RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 TAGLN2P37802 199 aaKnown RBP7.71□□□□□ -1.17
SMG1-208ENST00000563448 SIGLEC15Q6ZMC9 328 aa7.71□□□□□ -1.17
SMG1-208ENST00000563448 ADAMTSL5Q6ZMM2 481 aa7.71□□□□□ -1.17
SMG1-208ENST00000563448 SELENOKQ9Y6D0 94 aa7.71□□□□□ -1.17
SMG1-208ENST00000563448 A0A087X0K7 114 aa7.71□□□□□ -1.18
SMG1-208ENST00000563448 GGTLC3B5MD39 225 aa7.71□□□□□ -1.18
SMG1-208ENST00000563448 SLC17A3O00476 420 aa7.71□□□□□ -1.18
SMG1-208ENST00000563448 TSPAN4O14817 238 aa7.71□□□□□ -1.18
SMG1-208ENST00000563448 CBLN1P23435 193 aa7.71□□□□□ -1.18
SMG1-208ENST00000563448 MYCNOSP40205 109 aa7.71□□□□□ -1.18
SMG1-208ENST00000563448 RANP62826 216 aaKnown RBP7.71□□□□□ -1.18
SMG1-208ENST00000563448 OR9G4Q8NGQ1 327 aa7.71□□□□□ -1.18
SMG1-208ENST00000563448 GRAMD2BQ96HH9 432 aa7.71□□□□□ -1.18
SMG1-208ENST00000563448 SMDT1Q9H4I9 107 aa7.71□□□□□ -1.18
SMG1-208ENST00000563448 ZNF785A8K8V0 405 aa7.7□□□□□ -1.18
SMG1-208ENST00000563448 CSN3P07498 182 aa7.7□□□□□ -1.18
SMG1-208ENST00000563448 GALR1P47211 349 aa7.7□□□□□ -1.18
SMG1-208ENST00000563448 SUMO1P63165 101 aaKnown RBP7.7□□□□□ -1.18
SMG1-208ENST00000563448 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.7□□□□□ -1.18
SMG1-208ENST00000563448 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.7□□□□□ -1.18
SMG1-208ENST00000563448 TXNDC17Q9BRA2 123 aa7.7□□□□□ -1.18
SMG1-208ENST00000563448 ELOVL1Q9BW60 279 aa7.7□□□□□ -1.18
SMG1-208ENST00000563448 Q9H3A6 140 aa7.7□□□□□ -1.18
SMG1-208ENST00000563448 TMEM218A2RU14 115 aa7.69□□□□□ -1.18
SMG1-208ENST00000563448 FOLR2P14207 255 aa7.69□□□□□ -1.18
SMG1-208ENST00000563448 S100A12P80511 92 aa7.69□□□□□ -1.18
SMG1-208ENST00000563448 EXOC3-AS1Q8N2X6 119 aa7.69□□□□□ -1.18
SMG1-208ENST00000563448 LINC00052Q96N35 136 aa7.69□□□□□ -1.18
SMG1-208ENST00000563448 SLC35B3Q9H1N7 401 aa7.69□□□□□ -1.18
SMG1-208ENST00000563448 PEMTQ9UBM1 199 aa7.69□□□□□ -1.18
SMG1-208ENST00000563448 ZMAT5Q9UDW3 170 aaKnown RBP7.69□□□□□ -1.18
SMG1-208ENST00000563448 PGPA6NDG6 321 aa7.69□□□□□ -1.18
SMG1-208ENST00000563448 OVOL1O14753 267 aa7.69□□□□□ -1.18
SMG1-208ENST00000563448 NDUFS6O75380 124 aaKnown RBP7.69□□□□□ -1.18
SMG1-208ENST00000563448 SCO1O75880 301 aa7.69□□□□□ -1.18
SMG1-208ENST00000563448 SFTA3P0C7M3 94 aa7.69□□□□□ -1.18
SMG1-208ENST00000563448 ADCYAP1P18509 176 aa7.69□□□□□ -1.18
SMG1-208ENST00000563448 FLI1Q01543 452 aaPredicted RBP7.69□□□□□ -1.18
SMG1-208ENST00000563448 PDE6HQ13956 83 aa7.69□□□□□ -1.18
SMG1-208ENST00000563448 FAM90A2PQ658T7 463 aa7.69□□□□□ -1.18
SMG1-208ENST00000563448 CYB561D1Q8N8Q1 229 aa7.69□□□□□ -1.18
SMG1-208ENST00000563448 MLXQ9UH92 298 aa7.69□□□□□ -1.18
SMG1-208ENST00000563448 TCF24Q7RTU0 167 aa7.68□□□□□ -1.18
SMG1-208ENST00000563448 NKX6-2Q9C056 277 aaPredicted RBP7.68□□□□□ -1.18
SMG1-208ENST00000563448 SCO2A0A1W2PP80 73 aa7.68□□□□□ -1.18
SMG1-208ENST00000563448 HELTA6NFD8 242 aa7.68□□□□□ -1.18
SMG1-208ENST00000563448 F6UZH7 168 aa7.68□□□□□ -1.18
SMG1-208ENST00000563448 PDE6DO43924 150 aa7.68□□□□□ -1.18
SMG1-208ENST00000563448 ZNF253O75346 499 aa7.68□□□□□ -1.18
SMG1-208ENST00000563448 HLA-DMBP28068 263 aa7.68□□□□□ -1.18
SMG1-208ENST00000563448 BMI1P35226 326 aa7.68□□□□□ -1.18
SMG1-208ENST00000563448 CEBPGP53567 150 aa7.68□□□□□ -1.18
SMG1-208ENST00000563448 PSG9Q00887 426 aa7.68□□□□□ -1.18
SMG1-208ENST00000563448 IGFL4Q6B9Z1 124 aa7.68□□□□□ -1.18
SMG1-208ENST00000563448 LYPD1Q8N2G4 141 aa7.68□□□□□ -1.18
SMG1-208ENST00000563448 ZNF331Q9NQX6 463 aaPredicted RBP7.68□□□□□ -1.18
SMG1-208ENST00000563448 OTORQ9NRC9 128 aa7.68□□□□□ -1.18
SMG1-208ENST00000563448 IGKV3-7A0A075B6H7 116 aa7.67□□□□□ -1.18
SMG1-208ENST00000563448 TRAV8-2A0A0B4J237 113 aa7.67□□□□□ -1.18
SMG1-208ENST00000563448 TMEM250H0YL14 139 aa7.67□□□□□ -1.18
SMG1-208ENST00000563448 M0QZ24 198 aa7.67□□□□□ -1.18
SMG1-208ENST00000563448 SLC25A5P05141 298 aaKnown RBP7.67□□□□□ -1.18
SMG1-208ENST00000563448 GNG5P63218 68 aa7.67□□□□□ -1.18
SMG1-208ENST00000563448 BTN1A1Q13410 526 aa7.67□□□□□ -1.18
SMG1-208ENST00000563448 F8W036 122 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 SOCS3O14543 225 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 PRB4P10163 310 aaPredicted RBP7.66□□□□□ -1.18
SMG1-208ENST00000563448 MEOX2P50222 304 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 RPL11P62913 178 aaKnown RBP7.66□□□□□ -1.18
SMG1-208ENST00000563448 C10orf91Q5T1B1 145 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 LINC00518Q8N0U6 118 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 C11orf52Q96A22 123 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 SLC50A1Q9BRV3 221 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 ZNF747Q9BV97 191 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 NRN1Q9NPD7 142 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 EPDR1Q9UM22 224 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 TENM1Q9UKZ4 2725 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 M0R3E3 92 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 PF4P02776 101 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 LINC00482Q8N8I6 264 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 C5orf17Q8NAS9 161 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 TMEM158Q8WZ71 300 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 RPUSD4Q96CM3 377 aaKnown RBP7.66□□□□□ -1.18
SMG1-208ENST00000563448 DERL1Q9BUN8 251 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 SEC11CQ9BY50 192 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 PARLQ9H300 379 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 AAMDCQ9H7C9 122 aa7.66□□□□□ -1.18
SMG1-208ENST00000563448 ATRQ13535 2644 aa7.65□□□□□ -1.18
SMG1-208ENST00000563448 DEFB114Q30KQ6 69 aa7.65□□□□□ -1.18
SMG1-208ENST00000563448 SOHLH1Q5JUK2 328 aa7.65□□□□□ -1.18
SMG1-208ENST00000563448 GBGT1Q8N5D6 347 aa7.65□□□□□ -1.18
SMG1-208ENST00000563448 RNF182Q8N6D2 247 aa7.65□□□□□ -1.18
SMG1-208ENST00000563448 CLRN3Q8NCR9 226 aa7.65□□□□□ -1.18
SMG1-208ENST00000563448 C2CD4CQ8TF44 421 aa7.65□□□□□ -1.18
SMG1-208ENST00000563448 DCANP1Q8TF63 244 aa7.65□□□□□ -1.18
SMG1-208ENST00000563448 C16orf92Q96LL3 132 aa7.65□□□□□ -1.18
SMG1-208ENST00000563448 MS4A6AQ9H2W1 248 aa7.65□□□□□ -1.18
SMG1-208ENST00000563448 SIGLEC8Q9NYZ4 499 aa7.65□□□□□ -1.18
SMG1-208ENST00000563448 RPH3ALQ9UNE2 315 aa7.65□□□□□ -1.18
SMG1-208ENST00000563448 ZNF705FA8MVS1 300 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms