RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 GRAMD2BQ96HH9 432 aa17.03■□□□□ 0.32
SYNGR3-202ENST00000562045 IGHV3OR16-13A0A075B7E8 117 aa17.02■□□□□ 0.32
SYNGR3-202ENST00000562045 IGHV3-74A0A0B4J1X5 117 aa17.02■□□□□ 0.32
SYNGR3-202ENST00000562045 IGHV7-4-1A0A0J9YVY3 117 aa17.02■□□□□ 0.32
SYNGR3-202ENST00000562045 A0A1W2PRE2 83 aa17.02■□□□□ 0.32
SYNGR3-202ENST00000562045 FAM74A7A6NL05 159 aa17.02■□□□□ 0.32
SYNGR3-202ENST00000562045 OVOL1O14753 267 aa17.02■□□□□ 0.32
SYNGR3-202ENST00000562045 IGLC2P0DOY2 106 aa17.02■□□□□ 0.32
SYNGR3-202ENST00000562045 IGHV3-49A0A0A0MS15 119 aa17.01■□□□□ 0.31
SYNGR3-202ENST00000562045 IGHV3-66A0A0C4DH42 116 aa17.01■□□□□ 0.31
SYNGR3-202ENST00000562045 C11orf94C9JXX5 98 aa17.01■□□□□ 0.31
SYNGR3-202ENST00000562045 BLNKQ8WV28 456 aa17.01■□□□□ 0.31
SYNGR3-202ENST00000562045 YTHDF2Q9Y5A9 579 aaKnown RBP17.01■□□□□ 0.31
SYNGR3-202ENST00000562045 BMI1P35226 326 aa17.01■□□□□ 0.31
SYNGR3-202ENST00000562045 GALR1P47211 349 aa17.01■□□□□ 0.31
SYNGR3-202ENST00000562045 C16orf54Q6UWD8 224 aa17.01■□□□□ 0.31
SYNGR3-202ENST00000562045 NKX6-2Q9C056 277 aaPredicted RBP17.01■□□□□ 0.31
SYNGR3-202ENST00000562045 ZNF586Q9NXT0 402 aa17.01■□□□□ 0.31
SYNGR3-202ENST00000562045 TMEM213A2RRL7 107 aa17■□□□□ 0.31
SYNGR3-202ENST00000562045 H3BQ15 152 aa17■□□□□ 0.31
SYNGR3-202ENST00000562045 SNRPCP09234 159 aaKnown RBP17■□□□□ 0.31
SYNGR3-202ENST00000562045 EDN2P20800 178 aa17■□□□□ 0.31
SYNGR3-202ENST00000562045 SMPXQ9UHP9 88 aa17■□□□□ 0.31
SYNGR3-202ENST00000562045 MEGF8Q7Z7M0 2845 aa17■□□□□ 0.31
SYNGR3-202ENST00000562045 C9JQL5 133 aa16.99■□□□□ 0.31
SYNGR3-202ENST00000562045 NDUFS6O75380 124 aaKnown RBP16.99■□□□□ 0.31
SYNGR3-202ENST00000562045 ATF4P18848 351 aaPredicted RBP16.99■□□□□ 0.31
SYNGR3-202ENST00000562045 ATP5G3P48201 142 aa16.99■□□□□ 0.31
SYNGR3-202ENST00000562045 CD81P60033 236 aa16.99■□□□□ 0.31
SYNGR3-202ENST00000562045 PDE6HQ13956 83 aa16.99■□□□□ 0.31
SYNGR3-202ENST00000562045 ELOVL1Q9BW60 279 aa16.99■□□□□ 0.31
SYNGR3-202ENST00000562045 RHPN1-AS1Q9BWJ2 59 aa16.99■□□□□ 0.31
SYNGR3-202ENST00000562045 SLC35B3Q9H1N7 401 aa16.99■□□□□ 0.31
SYNGR3-202ENST00000562045 TRBV19A0A075B6N1 114 aa16.99■□□□□ 0.31
SYNGR3-202ENST00000562045 GLMPQ8WWB7 406 aa16.99■□□□□ 0.31
SYNGR3-202ENST00000562045 TMEM218A2RU14 115 aa16.98■□□□□ 0.31
SYNGR3-202ENST00000562045 PDE6DO43924 150 aa16.98■□□□□ 0.31
SYNGR3-202ENST00000562045 SRP19P09132 144 aaKnown RBP16.98■□□□□ 0.31
SYNGR3-202ENST00000562045 SIGLEC15Q6ZMC9 328 aa16.98■□□□□ 0.31
SYNGR3-202ENST00000562045 PEMTQ9UBM1 199 aa16.98■□□□□ 0.31
SYNGR3-202ENST00000562045 H3BTX0 84 aa16.97■□□□□ 0.31
SYNGR3-202ENST00000562045 CHEK1O14757 476 aa16.97■□□□□ 0.31
SYNGR3-202ENST00000562045 SFTA3P0C7M3 94 aa16.97■□□□□ 0.31
SYNGR3-202ENST00000562045 RANP62826 216 aaKnown RBP16.97■□□□□ 0.31
SYNGR3-202ENST00000562045 BEAN1Q3B7T3 259 aa16.97■□□□□ 0.31
SYNGR3-202ENST00000562045 OR9G4Q8NGQ1 327 aa16.97■□□□□ 0.31
SYNGR3-202ENST00000562045 SMAD5-AS1Q9Y6J3 95 aa16.97■□□□□ 0.31
SYNGR3-202ENST00000562045 A0A087X0K7 114 aa16.96■□□□□ 0.31
SYNGR3-202ENST00000562045 ZNF785A8K8V0 405 aa16.96■□□□□ 0.31
SYNGR3-202ENST00000562045 GGTLC3B5MD39 225 aa16.96■□□□□ 0.31
SYNGR3-202ENST00000562045 KRBOX1C9JBD0 128 aa16.96■□□□□ 0.31
SYNGR3-202ENST00000562045 TMEM250H0YL14 139 aa16.96■□□□□ 0.31
SYNGR3-202ENST00000562045 MEOX2P50222 304 aa16.96■□□□□ 0.31
SYNGR3-202ENST00000562045 SUMO1P63165 101 aaKnown RBP16.96■□□□□ 0.31
SYNGR3-202ENST00000562045 CCDC28AQ8IWP9 274 aa16.96■□□□□ 0.3
SYNGR3-202ENST00000562045 LYPD1Q8N2G4 141 aa16.96■□□□□ 0.3
SYNGR3-202ENST00000562045 HELTA6NFD8 242 aa16.95■□□□□ 0.3
SYNGR3-202ENST00000562045 C2orf70A6NJV1 201 aa16.95■□□□□ 0.3
SYNGR3-202ENST00000562045 F6UZH7 168 aa16.95■□□□□ 0.3
SYNGR3-202ENST00000562045 NDUFB4O95168 129 aa16.95■□□□□ 0.3
SYNGR3-202ENST00000562045 KRTAP10-11P60412 298 aa16.95■□□□□ 0.3
SYNGR3-202ENST00000562045 ADAMTSL5Q6ZMM2 481 aa16.95■□□□□ 0.3
SYNGR3-202ENST00000562045 CYB561D1Q8N8Q1 229 aa16.95■□□□□ 0.3
SYNGR3-202ENST00000562045 C17orf77Q96MU5 243 aa16.95■□□□□ 0.3
SYNGR3-202ENST00000562045 MCRIP2Q9BUT9 160 aaKnown RBP16.95■□□□□ 0.3
SYNGR3-202ENST00000562045 Q9H3A6 140 aa16.95■□□□□ 0.3
SYNGR3-202ENST00000562045 ZNF253O75346 499 aa16.94■□□□□ 0.3
SYNGR3-202ENST00000562045 SAP30O75446 220 aa16.94■□□□□ 0.3
SYNGR3-202ENST00000562045 PRB2P02812 416 aaPredicted RBP16.94■□□□□ 0.3
SYNGR3-202ENST00000562045 CBLN1P23435 193 aa16.94■□□□□ 0.3
SYNGR3-202ENST00000562045 CSN3P07498 182 aa16.93■□□□□ 0.3
SYNGR3-202ENST00000562045 CEBPGP53567 150 aa16.93■□□□□ 0.3
SYNGR3-202ENST00000562045 PSG9Q00887 426 aa16.93■□□□□ 0.3
SYNGR3-202ENST00000562045 KPRPQ5T749 579 aaPredicted RBP16.93■□□□□ 0.3
SYNGR3-202ENST00000562045 C9orf66Q5T8R8 295 aa16.93■□□□□ 0.3
SYNGR3-202ENST00000562045 LINC00052Q96N35 136 aa16.93■□□□□ 0.3
SYNGR3-202ENST00000562045 TCEAL7Q9BRU2 100 aa16.93■□□□□ 0.3
SYNGR3-202ENST00000562045 OTORQ9NRC9 128 aa16.93■□□□□ 0.3
SYNGR3-202ENST00000562045 PGPA6NDG6 321 aa16.93■□□□□ 0.3
SYNGR3-202ENST00000562045 SLC17A3O00476 420 aa16.93■□□□□ 0.3
SYNGR3-202ENST00000562045 SEC11CQ9BY50 192 aa16.93■□□□□ 0.3
SYNGR3-202ENST00000562045 SELENOKQ9Y6D0 94 aa16.93■□□□□ 0.3
SYNGR3-202ENST00000562045 F8W036 122 aa16.92■□□□□ 0.3
SYNGR3-202ENST00000562045 WIPF1O43516 503 aa16.92■□□□□ 0.3
SYNGR3-202ENST00000562045 FOLR2P14207 255 aa16.92■□□□□ 0.3
SYNGR3-202ENST00000562045 SOHLH1Q5JUK2 328 aa16.92■□□□□ 0.3
SYNGR3-202ENST00000562045 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.92■□□□□ 0.3
SYNGR3-202ENST00000562045 AAMDCQ9H7C9 122 aa16.92■□□□□ 0.3
SYNGR3-202ENST00000562045 SLC50A1Q9BRV3 221 aa16.91■□□□□ 0.3
SYNGR3-202ENST00000562045 SCO2A0A1W2PP80 73 aa16.9■□□□□ 0.3
SYNGR3-202ENST00000562045 SLC25A5P05141 298 aaKnown RBP16.9■□□□□ 0.3
SYNGR3-202ENST00000562045 ADCYAP1P18509 176 aa16.9■□□□□ 0.3
SYNGR3-202ENST00000562045 TCF24Q7RTU0 167 aa16.9■□□□□ 0.3
SYNGR3-202ENST00000562045 C5orf17Q8NAS9 161 aa16.9■□□□□ 0.3
SYNGR3-202ENST00000562045 C11orf52Q96A22 123 aa16.9■□□□□ 0.3
SYNGR3-202ENST00000562045 RPL11P62913 178 aaKnown RBP16.9■□□□□ 0.3
SYNGR3-202ENST00000562045 EGFEM1PQ0D2K5 195 aa16.9■□□□□ 0.3
SYNGR3-202ENST00000562045 FAM90A2PQ658T7 463 aa16.9■□□□□ 0.3
SYNGR3-202ENST00000562045 EXOC3-AS1Q8N2X6 119 aa16.9■□□□□ 0.3
SYNGR3-202ENST00000562045 NRN1Q9NPD7 142 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms