RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 ZNF833PQ6ZTB9 187 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 SSX9Q7RTT3 188 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 S100A7AQ86SG5 101 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 PDPNQ86YL7 162 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 Q8N2B8 174 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 ZNF439Q8NDP4 499 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 OR10G9Q8NGN4 311 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 OR10G7Q8NGN6 311 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 OR1L6Q8NGR2 347 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 OR1L8Q8NGR8 309 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 RNASEH2CQ8TDP1 164 aaKnown RBP2.42□□□□□ -2.02
SPG11-225ENST00000561391 FLYWCH2Q96CP2 140 aaKnown RBP2.42□□□□□ -2.02
SPG11-225ENST00000561391 TVP23CQ96ET8 276 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 RNF2Q99496 336 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 COMMD5Q9GZQ3 224 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 SH3BGRL3Q9H299 93 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 IFI27L2Q9H2X8 130 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 PLEKHA3Q9HB20 300 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 RPRMQ9NS64 109 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 SLC35D1Q9NTN3 355 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 TMEM14BQ9NUH8 114 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 BET1LQ9NYM9 111 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 MLXQ9UH92 298 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 RNF24Q9Y225 148 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 WASHC3Q9Y3C0 194 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 OR51B2Q9Y5P1 312 aa2.42□□□□□ -2.02
SPG11-225ENST00000561391 FLG2Q5D862 2391 aaPredicted RBP2.42□□□□□ -2.02
SPG11-225ENST00000561391 DNAH17Q9UFH2 4485 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 IGHV3-43A0A0B4J1X8 118 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 TRAV34A0A0B4J273 112 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 A0A0G2JRQ6 117 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 C7orf77A4D0Y5 90 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 MAP1LC3B2A6NCE7 125 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 NUPR2A6NF83 97 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 FAM74A7A6NL05 159 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 OOSP1A8MZH6 123 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 C1orf196B1AJZ1 125 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 F6UZH7 168 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 H3BP45 60 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 M0R1W7 72 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 DNASE2O00115 360 aaPredicted RBP2.41□□□□□ -2.02
SPG11-225ENST00000561391 CORTO00230 105 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 PPP1R2P9O14990 202 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 RTL8CO15255 209 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 CXorf1O96002 111 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 IGF1P05019 195 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 FABP1P07148 127 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 SAA2P0DJI9 122 aaPredicted RBP2.41□□□□□ -2.02
SPG11-225ENST00000561391 CT45A6P0DMU7 189 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 CT45A5P0DMU8 189 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 CT45A7P0DMV0 189 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 IGHV3-43DP0DP04 118 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 BCL2P10415 239 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 FGF7P21781 194 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 NPY1RP25929 384 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 S100A7P31151 101 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 SAA4P35542 130 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 RPL29P47914 159 aaKnown RBP2.41□□□□□ -2.02
SPG11-225ENST00000561391 FHITP49789 147 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 CRIP2P52943 208 aaPredicted RBP2.41□□□□□ -2.02
SPG11-225ENST00000561391 TAS2R45P59539 299 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 SELENOTP62341 195 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 RHOBP62745 196 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 RPL8P62917 257 aaKnown RBP2.41□□□□□ -2.02
SPG11-225ENST00000561391 RPL19P84098 196 aaKnown RBP2.41□□□□□ -2.02
SPG11-225ENST00000561391 PRCDQ00LT1 54 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 AKR1C1Q04828 323 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 TMEM267Q0VDI3 215 aaPredicted RBP2.41□□□□□ -2.02
SPG11-225ENST00000561391 LTC4SQ16873 150 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 TMEM241Q24JQ0 296 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 HLA-DRB5Q30154 266 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 VMA21Q3ZAQ7 101 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 C2orf83Q53S99 150 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 OR2B11Q5JQS5 317 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 OR8G2PQ6IF36 304 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 OR4A47Q6IF82 309 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 ZNF841Q6ZN19 808 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 TGIF2LXQ8IUE1 241 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 ABHD12Q8N2K0 398 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 FAM216BQ8N7L0 139 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 TPRX1Q8N7U7 411 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.41□□□□□ -2.02
SPG11-225ENST00000561391 STXBP6Q8NFX7 210 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 OR4X2Q8NGF9 303 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 OR13D1Q8NGV5 346 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 UBALD1Q8TB05 177 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 TMEM167AQ8TBQ9 72 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 PIFOQ8TCI5 191 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 H1FXQ92522 213 aaKnown RBP2.41□□□□□ -2.02
SPG11-225ENST00000561391 RPUSD4Q96CM3 377 aaKnown RBP2.41□□□□□ -2.02
SPG11-225ENST00000561391 BSCL2Q96G97 398 aaPredicted RBP2.41□□□□□ -2.02
SPG11-225ENST00000561391 CYYR1Q96J86 154 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 SLC35E1Q96K37 410 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 TCEAL7Q9BRU2 100 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 SCRT1Q9BWW7 348 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 NPCDR1Q9BY65 106 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 MAP1LC3BQ9GZQ8 125 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 PARP12Q9H0J9 701 aaKnown RBP2.41□□□□□ -2.02
SPG11-225ENST00000561391 TMEM133Q9H2Q1 129 aa2.41□□□□□ -2.02
SPG11-225ENST00000561391 Q9H8V8 135 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms