RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 LGALS9BQ3B8N2 356 aa9.61□□□□□ -0.87
COMMD4-214ENST00000566230 TMEM41BQ5BJD5 291 aa9.61□□□□□ -0.87
COMMD4-214ENST00000566230 SAMD13Q5VXD3 122 aa9.61□□□□□ -0.87
COMMD4-214ENST00000566230 ZNF575Q86XF7 245 aa9.61□□□□□ -0.87
COMMD4-214ENST00000566230 ASB13Q8WXK3 278 aa9.61□□□□□ -0.87
COMMD4-214ENST00000566230 SLC25A39Q9BZJ4 359 aaPredicted RBP9.61□□□□□ -0.87
COMMD4-214ENST00000566230 ARL6Q9H0F7 186 aa9.61□□□□□ -0.87
COMMD4-214ENST00000566230 CXCL3P19876 107 aa9.6□□□□□ -0.87
COMMD4-214ENST00000566230 GALR1P47211 349 aa9.6□□□□□ -0.87
COMMD4-214ENST00000566230 RPL29P47914 159 aaKnown RBP9.6□□□□□ -0.87
COMMD4-214ENST00000566230 MEOX2P50222 304 aa9.6□□□□□ -0.87
COMMD4-214ENST00000566230 OR5C1Q8NGR4 320 aa9.6□□□□□ -0.87
COMMD4-214ENST00000566230 THAP6Q8TBB0 222 aa9.6□□□□□ -0.87
COMMD4-214ENST00000566230 MGST2Q99735 147 aa9.6□□□□□ -0.87
COMMD4-214ENST00000566230 SHANK2-AS3Q9BTD1 123 aa9.6□□□□□ -0.87
COMMD4-214ENST00000566230 DNAJC4Q9NNZ3 241 aa9.6□□□□□ -0.87
COMMD4-214ENST00000566230 NACAE9PAV3 2078 aa9.6□□□□□ -0.87
COMMD4-214ENST00000566230 ZNF688P0C7X2 276 aa9.59□□□□□ -0.87
COMMD4-214ENST00000566230 FGL1Q08830 312 aa9.59□□□□□ -0.87
COMMD4-214ENST00000566230 FCN2Q15485 313 aa9.59□□□□□ -0.87
COMMD4-214ENST00000566230 PATE2Q6UY27 113 aa9.59□□□□□ -0.87
COMMD4-214ENST00000566230 Q6ZR54 194 aa9.59□□□□□ -0.87
COMMD4-214ENST00000566230 NDUFAF3Q9BU61 184 aa9.59□□□□□ -0.87
COMMD4-214ENST00000566230 ARV1Q9H2C2 271 aa9.59□□□□□ -0.87
COMMD4-214ENST00000566230 SLC25A22Q9H936 323 aa9.59□□□□□ -0.87
COMMD4-214ENST00000566230 H3BRN7 92 aa9.58□□□□□ -0.88
COMMD4-214ENST00000566230 RPL7P18124 248 aaKnown RBP9.58□□□□□ -0.88
COMMD4-214ENST00000566230 RPL12P30050 165 aaKnown RBP9.58□□□□□ -0.88
COMMD4-214ENST00000566230 ACTL10Q5JWF8 245 aa9.58□□□□□ -0.88
COMMD4-214ENST00000566230 OR11H7Q8NGC8 314 aa9.58□□□□□ -0.88
COMMD4-214ENST00000566230 OR1L4Q8NGR5 311 aa9.58□□□□□ -0.88
COMMD4-214ENST00000566230 RSG1Q9BU20 258 aa9.58□□□□□ -0.88
COMMD4-214ENST00000566230 DOK5Q9P104 306 aa9.58□□□□□ -0.88
COMMD4-214ENST00000566230 IGLV2-18A0A075B6J9 118 aa9.57□□□□□ -0.88
COMMD4-214ENST00000566230 ISLRO14498 428 aa9.57□□□□□ -0.88
COMMD4-214ENST00000566230 COX7A2P2O60397 106 aa9.57□□□□□ -0.88
COMMD4-214ENST00000566230 FGF7P21781 194 aa9.57□□□□□ -0.88
COMMD4-214ENST00000566230 PSMB3P49720 205 aa9.57□□□□□ -0.88
COMMD4-214ENST00000566230 OPCMLQ14982 345 aa9.57□□□□□ -0.88
COMMD4-214ENST00000566230 C10orf113Q5VZT2 155 aa9.57□□□□□ -0.88
COMMD4-214ENST00000566230 LINC00305Q7Z4B0 112 aa9.57□□□□□ -0.88
COMMD4-214ENST00000566230 TMEM37Q8WXS4 190 aa9.57□□□□□ -0.88
COMMD4-214ENST00000566230 PFDN5Q99471 154 aa9.57□□□□□ -0.88
COMMD4-214ENST00000566230 SLC25A32Q9H2D1 315 aa9.57□□□□□ -0.88
COMMD4-214ENST00000566230 SLC39A9Q9NUM3 307 aa9.57□□□□□ -0.88
COMMD4-214ENST00000566230 HSPB11Q9Y547 144 aa9.57□□□□□ -0.88
COMMD4-214ENST00000566230 UBE2L5PA0A1B0GUS4 154 aa9.56□□□□□ -0.88
COMMD4-214ENST00000566230 GIPP09681 153 aaPredicted RBP9.56□□□□□ -0.88
COMMD4-214ENST00000566230 B2MP61769 119 aa9.56□□□□□ -0.88
COMMD4-214ENST00000566230 PSMG4Q5JS54 123 aa9.56□□□□□ -0.88
COMMD4-214ENST00000566230 SPATA31B1PQ5VZV4 182 aa9.56□□□□□ -0.88
COMMD4-214ENST00000566230 MIC13Q5XKP0 118 aa9.56□□□□□ -0.88
COMMD4-214ENST00000566230 ZNF709Q8N972 641 aa9.56□□□□□ -0.88
COMMD4-214ENST00000566230 UHRF2Q96PU4 802 aa9.56□□□□□ -0.88
COMMD4-214ENST00000566230 MBD2Q9UBB5 411 aa9.56□□□□□ -0.88
COMMD4-214ENST00000566230 C17orf112F2Z3M2 114 aa9.55□□□□□ -0.88
COMMD4-214ENST00000566230 SOCS3O14543 225 aa9.55□□□□□ -0.88
COMMD4-214ENST00000566230 IFNA5P01569 189 aa9.55□□□□□ -0.88
COMMD4-214ENST00000566230 BPIFA4PQ86YQ2 179 aa9.55□□□□□ -0.88
COMMD4-214ENST00000566230 SCGB1C1Q8TD33 95 aa9.55□□□□□ -0.88
COMMD4-214ENST00000566230 C16orf92Q96LL3 132 aa9.55□□□□□ -0.88
COMMD4-214ENST00000566230 LINC00052Q96N35 136 aa9.55□□□□□ -0.88
COMMD4-214ENST00000566230 ATP5SQ99766 215 aa9.55□□□□□ -0.88
COMMD4-214ENST00000566230 NPCDR1Q9BY65 106 aa9.55□□□□□ -0.88
COMMD4-214ENST00000566230 WDR61Q9GZS3 305 aaKnown RBP9.55□□□□□ -0.88
COMMD4-214ENST00000566230 KCNIP2Q9NS61 270 aa9.55□□□□□ -0.88
COMMD4-214ENST00000566230 XCL2Q9UBD3 114 aa9.55□□□□□ -0.88
COMMD4-214ENST00000566230 PXMP4Q9Y6I8 212 aa9.55□□□□□ -0.88
COMMD4-214ENST00000566230 A0A087X0K7 114 aa9.54□□□□□ -0.88
COMMD4-214ENST00000566230 NUTF2P61970 127 aaKnown RBP9.54□□□□□ -0.88
COMMD4-214ENST00000566230 CLINT1Q14677 625 aa9.54□□□□□ -0.88
COMMD4-214ENST00000566230 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.54□□□□□ -0.88
COMMD4-214ENST00000566230 C17orf77Q96MU5 243 aa9.54□□□□□ -0.88
COMMD4-214ENST00000566230 CLUHP3Q96NS8 147 aa9.54□□□□□ -0.88
COMMD4-214ENST00000566230 RPRMQ9NS64 109 aa9.54□□□□□ -0.88
COMMD4-214ENST00000566230 PLA2G2EQ9NZK7 142 aa9.54□□□□□ -0.88
COMMD4-214ENST00000566230 LRP1BQ9NZR2 4599 aa9.54□□□□□ -0.88
COMMD4-214ENST00000566230 H3BMM0 161 aa9.53□□□□□ -0.88
COMMD4-214ENST00000566230 FOXI2Q6ZQN5 318 aa9.53□□□□□ -0.88
COMMD4-214ENST00000566230 LRRC20Q8TCA0 184 aa9.53□□□□□ -0.88
COMMD4-214ENST00000566230 PARD6GQ9BYG4 376 aaPredicted RBP9.53□□□□□ -0.88
COMMD4-214ENST00000566230 MRPS12O15235 138 aaKnown RBP9.52□□□□□ -0.89
COMMD4-214ENST00000566230 CXCL2P19875 107 aa9.52□□□□□ -0.89
COMMD4-214ENST00000566230 GUK1Q16774 197 aa9.52□□□□□ -0.89
COMMD4-214ENST00000566230 EBLN2Q6P2I7 272 aa9.52□□□□□ -0.89
COMMD4-214ENST00000566230 UBE2DNLQ8IWF7 75 aa9.52□□□□□ -0.89
COMMD4-214ENST00000566230 INO80EQ8NBZ0 244 aaPredicted RBP9.52□□□□□ -0.89
COMMD4-214ENST00000566230 AQP10Q96PS8 301 aa9.52□□□□□ -0.89
COMMD4-214ENST00000566230 C1QTNF4Q9BXJ3 329 aa9.52□□□□□ -0.89
COMMD4-214ENST00000566230 SAV1Q9H4B6 383 aaPredicted RBP9.52□□□□□ -0.89
COMMD4-214ENST00000566230 HLA-DRB4P13762 266 aa9.51□□□□□ -0.89
COMMD4-214ENST00000566230 Q5BKY6 102 aa9.51□□□□□ -0.89
COMMD4-214ENST00000566230 ZNF705AQ6ZN79 300 aaPredicted RBP9.51□□□□□ -0.89
COMMD4-214ENST00000566230 OR2T35Q8NGX2 323 aa9.51□□□□□ -0.89
COMMD4-214ENST00000566230 NEU1Q99519 415 aa9.51□□□□□ -0.89
COMMD4-214ENST00000566230 SMIM3Q9BZL3 60 aa9.51□□□□□ -0.89
COMMD4-214ENST00000566230 HLA-DRB4X5D2U9 266 aa9.51□□□□□ -0.89
COMMD4-214ENST00000566230 APOBP04114 4563 aaKnown RBP9.51□□□□□ -0.89
COMMD4-214ENST00000566230 TRAV8-2A0A0B4J237 113 aa9.5□□□□□ -0.89
COMMD4-214ENST00000566230 ZNF705FA8MVS1 300 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms