0.69
NPLOC4-209ENST00000572760 NDUFB4O95168 129 aa10.73□□□□□ -0.69
NPLOC4-209ENST00000572760 RBMY1DP0C7P1 496 aaKnown RBP10.73□□□□□ -0.69
NPLOC4-209ENST00000572760 APOC4P55056 127 aa10.73□□□□□ -0.69
NPLOC4-209ENST00000572760 FGF8P55075 233 aaPredicted RBP10.73□□□□□ -0.69
NPLOC4-209ENST00000572760 DEFB1P60022 68 aa10.73□□□□□ -0.69
NPLOC4-209ENST00000572760 ICAM4Q14773 271 aa10.73□□□□□ -0.69
NPLOC4-209ENST00000572760 ZNF726P1Q15940 193 aa10.73□□□□□ -0.69
NPLOC4-209ENST00000572760 SSX7Q7RTT5 188 aa10.73□□□□□ -0.69
NPLOC4-209ENST00000572760 EXOC3-AS1Q8N2X6 119 aa10.73□□□□□ -0.69
NPLOC4-209ENST00000572760 OR4B1Q8NGF8 309 aa10.73□□□□□ -0.69
NPLOC4-209ENST00000572760 RPUSD4Q96CM3 377 aaKnown RBP10.73□□□□□ -0.69
NPLOC4-209ENST00000572760 ASCL2Q99929 193 aa10.73□□□□□ -0.69
NPLOC4-209ENST00000572760 SAV1Q9H4B6 383 aaPredicted RBP10.73□□□□□ -0.69
NPLOC4-209ENST00000572760 PRELID1Q9Y255 219 aa10.73□□□□□ -0.69
NPLOC4-209ENST00000572760 F6UB75 175 aa10.72□□□□□ -0.69
NPLOC4-209ENST00000572760 DUSP14O95147 198 aaKnown RBP10.72□□□□□ -0.69
NPLOC4-209ENST00000572760 HLA-DRB4P13762 266 aa10.72□□□□□ -0.69
NPLOC4-209ENST00000572760 FHITP49789 147 aa10.72□□□□□ -0.69
NPLOC4-209ENST00000572760 FAM74A1Q5RGS3 127 aa10.72□□□□□ -0.69
NPLOC4-209ENST00000572760 LYPD1Q8N2G4 141 aa10.72□□□□□ -0.69
NPLOC4-209ENST00000572760 SFT2D1Q8WV19 159 aa10.72□□□□□ -0.69
NPLOC4-209ENST00000572760 PHYHIPLQ96FC7 376 aa10.72□□□□□ -0.69
NPLOC4-209ENST00000572760 B9D2Q9BPU9 175 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms