RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 TRBV19A0A075B6N1 114 aa12.41□□□□□ -0.42
COMMD4-215ENST00000566843 A0A0G2JLM5 398 aa12.41□□□□□ -0.42
COMMD4-215ENST00000566843 H3BUT2 72 aa12.41□□□□□ -0.42
COMMD4-215ENST00000566843 TNFRSF13BO14836 293 aaPredicted RBP12.41□□□□□ -0.42
COMMD4-215ENST00000566843 PAX8Q06710 450 aa12.41□□□□□ -0.42
COMMD4-215ENST00000566843 OR2K2Q8NGT1 345 aa12.41□□□□□ -0.42
COMMD4-215ENST00000566843 RBPJQ06330 500 aa12.41□□□□□ -0.42
COMMD4-215ENST00000566843 PSG3Q16557 428 aa12.41□□□□□ -0.42
COMMD4-215ENST00000566843 LYPD1Q8N2G4 141 aa12.41□□□□□ -0.42
COMMD4-215ENST00000566843 NGBQ9NPG2 151 aa12.41□□□□□ -0.42
COMMD4-215ENST00000566843 RIPPLY3P57055 190 aa12.4□□□□□ -0.42
COMMD4-215ENST00000566843 SIGLEC15Q6ZMC9 328 aa12.4□□□□□ -0.42
COMMD4-215ENST00000566843 NUP37Q8NFH4 326 aa12.4□□□□□ -0.42
COMMD4-215ENST00000566843 NPFFR1Q9GZQ6 430 aa12.4□□□□□ -0.42
COMMD4-215ENST00000566843 TEX22C9J3V5 150 aa12.4□□□□□ -0.42
COMMD4-215ENST00000566843 CD40P25942 277 aa12.4□□□□□ -0.42
COMMD4-215ENST00000566843 FAM104BQ5XKR9 115 aa12.4□□□□□ -0.42
COMMD4-215ENST00000566843 OR5A1Q8NGJ0 315 aa12.4□□□□□ -0.42
COMMD4-215ENST00000566843 ABHD17AQ96GS6 310 aa12.4□□□□□ -0.42
COMMD4-215ENST00000566843 D6R8Y8 96 aa12.39□□□□□ -0.43
COMMD4-215ENST00000566843 I3L2K1 104 aa12.39□□□□□ -0.43
COMMD4-215ENST00000566843 K7EQM0 130 aa12.39□□□□□ -0.43
COMMD4-215ENST00000566843 PLXNB1O43157 2135 aa12.39□□□□□ -0.43
COMMD4-215ENST00000566843 ENSAO43768 121 aaKnown RBP12.39□□□□□ -0.43
COMMD4-215ENST00000566843 CCL8P80075 99 aa12.39□□□□□ -0.43
COMMD4-215ENST00000566843 CFAP161Q6P656 301 aa12.39□□□□□ -0.43
COMMD4-215ENST00000566843 PRELID3AQ96N28 172 aa12.39□□□□□ -0.43
COMMD4-215ENST00000566843 SHANK2-AS3Q9BTD1 123 aa12.39□□□□□ -0.43
COMMD4-215ENST00000566843 THYN1Q9P016 225 aa12.39□□□□□ -0.43
COMMD4-215ENST00000566843 SIGLEC9Q9Y336 463 aa12.39□□□□□ -0.43
COMMD4-215ENST00000566843 K7EM74 188 aa12.39□□□□□ -0.43
COMMD4-215ENST00000566843 HBDP02042 147 aa12.39□□□□□ -0.43
COMMD4-215ENST00000566843 CACNG7P62955 275 aa12.39□□□□□ -0.43
COMMD4-215ENST00000566843 DEFB109BQ30KR1 87 aa12.39□□□□□ -0.43
COMMD4-215ENST00000566843 HILPDAQ9Y5L2 63 aa12.39□□□□□ -0.43
COMMD4-215ENST00000566843 INSIG2Q9Y5U4 225 aa12.39□□□□□ -0.43
COMMD4-215ENST00000566843 PPIAL4EA0A075B759 164 aa12.38□□□□□ -0.43
COMMD4-215ENST00000566843 A0A1W2PPM0 123 aa12.38□□□□□ -0.43
COMMD4-215ENST00000566843 H3BRN7 92 aa12.38□□□□□ -0.43
COMMD4-215ENST00000566843 THBDP07204 575 aa12.38□□□□□ -0.43
COMMD4-215ENST00000566843 PPIAL4FP0DN26 164 aa12.38□□□□□ -0.43
COMMD4-215ENST00000566843 ORMDL3Q8N138 153 aa12.38□□□□□ -0.43
COMMD4-215ENST00000566843 PIFOQ8TCI5 191 aa12.38□□□□□ -0.43
COMMD4-215ENST00000566843 JKAMPQ9P055 326 aa12.38□□□□□ -0.43
COMMD4-215ENST00000566843 LOC389332A0A1B0GUA5 103 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 C17orf100A8MU93 164 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 NDUFB3O43676 98 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 CNTFRP26992 372 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 TMEM155Q4W5P6 130 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 C22orf34Q6ZV56 151 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 C17orf77Q96MU5 243 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 FAM215AQ9Y5M1 114 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 IGHV3-72A0A0B4J1Y9 119 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 TMEM178BH3BS89 294 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 MRPS12O15235 138 aaKnown RBP12.37□□□□□ -0.43
COMMD4-215ENST00000566843 IGKV1-17P01599 117 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 SMIM17P0DL12 118 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 APELAP0DMC3 54 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 CT45A10P0DMU9 189 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 LOXP28300 417 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-215ENST00000566843 LYZL1Q6UWQ5 148 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 LYPD2Q6UXB3 125 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 IFI27L1Q96BM0 104 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 ZNF414Q96IQ9 312 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 RASL11BQ9BPW5 248 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 TMEM133Q9H2Q1 129 aa12.37□□□□□ -0.43
COMMD4-215ENST00000566843 ASCL2Q99929 193 aa12.36□□□□□ -0.43
COMMD4-215ENST00000566843 SERTM2A0A1B0GWG4 89 aa12.36□□□□□ -0.43
COMMD4-215ENST00000566843 TMEM213A2RRL7 107 aa12.36□□□□□ -0.43
COMMD4-215ENST00000566843 IGHV1-8P0DP01 117 aa12.36□□□□□ -0.43
COMMD4-215ENST00000566843 MRPL51Q4U2R6 128 aaKnown RBP12.36□□□□□ -0.43
COMMD4-215ENST00000566843 AMN1Q8IY45 258 aa12.36□□□□□ -0.43
COMMD4-215ENST00000566843 NAA38Q9BRA0 125 aaKnown RBP12.36□□□□□ -0.43
COMMD4-215ENST00000566843 SPTBN4Q9H254 2564 aa12.35□□□□□ -0.43
COMMD4-215ENST00000566843 ICE1Q9Y2F5 2266 aa12.35□□□□□ -0.43
COMMD4-215ENST00000566843 PSMG4Q5JS54 123 aa12.35□□□□□ -0.43
COMMD4-215ENST00000566843 TPPP3Q9BW30 176 aa12.35□□□□□ -0.43
COMMD4-215ENST00000566843 CTSZQ9UBR2 303 aa12.35□□□□□ -0.43
COMMD4-215ENST00000566843 SPCS1Q9Y6A9 102 aa12.35□□□□□ -0.43
COMMD4-215ENST00000566843 DMXL2Q8TDJ6 3036 aa12.35□□□□□ -0.43
COMMD4-215ENST00000566843 CEP295Q9C0D2 2601 aa12.35□□□□□ -0.43
COMMD4-215ENST00000566843 RBP4P02753 201 aa12.35□□□□□ -0.43
COMMD4-215ENST00000566843 COX8CQ7Z4L0 72 aa12.35□□□□□ -0.43
COMMD4-215ENST00000566843 PCP2Q8IVA1 136 aa12.35□□□□□ -0.43
COMMD4-215ENST00000566843 C8orf49Q96NF6 230 aa12.35□□□□□ -0.43
COMMD4-215ENST00000566843 PLCE1Q9P212 2302 aa12.35□□□□□ -0.43
COMMD4-215ENST00000566843 APC2O95996 2303 aa12.34□□□□□ -0.43
COMMD4-215ENST00000566843 TMEM189A5PLL7 270 aa12.34□□□□□ -0.43
COMMD4-215ENST00000566843 NDUFS7O75251 213 aa12.34□□□□□ -0.43
COMMD4-215ENST00000566843 PPP1R27Q86WC6 154 aa12.34□□□□□ -0.43
COMMD4-215ENST00000566843 FAM27E3Q08E93 113 aa12.34□□□□□ -0.43
COMMD4-215ENST00000566843 ADIPOQQ15848 244 aa12.34□□□□□ -0.43
COMMD4-215ENST00000566843 RAB37Q96AX2 223 aa12.34□□□□□ -0.43
COMMD4-215ENST00000566843 HIGD1BQ9P298 99 aa12.34□□□□□ -0.43
COMMD4-215ENST00000566843 LINC01546A6NGU7 62 aa12.33□□□□□ -0.44
COMMD4-215ENST00000566843 SHISA9B4DS77 424 aa12.33□□□□□ -0.44
COMMD4-215ENST00000566843 CLUHP3Q96NS8 147 aa12.33□□□□□ -0.44
COMMD4-215ENST00000566843 SRSF8Q9BRL6 282 aaKnown RBP12.33□□□□□ -0.44
COMMD4-215ENST00000566843 KAAG1Q9UBP8 84 aa12.33□□□□□ -0.44
COMMD4-215ENST00000566843 SH2D1AO60880 128 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms