RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 CR1P17927 2039 aa14.8□□□□□ -0.04
SMPD3-203ENST00000563226 GRIFINA4D1Z8 144 aa14.8□□□□□ -0.04
SMPD3-203ENST00000563226 C19orf71A6NCJ1 209 aa14.8□□□□□ -0.04
SMPD3-203ENST00000563226 DIRC3C9JPN6 131 aa14.8□□□□□ -0.04
SMPD3-203ENST00000563226 RPL7P18124 248 aaKnown RBP14.8□□□□□ -0.04
SMPD3-203ENST00000563226 GATA3P23771 443 aa14.8□□□□□ -0.04
SMPD3-203ENST00000563226 PDE6HQ13956 83 aa14.8□□□□□ -0.04
SMPD3-203ENST00000563226 TMEM136Q6ZRR5 245 aa14.8□□□□□ -0.04
SMPD3-203ENST00000563226 NIT2Q9NQR4 276 aa14.8□□□□□ -0.04
SMPD3-203ENST00000563226 CLPSL1A2RUU4 121 aa14.79□□□□□ -0.04
SMPD3-203ENST00000563226 ZNF785A8K8V0 405 aa14.79□□□□□ -0.04
SMPD3-203ENST00000563226 AMBPP02760 352 aa14.79□□□□□ -0.04
SMPD3-203ENST00000563226 ATP5G2Q06055 141 aa14.79□□□□□ -0.04
SMPD3-203ENST00000563226 CDPF1Q6NVV7 123 aa14.79□□□□□ -0.04
SMPD3-203ENST00000563226 TMEM75Q8N9X5 138 aa14.79□□□□□ -0.04
SMPD3-203ENST00000563226 NUP35Q8NFH5 326 aa14.79□□□□□ -0.04
SMPD3-203ENST00000563226 NEU1Q99519 415 aa14.79□□□□□ -0.04
SMPD3-203ENST00000563226 GNB1LQ9BYB4 327 aa14.79□□□□□ -0.04
SMPD3-203ENST00000563226 ABCA12Q86UK0 2595 aa14.79□□□□□ -0.04
SMPD3-203ENST00000563226 TRBV7-1A0A0A6YYK4 115 aa14.78□□□□□ -0.04
SMPD3-203ENST00000563226 RNF223E7ERA6 249 aa14.78□□□□□ -0.04
SMPD3-203ENST00000563226 IGHG2P01859 326 aa14.78□□□□□ -0.04
SMPD3-203ENST00000563226 IGF1P05019 195 aa14.78□□□□□ -0.04
SMPD3-203ENST00000563226 TSKUQ8WUA8 353 aa14.78□□□□□ -0.04
SMPD3-203ENST00000563226 PACRGQ96M98 296 aaPredicted RBP14.78□□□□□ -0.04
SMPD3-203ENST00000563226 PRSS22Q9GZN4 317 aa14.78□□□□□ -0.04
SMPD3-203ENST00000563226 ZNF492Q9P255 531 aa14.78□□□□□ -0.04
SMPD3-203ENST00000563226 TRGV3P03979 118 aa14.78□□□□□ -0.04
SMPD3-203ENST00000563226 IGFL4Q6B9Z1 124 aa14.78□□□□□ -0.04
SMPD3-203ENST00000563226 TMEM256Q8N2U0 113 aa14.78□□□□□ -0.04
SMPD3-203ENST00000563226 RPP21Q9H633 154 aaKnown RBP14.78□□□□□ -0.04
SMPD3-203ENST00000563226 NBPF19A0A087WUL8 3843 aa14.77□□□□□ -0.04
SMPD3-203ENST00000563226 IGHV3-66A0A0C4DH42 116 aa14.77□□□□□ -0.04
SMPD3-203ENST00000563226 TRBV6-1A0A0K0K1D8 114 aa14.77□□□□□ -0.04
SMPD3-203ENST00000563226 TGFAP01135 160 aa14.77□□□□□ -0.04
SMPD3-203ENST00000563226 PSG3Q16557 428 aa14.77□□□□□ -0.04
SMPD3-203ENST00000563226 AAMDCQ9H7C9 122 aa14.77□□□□□ -0.04
SMPD3-203ENST00000563226 NAT8BQ9UHF3 227 aa14.77□□□□□ -0.04
SMPD3-203ENST00000563226 PSG8Q9UQ74 426 aa14.77□□□□□ -0.04
SMPD3-203ENST00000563226 HIGD1CA8MV81 97 aa14.77□□□□□ -0.05
SMPD3-203ENST00000563226 NUPR1O60356 82 aa14.77□□□□□ -0.05
SMPD3-203ENST00000563226 HLA-DMBP28068 263 aa14.77□□□□□ -0.05
SMPD3-203ENST00000563226 TCF24Q7RTU0 167 aa14.77□□□□□ -0.05
SMPD3-203ENST00000563226 TP53TG3Q9ULZ0 132 aa14.77□□□□□ -0.05
SMPD3-203ENST00000563226 IGHV3OR16-13A0A075B7E8 117 aa14.76□□□□□ -0.05
SMPD3-203ENST00000563226 IGHV3-74A0A0B4J1X5 117 aa14.76□□□□□ -0.05
SMPD3-203ENST00000563226 FAM223BA6NKX1 122 aa14.76□□□□□ -0.05
SMPD3-203ENST00000563226 ZNF207O43670 478 aaKnown RBP14.76□□□□□ -0.05
SMPD3-203ENST00000563226 BUB3O43684 328 aa14.76□□□□□ -0.05
SMPD3-203ENST00000563226 P01737 135 aa14.76□□□□□ -0.05
SMPD3-203ENST00000563226 APOHP02749 345 aaPredicted RBP14.76□□□□□ -0.05
SMPD3-203ENST00000563226 PPIFP30405 207 aaKnown RBP14.76□□□□□ -0.05
SMPD3-203ENST00000563226 RAB4BP61018 213 aa14.76□□□□□ -0.05
SMPD3-203ENST00000563226 DEFB112Q30KQ8 113 aa14.76□□□□□ -0.05
SMPD3-203ENST00000563226 FAM223AQ8IWN6 122 aa14.76□□□□□ -0.05
SMPD3-203ENST00000563226 ZC2HC1AQ96GY0 325 aa14.76□□□□□ -0.05
SMPD3-203ENST00000563226 TPPP2P59282 170 aa14.75□□□□□ -0.05
SMPD3-203ENST00000563226 KIAA1644Q3SXP7 199 aa14.75□□□□□ -0.05
SMPD3-203ENST00000563226 WDR73Q6P4I2 378 aa14.75□□□□□ -0.05
SMPD3-203ENST00000563226 IGHV3-49A0A0A0MS15 119 aa14.75□□□□□ -0.05
SMPD3-203ENST00000563226 TRBV12-3P01733 135 aa14.75□□□□□ -0.05
SMPD3-203ENST00000563226 IGHV4-59P01825 116 aa14.75□□□□□ -0.05
SMPD3-203ENST00000563226 IGHG4P01861 327 aa14.75□□□□□ -0.05
SMPD3-203ENST00000563226 PSG9Q00887 426 aa14.75□□□□□ -0.05
SMPD3-203ENST00000563226 GDF5OSQ5U4N7 250 aa14.75□□□□□ -0.05
SMPD3-203ENST00000563226 GTSF1Q8WW33 167 aa14.75□□□□□ -0.05
SMPD3-203ENST00000563226 TMEM190Q8WZ59 177 aa14.75□□□□□ -0.05
SMPD3-203ENST00000563226 IGKV2-40A0A087WW87 121 aaPredicted RBP14.74□□□□□ -0.05
SMPD3-203ENST00000563226 F2Z2F3 143 aa14.74□□□□□ -0.05
SMPD3-203ENST00000563226 K7EQM0 130 aa14.74□□□□□ -0.05
SMPD3-203ENST00000563226 IGKV2D-40P01614 121 aaPredicted RBP14.74□□□□□ -0.05
SMPD3-203ENST00000563226 LINC00310P59036 64 aa14.74□□□□□ -0.05
SMPD3-203ENST00000563226 RPL19P84098 196 aaKnown RBP14.74□□□□□ -0.05
SMPD3-203ENST00000563226 LOXL1Q08397 574 aaPredicted RBP14.74□□□□□ -0.05
SMPD3-203ENST00000563226 GBGT1Q8N5D6 347 aa14.74□□□□□ -0.05
SMPD3-203ENST00000563226 NPIPB6E9PJ23 425 aa14.73□□□□□ -0.05
SMPD3-203ENST00000563226 M0QZK8 103 aa14.73□□□□□ -0.05
SMPD3-203ENST00000563226 MT-ND6P03923 174 aa14.73□□□□□ -0.05
SMPD3-203ENST00000563226 DEFB113Q30KQ7 82 aa14.73□□□□□ -0.05
SMPD3-203ENST00000563226 DAZAP1Q96EP5 407 aaKnown RBP14.73□□□□□ -0.05
SMPD3-203ENST00000563226 KLK15Q9H2R5 256 aa14.73□□□□□ -0.05
SMPD3-203ENST00000563226 IGHV4-31P0DP07 118 aa14.73□□□□□ -0.05
SMPD3-203ENST00000563226 GZMBP10144 247 aa14.73□□□□□ -0.05
SMPD3-203ENST00000563226 CRISP2P16562 243 aa14.73□□□□□ -0.05
SMPD3-203ENST00000563226 LCNL1Q6ZST4 164 aa14.73□□□□□ -0.05
SMPD3-203ENST00000563226 C8orf49Q96NF6 230 aa14.73□□□□□ -0.05
SMPD3-203ENST00000563226 ZNF331Q9NQX6 463 aaPredicted RBP14.73□□□□□ -0.05
SMPD3-203ENST00000563226 ZFP30Q9Y2G7 519 aa14.73□□□□□ -0.05
SMPD3-203ENST00000563226 CHEK1O14757 476 aa14.72□□□□□ -0.05
SMPD3-203ENST00000563226 CRIP1P50238 77 aa14.72□□□□□ -0.05
SMPD3-203ENST00000563226 RELQ04864 619 aaPredicted RBP14.72□□□□□ -0.05
SMPD3-203ENST00000563226 TMEM95Q3KNT9 176 aa14.72□□□□□ -0.05
SMPD3-203ENST00000563226 CT83Q5H943 113 aa14.72□□□□□ -0.05
SMPD3-203ENST00000563226 Q5PR19 223 aa14.72□□□□□ -0.05
SMPD3-203ENST00000563226 WIPF2Q8TF74 440 aaPredicted RBP14.72□□□□□ -0.05
SMPD3-203ENST00000563226 ZNF705FA8MVS1 300 aaPredicted RBP14.72□□□□□ -0.05
SMPD3-203ENST00000563226 J3QLI3 93 aa14.72□□□□□ -0.05
SMPD3-203ENST00000563226 HLA-DQA1P01909 254 aa14.72□□□□□ -0.05
SMPD3-203ENST00000563226 CSN1S1P47710 185 aa14.72□□□□□ -0.05
SMPD3-203ENST00000563226 SLAQ13239 276 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms