RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 VAMP8Q9BV40 100 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 TRAV41A0A0B4J266 112 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 C20orf202A1L168 122 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 J3QLI3 93 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 Q6ZWC4 215 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 CMTM2Q8TAZ6 248 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 SFRP2Q96HF1 295 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 PSMG3-AS1Q96PY0 264 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 TXN2Q99757 166 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 ZNF586Q9NXT0 402 aa7.33□□□□□ -1.24
LINC00838-201ENST00000562956 IGHV3-35A0A0C4DH35 117 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 CBY3A6NI87 242 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 CCL25O15444 150 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 FCGR2BP31994 310 aaPredicted RBP7.32□□□□□ -1.24
LINC00838-201ENST00000562956 GPR183P32249 361 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 GNG4P50150 75 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 KRTDAPP60985 99 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 RBX1P62877 108 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 BLCAPP62952 87 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 GNG5P63218 68 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 DEFB112Q30KQ8 113 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 Q6ZS46 218 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 STPG4Q8N801 248 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 ZNF414Q96IQ9 312 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 TMEM14CQ9P0S9 112 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 PGPA6NDG6 321 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 F2Z2F3 143 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 CLEC3BP05452 202 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 CD99P14209 185 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 CRIP2P52943 208 aaPredicted RBP7.32□□□□□ -1.24
LINC00838-201ENST00000562956 BTF3L4Q96K17 158 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 IGF2BP2-AS1Q96M15 143 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 CCDC140Q96MF4 163 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 LY96Q9Y6Y9 160 aa7.32□□□□□ -1.24
LINC00838-201ENST00000562956 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.31□□□□□ -1.24
LINC00838-201ENST00000562956 IGHV3OR16-8A0A075B7F1 116 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 PEX7O00628 323 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 COL5A1-AS1Q5SY13 56 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 PYGO2Q9BRQ0 406 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 SAMD10Q9BYL1 202 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 IGLV2-8P01709 118 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 IGHV4-59P01825 116 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 IGHG2P01859 326 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 IGF1P05019 195 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 SLC25A5P05141 298 aaKnown RBP7.31□□□□□ -1.24
LINC00838-201ENST00000562956 HIST1H1EP10412 219 aaKnown RBP7.31□□□□□ -1.24
LINC00838-201ENST00000562956 ATOH7Q8N100 152 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 MBD6Q96DN6 1003 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 C17orf77Q96MU5 243 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 Q9H3A6 140 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 EPDR1Q9UM22 224 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 RNF114Q9Y508 228 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 MRPS12O15235 138 aaKnown RBP7.31□□□□□ -1.24
LINC00838-201ENST00000562956 CBLN1P23435 193 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 CLEC19AQ6UXS0 136 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 BPIFA4PQ86YQ2 179 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 NHLRC2Q8NBF2 726 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 CDC42EP3Q9UKI2 254 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 ZFP30Q9Y2G7 519 aa7.31□□□□□ -1.24
LINC00838-201ENST00000562956 ZNF469Q96JG9 3925 aaPredicted RBP7.3□□□□□ -1.24
LINC00838-201ENST00000562956 M0QZ24 198 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 ISLRO14498 428 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 SPINK4O60575 86 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 SERF1AO75920 110 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 IGLC2P0DOY2 106 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 HINT1P49773 126 aaPredicted RBP7.3□□□□□ -1.24
LINC00838-201ENST00000562956 TMEM183BQ1AE95 376 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 SAPCD1Q5SSQ6 148 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 EXOC3-AS1Q8N2X6 119 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 OR10G8Q8NGN5 311 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 RPH3ALQ9UNE2 315 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 TRBV19A0A075B6N1 114 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 SCGB2A1O75556 95 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 FSHBP01225 129 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 SRP14P37108 136 aaKnown RBP7.3□□□□□ -1.24
LINC00838-201ENST00000562956 KCNIP4Q6PIL6 250 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 PRSS57Q6UWY2 283 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 BAGE3Q86Y29 109 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 BAGE2Q86Y30 109 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 EEF1AKMT3Q96AZ1 226 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 SGK494Q96LW2 274 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 GNB4Q9HAV0 340 aa7.3□□□□□ -1.24
LINC00838-201ENST00000562956 TRBV7-1A0A0A6YYK4 115 aa7.29□□□□□ -1.24
LINC00838-201ENST00000562956 SLC17A3O00476 420 aa7.29□□□□□ -1.24
LINC00838-201ENST00000562956 FRMD6-AS1P0C7T7 363 aa7.29□□□□□ -1.24
LINC00838-201ENST00000562956 PPIFP30405 207 aaKnown RBP7.29□□□□□ -1.24
LINC00838-201ENST00000562956 IER3P46695 156 aa7.29□□□□□ -1.24
LINC00838-201ENST00000562956 ATP5G2Q06055 141 aa7.29□□□□□ -1.24
LINC00838-201ENST00000562956 Q6ZN92 141 aa7.29□□□□□ -1.24
LINC00838-201ENST00000562956 OR4F17Q8NGA8 305 aa7.29□□□□□ -1.24
LINC00838-201ENST00000562956 TRGV3P03979 118 aa7.29□□□□□ -1.24
LINC00838-201ENST00000562956 MGST1P10620 155 aaKnown RBP7.29□□□□□ -1.24
LINC00838-201ENST00000562956 C5orf17Q8NAS9 161 aa7.29□□□□□ -1.24
LINC00838-201ENST00000562956 WFDC11Q8NEX6 87 aa7.29□□□□□ -1.24
LINC00838-201ENST00000562956 RNASE7Q9H1E1 156 aaKnown RBP7.29□□□□□ -1.24
LINC00838-201ENST00000562956 ZFAND3Q9H8U3 227 aa7.29□□□□□ -1.24
LINC00838-201ENST00000562956 CIARTQ8N365 385 aaPredicted RBP7.28□□□□□ -1.24
LINC00838-201ENST00000562956 OTORQ9NRC9 128 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 RABAC1Q9UI14 185 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 DOPEY2Q9Y3R5 2298 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms