RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 RRAS2P62070 204 aaPredicted RBP12.19□□□□□ -0.46
CRTC3-208ENST00000560098 DLK1P80370 383 aa12.19□□□□□ -0.46
CRTC3-208ENST00000560098 C6orf223Q8N319 242 aa12.19□□□□□ -0.46
CRTC3-208ENST00000560098 C16orf74Q96GX8 76 aa12.19□□□□□ -0.46
CRTC3-208ENST00000560098 ARL6Q9H0F7 186 aa12.19□□□□□ -0.46
CRTC3-208ENST00000560098 NPVFQ9HCQ7 196 aa12.19□□□□□ -0.46
CRTC3-208ENST00000560098 K7EPK0 472 aa12.18□□□□□ -0.46
CRTC3-208ENST00000560098 CCNKO75909 580 aa12.18□□□□□ -0.46
CRTC3-208ENST00000560098 ANXA7P20073 488 aaKnown RBP12.18□□□□□ -0.46
CRTC3-208ENST00000560098 CDKN1BP46527 198 aa12.18□□□□□ -0.46
CRTC3-208ENST00000560098 TMEM14EPQ6UXP3 125 aa12.18□□□□□ -0.46
CRTC3-208ENST00000560098 CCDC190Q86UF4 302 aa12.18□□□□□ -0.46
CRTC3-208ENST00000560098 RPUSD4Q96CM3 377 aaKnown RBP12.18□□□□□ -0.46
CRTC3-208ENST00000560098 KRTAP4-5Q9BYR2 181 aa12.18□□□□□ -0.46
CRTC3-208ENST00000560098 ARV1Q9H2C2 271 aa12.18□□□□□ -0.46
CRTC3-208ENST00000560098 RNF24Q9Y225 148 aa12.18□□□□□ -0.46
CRTC3-208ENST00000560098 TIMM8BQ9Y5J9 83 aaPredicted RBP12.18□□□□□ -0.46
CRTC3-208ENST00000560098 C16orf90A8MZG2 172 aa12.17□□□□□ -0.46
CRTC3-208ENST00000560098 FNDC10F2Z333 226 aa12.17□□□□□ -0.46
CRTC3-208ENST00000560098 MRPS12O15235 138 aaKnown RBP12.17□□□□□ -0.46
CRTC3-208ENST00000560098 METTL15P1P0C7V9 234 aa12.17□□□□□ -0.46
CRTC3-208ENST00000560098 PRB4P10163 310 aaPredicted RBP12.17□□□□□ -0.46
CRTC3-208ENST00000560098 PATE2Q6UY27 113 aa12.17□□□□□ -0.46
CRTC3-208ENST00000560098 RNF141Q8WVD5 230 aa12.17□□□□□ -0.46
CRTC3-208ENST00000560098 LINC00588Q9Y4M8 146 aa12.17□□□□□ -0.46
CRTC3-208ENST00000560098 LRP1BQ9NZR2 4599 aa12.16□□□□□ -0.46
CRTC3-208ENST00000560098 NDUFB6O95139 128 aa12.16□□□□□ -0.46
CRTC3-208ENST00000560098 CXCL2P19875 107 aa12.16□□□□□ -0.46
CRTC3-208ENST00000560098 SLC38A11Q08AI6 406 aa12.16□□□□□ -0.46
CRTC3-208ENST00000560098 TEPPQ6URK8 271 aa12.16□□□□□ -0.46
CRTC3-208ENST00000560098 ZNF493Q6ZR52 646 aa12.16□□□□□ -0.46
CRTC3-208ENST00000560098 OR10P1Q8NGE3 313 aa12.16□□□□□ -0.46
CRTC3-208ENST00000560098 RNASE8Q8TDE3 154 aaKnown RBP12.16□□□□□ -0.46
CRTC3-208ENST00000560098 NOP10Q9NPE3 64 aaKnown RBP12.16□□□□□ -0.46
CRTC3-208ENST00000560098 MGAT4CQ9UBM8 478 aa12.16□□□□□ -0.46
CRTC3-208ENST00000560098 NAP1L6A6NFF2 107 aa12.15□□□□□ -0.46
CRTC3-208ENST00000560098 H7BYZ3 331 aa12.15□□□□□ -0.46
CRTC3-208ENST00000560098 OR4E1P0C645 316 aa12.15□□□□□ -0.46
CRTC3-208ENST00000560098 CLINT1Q14677 625 aa12.15□□□□□ -0.46
CRTC3-208ENST00000560098 PXDC1Q5TGL8 231 aa12.15□□□□□ -0.46
CRTC3-208ENST00000560098 LCN15Q6UWW0 184 aa12.15□□□□□ -0.46
CRTC3-208ENST00000560098 TMEM263Q8WUH6 116 aaKnown RBP12.15□□□□□ -0.46
CRTC3-208ENST00000560098 ZNF331Q9NQX6 463 aaPredicted RBP12.15□□□□□ -0.46
CRTC3-208ENST00000560098 FLVCR2Q9UPI3 526 aa12.15□□□□□ -0.46
CRTC3-208ENST00000560098 SCGB1D2O95969 90 aa12.14□□□□□ -0.47
CRTC3-208ENST00000560098 INPP1P49441 399 aa12.14□□□□□ -0.47
CRTC3-208ENST00000560098 LINC00305Q7Z4B0 112 aa12.14□□□□□ -0.47
CRTC3-208ENST00000560098 ZNF546Q86UE3 836 aa12.14□□□□□ -0.47
CRTC3-208ENST00000560098 SLC50A1Q9BRV3 221 aa12.14□□□□□ -0.47
CRTC3-208ENST00000560098 SRRQ9GZT4 340 aa12.14□□□□□ -0.47
CRTC3-208ENST00000560098 CCDC160A6NGH7 325 aa12.13□□□□□ -0.47
CRTC3-208ENST00000560098 GOSR2O14653 212 aa12.13□□□□□ -0.47
CRTC3-208ENST00000560098 TSC22D2O75157 780 aa12.13□□□□□ -0.47
CRTC3-208ENST00000560098 TAS2R30P59541 319 aa12.13□□□□□ -0.47
CRTC3-208ENST00000560098 SPANXN2Q5MJ10 180 aa12.13□□□□□ -0.47
CRTC3-208ENST00000560098 SSX7Q7RTT5 188 aa12.13□□□□□ -0.47
CRTC3-208ENST00000560098 OR10J6PQ8NGY7 276 aa12.13□□□□□ -0.47
CRTC3-208ENST00000560098 C20orf144Q9BQM9 153 aa12.13□□□□□ -0.47
CRTC3-208ENST00000560098 CDK2AP2O75956 126 aa12.12□□□□□ -0.47
CRTC3-208ENST00000560098 SNRPCP09234 159 aaKnown RBP12.12□□□□□ -0.47
CRTC3-208ENST00000560098 KIR3DS1Q14943 382 aa12.12□□□□□ -0.47
CRTC3-208ENST00000560098 BAK1Q16611 211 aa12.12□□□□□ -0.47
CRTC3-208ENST00000560098 IAH1Q2TAA2 248 aaPredicted RBP12.12□□□□□ -0.47
CRTC3-208ENST00000560098 C4orf46Q504U0 113 aa12.12□□□□□ -0.47
CRTC3-208ENST00000560098 BPIFA4PQ86YQ2 179 aa12.12□□□□□ -0.47
CRTC3-208ENST00000560098 GGACTQ9BVM4 153 aa12.12□□□□□ -0.47
CRTC3-208ENST00000560098 AGPAT2O15120 278 aa12.11□□□□□ -0.47
CRTC3-208ENST00000560098 ARL16Q0P5N6 197 aa12.11□□□□□ -0.47
CRTC3-208ENST00000560098 OR5I1Q13606 314 aa12.11□□□□□ -0.47
CRTC3-208ENST00000560098 TRIQKQ629K1 86 aa12.11□□□□□ -0.47
CRTC3-208ENST00000560098 GNPNAT1Q96EK6 184 aaPredicted RBP12.11□□□□□ -0.47
CRTC3-208ENST00000560098 RCL1Q9Y2P8 373 aaKnown RBP12.11□□□□□ -0.47
CRTC3-208ENST00000560098 COX7A2P2O60397 106 aa12.11□□□□□ -0.47
CRTC3-208ENST00000560098 GFI1BQ5VTD9 330 aa12.11□□□□□ -0.47
CRTC3-208ENST00000560098 CCDC28AQ8IWP9 274 aa12.11□□□□□ -0.47
CRTC3-208ENST00000560098 LINC00612Q8N6U2 182 aa12.11□□□□□ -0.47
CRTC3-208ENST00000560098 ZBTB8BQ8NAP8 495 aaPredicted RBP12.11□□□□□ -0.47
CRTC3-208ENST00000560098 TMEM37Q8WXS4 190 aa12.11□□□□□ -0.47
CRTC3-208ENST00000560098 PARD6GQ9BYG4 376 aaPredicted RBP12.11□□□□□ -0.47
CRTC3-208ENST00000560098 Q9H8V8 135 aa12.11□□□□□ -0.47
CRTC3-208ENST00000560098 GSKIPQ9P0R6 139 aa12.11□□□□□ -0.47
CRTC3-208ENST00000560098 TRAV26-1A0A087WT03 109 aa12.1□□□□□ -0.47
CRTC3-208ENST00000560098 C7orf66A4D0T2 115 aa12.1□□□□□ -0.47
CRTC3-208ENST00000560098 PRAC2D3DTV9 90 aa12.1□□□□□ -0.47
CRTC3-208ENST00000560098 SLC17A3O00476 420 aa12.1□□□□□ -0.47
CRTC3-208ENST00000560098 M6PRP20645 277 aa12.1□□□□□ -0.47
CRTC3-208ENST00000560098 RXFP4Q8TDU9 374 aa12.1□□□□□ -0.47
CRTC3-208ENST00000560098 ZNF503Q96F45 646 aa12.1□□□□□ -0.47
CRTC3-208ENST00000560098 MGST2Q99735 147 aa12.1□□□□□ -0.47
CRTC3-208ENST00000560098 LINC00854A0A1B0GVQ3 168 aa12.09□□□□□ -0.47
CRTC3-208ENST00000560098 H3BTX0 84 aa12.09□□□□□ -0.47
CRTC3-208ENST00000560098 ZNF701M0R085 212 aaPredicted RBP12.09□□□□□ -0.47
CRTC3-208ENST00000560098 IGLC2P0DOY2 106 aa12.09□□□□□ -0.47
CRTC3-208ENST00000560098 OPCMLQ14982 345 aa12.09□□□□□ -0.47
CRTC3-208ENST00000560098 MORN5Q5VZ52 161 aa12.09□□□□□ -0.47
CRTC3-208ENST00000560098 C10orf113Q5VZT2 155 aa12.09□□□□□ -0.47
CRTC3-208ENST00000560098 MITD1Q8WV92 249 aa12.09□□□□□ -0.47
CRTC3-208ENST00000560098 PXMP4Q9Y6I8 212 aa12.09□□□□□ -0.47
CRTC3-208ENST00000560098 GAGE12BA1L429 117 aa12.08□□□□□ -0.48
CRTC3-208ENST00000560098 CENPXA8MT69 81 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms