RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 SLC35B3Q9H1N7 401 aa11.72□□□□□ -0.53
COMMD4-206ENST00000562610 MED28Q9H204 178 aa11.72□□□□□ -0.53
COMMD4-206ENST00000562610 HSPB11Q9Y547 144 aa11.72□□□□□ -0.53
COMMD4-206ENST00000562610 ZNF705EA8MWA4 302 aaPredicted RBP11.71□□□□□ -0.53
COMMD4-206ENST00000562610 H3BTX0 84 aa11.71□□□□□ -0.53
COMMD4-206ENST00000562610 MIFP14174 115 aa11.71□□□□□ -0.53
COMMD4-206ENST00000562610 CXCL2P19875 107 aa11.71□□□□□ -0.53
COMMD4-206ENST00000562610 RPL12P30050 165 aaKnown RBP11.71□□□□□ -0.53
COMMD4-206ENST00000562610 PSG9Q00887 426 aa11.71□□□□□ -0.53
COMMD4-206ENST00000562610 ZNF709Q8N972 641 aa11.71□□□□□ -0.53
COMMD4-206ENST00000562610 CHAC2Q8WUX2 184 aa11.71□□□□□ -0.53
COMMD4-206ENST00000562610 CLUHP3Q96NS8 147 aa11.71□□□□□ -0.53
COMMD4-206ENST00000562610 LYSTQ99698 3801 aa11.71□□□□□ -0.53
COMMD4-206ENST00000562610 SLC50A1Q9BRV3 221 aa11.71□□□□□ -0.53
COMMD4-206ENST00000562610 SMIM3Q9BZL3 60 aa11.71□□□□□ -0.53
COMMD4-206ENST00000562610 MFFQ9GZY8 342 aa11.71□□□□□ -0.53
COMMD4-206ENST00000562610 KCNIP2Q9NS61 270 aa11.71□□□□□ -0.53
COMMD4-206ENST00000562610 X6R8D5 127 aa11.71□□□□□ -0.53
COMMD4-206ENST00000562610 DYNC2H1Q8NCM8 4307 aaKnown RBP11.71□□□□□ -0.53
COMMD4-206ENST00000562610 IGHV3OR16-12A0A075B7B8 117 aa11.7□□□□□ -0.54
COMMD4-206ENST00000562610 TRAV5A0A0B4J249 113 aa11.7□□□□□ -0.54
COMMD4-206ENST00000562610 NUPR2A6NF83 97 aa11.7□□□□□ -0.54
COMMD4-206ENST00000562610 ZNF705DP0CH99 300 aaPredicted RBP11.7□□□□□ -0.54
COMMD4-206ENST00000562610 ZNF705BP0CI00 300 aaPredicted RBP11.7□□□□□ -0.54
COMMD4-206ENST00000562610 CNN1P51911 297 aaKnown RBP11.7□□□□□ -0.54
COMMD4-206ENST00000562610 FCN2Q15485 313 aa11.7□□□□□ -0.54
COMMD4-206ENST00000562610 RGS21Q2M5E4 152 aa11.7□□□□□ -0.54
COMMD4-206ENST00000562610 C11orf45Q8TAV5 145 aa11.7□□□□□ -0.54
COMMD4-206ENST00000562610 WDR61Q9GZS3 305 aaKnown RBP11.7□□□□□ -0.54
COMMD4-206ENST00000562610 TENM2Q9NT68 2774 aa11.7□□□□□ -0.54
COMMD4-206ENST00000562610 C17orf112F2Z3M2 114 aa11.69□□□□□ -0.54
COMMD4-206ENST00000562610 SLC17A3O00476 420 aa11.69□□□□□ -0.54
COMMD4-206ENST00000562610 DUSP14O95147 198 aaKnown RBP11.69□□□□□ -0.54
COMMD4-206ENST00000562610 IGLC2P0DOY2 106 aa11.69□□□□□ -0.54
COMMD4-206ENST00000562610 PRB4P10163 310 aaPredicted RBP11.69□□□□□ -0.54
COMMD4-206ENST00000562610 NANOS2P60321 138 aaKnown RBP11.69□□□□□ -0.54
COMMD4-206ENST00000562610 HIST1H1AQ02539 215 aaPredicted RBP11.69□□□□□ -0.54
COMMD4-206ENST00000562610 PSG3Q16557 428 aa11.69□□□□□ -0.54
COMMD4-206ENST00000562610 GCSAMLQ5JQS6 135 aa11.69□□□□□ -0.54
COMMD4-206ENST00000562610 OR11H7Q8NGC8 314 aa11.69□□□□□ -0.54
COMMD4-206ENST00000562610 ZNF331Q9NQX6 463 aaPredicted RBP11.69□□□□□ -0.54
COMMD4-206ENST00000562610 RBMY1A1P0DJD3 496 aaKnown RBP11.68□□□□□ -0.54
COMMD4-206ENST00000562610 RBMY1CP0DJD4 496 aa11.68□□□□□ -0.54
COMMD4-206ENST00000562610 RBMY1FQ15415 496 aaKnown RBP11.68□□□□□ -0.54
COMMD4-206ENST00000562610 RPUSD4Q96CM3 377 aaKnown RBP11.68□□□□□ -0.54
COMMD4-206ENST00000562610 HRH4Q9H3N8 390 aa11.68□□□□□ -0.54
COMMD4-206ENST00000562610 LCE6AA0A183 80 aa11.67□□□□□ -0.54
COMMD4-206ENST00000562610 H3BQ15 152 aa11.67□□□□□ -0.54
COMMD4-206ENST00000562610 JTBO76095 146 aa11.67□□□□□ -0.54
COMMD4-206ENST00000562610 IFNA5P01569 189 aa11.67□□□□□ -0.54
COMMD4-206ENST00000562610 RHOBP62745 196 aa11.67□□□□□ -0.54
COMMD4-206ENST00000562610 SPINK13Q1W4C9 94 aa11.67□□□□□ -0.54
COMMD4-206ENST00000562610 OR8A1Q8NGG7 326 aa11.67□□□□□ -0.54
COMMD4-206ENST00000562610 SCGB1C1Q8TD33 95 aa11.67□□□□□ -0.54
COMMD4-206ENST00000562610 PHLDA1Q8WV24 401 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-206ENST00000562610 PPP1R14DQ9NXH3 145 aa11.67□□□□□ -0.54
COMMD4-206ENST00000562610 GOLT1BQ9Y3E0 138 aa11.67□□□□□ -0.54
COMMD4-206ENST00000562610 A8MTW9 85 aa11.66□□□□□ -0.54
COMMD4-206ENST00000562610 M0R2Z0 102 aa11.66□□□□□ -0.54
COMMD4-206ENST00000562610 GUK1Q16774 197 aa11.66□□□□□ -0.54
COMMD4-206ENST00000562610 CEMP1Q6PRD7 247 aaPredicted RBP11.66□□□□□ -0.54
COMMD4-206ENST00000562610 AMTNQ6UX39 209 aa11.66□□□□□ -0.54
COMMD4-206ENST00000562610 ZNF705AQ6ZN79 300 aaPredicted RBP11.66□□□□□ -0.54
COMMD4-206ENST00000562610 ZNF586Q9NXT0 402 aa11.66□□□□□ -0.54
COMMD4-206ENST00000562610 ZNF705FA8MVS1 300 aaPredicted RBP11.65□□□□□ -0.54
COMMD4-206ENST00000562610 BOLA2-SMG1P6H3BVE0 249 aa11.65□□□□□ -0.54
COMMD4-206ENST00000562610 INSP01308 110 aa11.65□□□□□ -0.54
COMMD4-206ENST00000562610 PYYP10082 97 aa11.65□□□□□ -0.54
COMMD4-206ENST00000562610 TMEM208Q9BTX3 173 aa11.65□□□□□ -0.54
COMMD4-206ENST00000562610 KLK5Q9Y337 293 aaPredicted RBP11.65□□□□□ -0.54
COMMD4-206ENST00000562610 RYR3Q15413 4870 aa11.64□□□□□ -0.55
COMMD4-206ENST00000562610 AMBPP02760 352 aa11.64□□□□□ -0.55
COMMD4-206ENST00000562610 GIPP09681 153 aaPredicted RBP11.64□□□□□ -0.55
COMMD4-206ENST00000562610 FFAR4Q5NUL3 377 aa11.64□□□□□ -0.55
COMMD4-206ENST00000562610 MIR17HGQ75NE6 70 aa11.64□□□□□ -0.55
COMMD4-206ENST00000562610 BAP18Q8IXM2 172 aa11.64□□□□□ -0.55
COMMD4-206ENST00000562610 BLNKQ8WV28 456 aa11.64□□□□□ -0.55
COMMD4-206ENST00000562610 SAT2Q96F10 170 aaPredicted RBP11.64□□□□□ -0.55
COMMD4-206ENST00000562610 IGF2BP2-AS1Q96M15 143 aa11.64□□□□□ -0.55
COMMD4-206ENST00000562610 SLC25A2Q9BXI2 301 aa11.64□□□□□ -0.55
COMMD4-206ENST00000562610 MRPL32Q9BYC8 188 aaKnown RBP11.64□□□□□ -0.55
COMMD4-206ENST00000562610 TMEM14CQ9P0S9 112 aa11.64□□□□□ -0.55
COMMD4-206ENST00000562610 ALMS1Q8TCU4 4167 aa11.64□□□□□ -0.55
COMMD4-206ENST00000562610 EMP1P54849 157 aa11.63□□□□□ -0.55
COMMD4-206ENST00000562610 OR10J6PQ8NGY7 276 aa11.63□□□□□ -0.55
COMMD4-206ENST00000562610 NEU1Q99519 415 aa11.63□□□□□ -0.55
COMMD4-206ENST00000562610 WFDC1Q9HC57 220 aa11.63□□□□□ -0.55
COMMD4-206ENST00000562610 CELA1Q9UNI1 258 aa11.63□□□□□ -0.55
COMMD4-206ENST00000562610 TIMM9Q9Y5J7 89 aa11.63□□□□□ -0.55
COMMD4-206ENST00000562610 RFNGQ9Y644 331 aa11.63□□□□□ -0.55
COMMD4-206ENST00000562610 TRBV19A0A075B6N1 114 aa11.62□□□□□ -0.55
COMMD4-206ENST00000562610 TRAV12-2A0A075B6T6 113 aa11.62□□□□□ -0.55
COMMD4-206ENST00000562610 SMIM9A6NGZ8 99 aa11.62□□□□□ -0.55
COMMD4-206ENST00000562610 PRAC2D3DTV9 90 aa11.62□□□□□ -0.55
COMMD4-206ENST00000562610 ZNF253O75346 499 aa11.62□□□□□ -0.55
COMMD4-206ENST00000562610 HBE1P02100 147 aa11.62□□□□□ -0.55
COMMD4-206ENST00000562610 HIST1H1EP10412 219 aaKnown RBP11.62□□□□□ -0.55
COMMD4-206ENST00000562610 OXA1LQ15070 435 aa11.62□□□□□ -0.55
COMMD4-206ENST00000562610 C1orf158Q8N1D5 194 aa11.62□□□□□ -0.55
COMMD4-206ENST00000562610 ASB13Q8WXK3 278 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms