RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.57□□□□□ -1.04
KARS-207ENST00000566560 TMED6Q8WW62 240 aa8.57□□□□□ -1.04
KARS-207ENST00000566560 TMEM14CQ9P0S9 112 aa8.57□□□□□ -1.04
KARS-207ENST00000566560 UBQLN2Q9UHD9 624 aa8.57□□□□□ -1.04
KARS-207ENST00000566560 SMAD5-AS1Q9Y6J3 95 aa8.57□□□□□ -1.04
KARS-207ENST00000566560 SOCS3O14543 225 aa8.56□□□□□ -1.04
KARS-207ENST00000566560 EIF3GO75821 320 aaKnown RBP eCLIP8.56□□□□□ -1.04
KARS-207ENST00000566560 ZNF688P0C7X2 276 aa8.56□□□□□ -1.04
KARS-207ENST00000566560 IGLC2P0DOY2 106 aa8.56□□□□□ -1.04
KARS-207ENST00000566560 PYYP10082 97 aa8.56□□□□□ -1.04
KARS-207ENST00000566560 UBE2L3P68036 154 aaKnown RBP8.56□□□□□ -1.04
KARS-207ENST00000566560 ODF3L2Q3SX64 289 aa8.56□□□□□ -1.04
KARS-207ENST00000566560 EIF5AL1Q6IS14 154 aaKnown RBP8.56□□□□□ -1.04
KARS-207ENST00000566560 LCN15Q6UWW0 184 aa8.56□□□□□ -1.04
KARS-207ENST00000566560 RPP25LQ8N5L8 163 aaKnown RBP8.56□□□□□ -1.04
KARS-207ENST00000566560 FAM24BQ8N5W8 94 aa8.56□□□□□ -1.04
KARS-207ENST00000566560 FAM167A-AS1Q96KT0 104 aa8.56□□□□□ -1.04
KARS-207ENST00000566560 ACTR3CQ9C0K3 210 aaPredicted RBP8.56□□□□□ -1.04
KARS-207ENST00000566560 WFDC10AQ9H1F0 79 aa8.56□□□□□ -1.04
KARS-207ENST00000566560 MAP6D1Q9H9H5 199 aa8.56□□□□□ -1.04
KARS-207ENST00000566560 RPRMQ9NS64 109 aa8.56□□□□□ -1.04
KARS-207ENST00000566560 OR11H12B2RN74 326 aa8.55□□□□□ -1.04
KARS-207ENST00000566560 H3BTX0 84 aa8.55□□□□□ -1.04
KARS-207ENST00000566560 HMGB3O15347 200 aaKnown RBP8.55□□□□□ -1.04
KARS-207ENST00000566560 SNRPCP09234 159 aaKnown RBP8.55□□□□□ -1.04
KARS-207ENST00000566560 OR10J4P0C629 311 aa8.55□□□□□ -1.04
KARS-207ENST00000566560 ID1P41134 155 aa8.55□□□□□ -1.04
KARS-207ENST00000566560 PSMB3P49720 205 aa8.55□□□□□ -1.04
KARS-207ENST00000566560 SNRPD3P62318 126 aaKnown RBP8.55□□□□□ -1.04
KARS-207ENST00000566560 PSMG4Q5JS54 123 aa8.55□□□□□ -1.04
KARS-207ENST00000566560 LRRC20Q8TCA0 184 aa8.55□□□□□ -1.04
KARS-207ENST00000566560 C16orf92Q96LL3 132 aa8.55□□□□□ -1.04
KARS-207ENST00000566560 C17orf77Q96MU5 243 aa8.55□□□□□ -1.04
KARS-207ENST00000566560 PAXXQ9BUH6 204 aa8.55□□□□□ -1.04
KARS-207ENST00000566560 OR51M1Q9H341 326 aa8.55□□□□□ -1.04
KARS-207ENST00000566560 HRH4Q9H3N8 390 aa8.55□□□□□ -1.04
KARS-207ENST00000566560 CTXND1A0A1B0GTU2 59 aa8.54□□□□□ -1.04
KARS-207ENST00000566560 UMAD1C9J7I0 102 aa8.54□□□□□ -1.04
KARS-207ENST00000566560 H3BQ15 152 aa8.54□□□□□ -1.04
KARS-207ENST00000566560 K7EIL1 84 aa8.54□□□□□ -1.04
KARS-207ENST00000566560 SLC17A3O00476 420 aa8.54□□□□□ -1.04
KARS-207ENST00000566560 ISLRO14498 428 aa8.54□□□□□ -1.04
KARS-207ENST00000566560 ARL14EPLP0DKL9 152 aa8.54□□□□□ -1.04
KARS-207ENST00000566560 HIST1H1EP10412 219 aaKnown RBP8.54□□□□□ -1.04
KARS-207ENST00000566560 DEFB131AP59861 70 aa8.54□□□□□ -1.04
KARS-207ENST00000566560 DEFA6Q01524 100 aa8.54□□□□□ -1.04
KARS-207ENST00000566560 GUK1Q16774 197 aa8.54□□□□□ -1.04
KARS-207ENST00000566560 PQLC2Q6ZP29 291 aa8.54□□□□□ -1.04
KARS-207ENST00000566560 SSX7Q7RTT5 188 aa8.54□□□□□ -1.04
KARS-207ENST00000566560 RAB24Q969Q5 203 aa8.54□□□□□ -1.04
KARS-207ENST00000566560 FAM110AQ9BQ89 295 aa8.54□□□□□ -1.04
KARS-207ENST00000566560 SLC50A1Q9BRV3 221 aa8.54□□□□□ -1.04
KARS-207ENST00000566560 C19orf73Q9NVV2 129 aa8.54□□□□□ -1.04
KARS-207ENST00000566560 ZNF586Q9NXT0 402 aa8.54□□□□□ -1.04
KARS-207ENST00000566560 DNAH3Q8TD57 4116 aa8.54□□□□□ -1.04
KARS-207ENST00000566560 STAG3L2P0CL84 134 aa8.53□□□□□ -1.04
KARS-207ENST00000566560 STAG3L3P0CL85 134 aa8.53□□□□□ -1.04
KARS-207ENST00000566560 CMC4P56277 68 aaPredicted RBP8.53□□□□□ -1.04
KARS-207ENST00000566560 PDE6HQ13956 83 aa8.53□□□□□ -1.04
KARS-207ENST00000566560 ZNF726P1Q15940 193 aa8.53□□□□□ -1.04
KARS-207ENST00000566560 DPPA3Q6W0C5 159 aa8.53□□□□□ -1.04
KARS-207ENST00000566560 Q8N1Y9 231 aa8.53□□□□□ -1.04
KARS-207ENST00000566560 DEFB125Q8N687 156 aa8.53□□□□□ -1.04
KARS-207ENST00000566560 FAM213BQ8TBF2 198 aa8.53□□□□□ -1.04
KARS-207ENST00000566560 MRAPQ8TCY5 172 aa8.53□□□□□ -1.04
KARS-207ENST00000566560 BLNKQ8WV28 456 aa8.53□□□□□ -1.04
KARS-207ENST00000566560 FXYD5Q96DB9 178 aa8.53□□□□□ -1.04
KARS-207ENST00000566560 ZNF503Q96F45 646 aa8.53□□□□□ -1.04
KARS-207ENST00000566560 LINC00052Q96N35 136 aa8.53□□□□□ -1.04
KARS-207ENST00000566560 SRD5A3Q9H8P0 318 aa8.53□□□□□ -1.04
KARS-207ENST00000566560 FBN3Q75N90 2809 aa8.52□□□□□ -1.05
KARS-207ENST00000566560 TRBV19A0A075B6N1 114 aa8.52□□□□□ -1.05
KARS-207ENST00000566560 TRAV8-2A0A0B4J237 113 aa8.52□□□□□ -1.05
KARS-207ENST00000566560 MAP1LC3B2A6NCE7 125 aa8.52□□□□□ -1.05
KARS-207ENST00000566560 ZNF253O75346 499 aa8.52□□□□□ -1.05
KARS-207ENST00000566560 IGHV4-30-4P0DP06 118 aa8.52□□□□□ -1.05
KARS-207ENST00000566560 FHITP49789 147 aa8.52□□□□□ -1.05
KARS-207ENST00000566560 ZNF124Q15973 351 aa8.52□□□□□ -1.05
KARS-207ENST00000566560 APRG1Q8IVJ8 170 aa8.52□□□□□ -1.05
KARS-207ENST00000566560 IQCF2Q8IXL9 164 aa8.52□□□□□ -1.05
KARS-207ENST00000566560 RNF182Q8N6D2 247 aa8.52□□□□□ -1.05
KARS-207ENST00000566560 PHYHIPLQ96FC7 376 aa8.52□□□□□ -1.05
KARS-207ENST00000566560 C20orf173Q96LM9 149 aa8.52□□□□□ -1.05
KARS-207ENST00000566560 MAP1LC3BQ9GZQ8 125 aa8.52□□□□□ -1.05
KARS-207ENST00000566560 ZNF331Q9NQX6 463 aaPredicted RBP8.52□□□□□ -1.05
KARS-207ENST00000566560 CXorf1O96002 111 aa8.51□□□□□ -1.05
KARS-207ENST00000566560 NBEAP1P0C6P0 100 aa8.51□□□□□ -1.05
KARS-207ENST00000566560 GCHFRP30047 84 aa8.51□□□□□ -1.05
KARS-207ENST00000566560 RAB5CP51148 216 aa8.51□□□□□ -1.05
KARS-207ENST00000566560 FGF8P55075 233 aaPredicted RBP8.51□□□□□ -1.05
KARS-207ENST00000566560 FAM74A1Q5RGS3 127 aa8.51□□□□□ -1.05
KARS-207ENST00000566560 IGFL4Q6B9Z1 124 aa8.51□□□□□ -1.05
KARS-207ENST00000566560 ALKAL2Q6UX46 152 aa8.51□□□□□ -1.05
KARS-207ENST00000566560 ZNF738Q8NE65 137 aa8.51□□□□□ -1.05
KARS-207ENST00000566560 SAT2Q96F10 170 aaPredicted RBP8.51□□□□□ -1.05
KARS-207ENST00000566560 AAMDCQ9H7C9 122 aa8.51□□□□□ -1.05
KARS-207ENST00000566560 TUBA4BQ9H853 241 aa8.51□□□□□ -1.05
KARS-207ENST00000566560 NDUFB4O95168 129 aa8.5□□□□□ -1.05
KARS-207ENST00000566560 HLA-DMBP28068 263 aa8.5□□□□□ -1.05
KARS-207ENST00000566560 SULT1A2P50226 295 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms