RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 LYRM9A8MSI8 78 aa8.18□□□□□ -1.1
USP3-214ENST00000559718 BOLA2-SMG1P6H3BVE0 249 aa8.18□□□□□ -1.1
USP3-214ENST00000559718 PAX4O43316 350 aa8.18□□□□□ -1.1
USP3-214ENST00000559718 HYPMO75409 117 aa8.18□□□□□ -1.1
USP3-214ENST00000559718 METTL15P1P0C7V9 234 aa8.18□□□□□ -1.1
USP3-214ENST00000559718 RPL7P18124 248 aaKnown RBP8.18□□□□□ -1.1
USP3-214ENST00000559718 CXCL3P19876 107 aa8.18□□□□□ -1.1
USP3-214ENST00000559718 PLP1P60201 277 aa8.18□□□□□ -1.1
USP3-214ENST00000559718 RAP2BP61225 183 aa8.18□□□□□ -1.1
USP3-214ENST00000559718 HIST1H1AQ02539 215 aaPredicted RBP8.18□□□□□ -1.1
USP3-214ENST00000559718 BAK1Q16611 211 aa8.18□□□□□ -1.1
USP3-214ENST00000559718 PATE2Q6UY27 113 aa8.18□□□□□ -1.1
USP3-214ENST00000559718 DEDD2Q8WXF8 326 aa8.18□□□□□ -1.1
USP3-214ENST00000559718 RYR1P21817 5038 aa8.17□□□□□ -1.1
USP3-214ENST00000559718 LINC00854A0A1B0GVQ3 168 aa8.17□□□□□ -1.1
USP3-214ENST00000559718 F5H768 121 aa8.17□□□□□ -1.1
USP3-214ENST00000559718 NDUFB6O95139 128 aa8.17□□□□□ -1.1
USP3-214ENST00000559718 SNRPCP09234 159 aaKnown RBP8.17□□□□□ -1.1
USP3-214ENST00000559718 S100A7P31151 101 aa8.17□□□□□ -1.1
USP3-214ENST00000559718 UBE2MP61081 183 aaKnown RBP8.17□□□□□ -1.1
USP3-214ENST00000559718 RHOBP62745 196 aa8.17□□□□□ -1.1
USP3-214ENST00000559718 SLC38A11Q08AI6 406 aa8.17□□□□□ -1.1
USP3-214ENST00000559718 C1orf134Q5TEV5 83 aa8.17□□□□□ -1.1
USP3-214ENST00000559718 TMEM14EPQ6UXP3 125 aa8.17□□□□□ -1.1
USP3-214ENST00000559718 C15orf53Q8NAA6 179 aa8.17□□□□□ -1.1
USP3-214ENST00000559718 OR8A1Q8NGG7 326 aa8.17□□□□□ -1.1
USP3-214ENST00000559718 SMIM8Q96KF7 97 aa8.17□□□□□ -1.1
USP3-214ENST00000559718 LINC01587Q99440 93 aa8.17□□□□□ -1.1
USP3-214ENST00000559718 A0A087X0K7 114 aa8.16□□□□□ -1.1
USP3-214ENST00000559718 MRPS12O15235 138 aaKnown RBP8.16□□□□□ -1.1
USP3-214ENST00000559718 SCGB1D2O95969 90 aa8.16□□□□□ -1.1
USP3-214ENST00000559718 OR4E1P0C645 316 aa8.16□□□□□ -1.1
USP3-214ENST00000559718 HTN1P15515 57 aa8.16□□□□□ -1.1
USP3-214ENST00000559718 ANXA7P20073 488 aaKnown RBP8.16□□□□□ -1.1
USP3-214ENST00000559718 TSPOP30536 169 aa8.16□□□□□ -1.1
USP3-214ENST00000559718 DLK1P80370 383 aa8.16□□□□□ -1.1
USP3-214ENST00000559718 ARL16Q0P5N6 197 aa8.16□□□□□ -1.1
USP3-214ENST00000559718 PSG3Q16557 428 aa8.16□□□□□ -1.1
USP3-214ENST00000559718 ARL6Q9H0F7 186 aa8.16□□□□□ -1.1
USP3-214ENST00000559718 RBM38Q9H0Z9 239 aaKnown RBP8.16□□□□□ -1.1
USP3-214ENST00000559718 EREGO14944 169 aa8.15□□□□□ -1.1
USP3-214ENST00000559718 NUDT3O95989 172 aa8.15□□□□□ -1.1
USP3-214ENST00000559718 BTCP35070 178 aa8.15□□□□□ -1.1
USP3-214ENST00000559718 TAS2R60P59551 318 aa8.15□□□□□ -1.1
USP3-214ENST00000559718 B2MP61769 119 aa8.15□□□□□ -1.1
USP3-214ENST00000559718 SELENOTP62341 195 aa8.15□□□□□ -1.1
USP3-214ENST00000559718 KIR3DS1Q14943 382 aa8.15□□□□□ -1.1
USP3-214ENST00000559718 IAH1Q2TAA2 248 aaPredicted RBP8.15□□□□□ -1.1
USP3-214ENST00000559718 SOHLH1Q5JUK2 328 aa8.15□□□□□ -1.1
USP3-214ENST00000559718 SPANXN2Q5MJ10 180 aa8.15□□□□□ -1.1
USP3-214ENST00000559718 OR10P1Q8NGE3 313 aa8.15□□□□□ -1.1
USP3-214ENST00000559718 ZNRF2Q8NHG8 242 aa8.15□□□□□ -1.1
USP3-214ENST00000559718 LRRC20Q8TCA0 184 aa8.15□□□□□ -1.1
USP3-214ENST00000559718 RPUSD4Q96CM3 377 aaKnown RBP8.15□□□□□ -1.1
USP3-214ENST00000559718 SDHCQ99643 169 aaPredicted RBP8.15□□□□□ -1.1
USP3-214ENST00000559718 ATG101Q9BSB4 218 aa8.15□□□□□ -1.1
USP3-214ENST00000559718 PARD6GQ9BYG4 376 aaPredicted RBP8.15□□□□□ -1.1
USP3-214ENST00000559718 KRTAP4-5Q9BYR2 181 aa8.15□□□□□ -1.1
USP3-214ENST00000559718 ARV1Q9H2C2 271 aa8.15□□□□□ -1.1
USP3-214ENST00000559718 NPVFQ9HCQ7 196 aa8.15□□□□□ -1.1
USP3-214ENST00000559718 PPP1R14DQ9NXH3 145 aa8.15□□□□□ -1.1
USP3-214ENST00000559718 RCL1Q9Y2P8 373 aaKnown RBP8.15□□□□□ -1.1
USP3-214ENST00000559718 H3BTX0 84 aa8.14□□□□□ -1.11
USP3-214ENST00000559718 K7EPK0 472 aa8.14□□□□□ -1.11
USP3-214ENST00000559718 INPP1P49441 399 aa8.14□□□□□ -1.11
USP3-214ENST00000559718 C4orf46Q504U0 113 aa8.14□□□□□ -1.11
USP3-214ENST00000559718 MORN5Q5VZ52 161 aa8.14□□□□□ -1.11
USP3-214ENST00000559718 TRIQKQ629K1 86 aa8.14□□□□□ -1.11
USP3-214ENST00000559718 TEPPQ6URK8 271 aa8.14□□□□□ -1.11
USP3-214ENST00000559718 ZBTB8BQ8NAP8 495 aaPredicted RBP8.14□□□□□ -1.11
USP3-214ENST00000559718 NOP10Q9NPE3 64 aaKnown RBP8.14□□□□□ -1.11
USP3-214ENST00000559718 ZNF331Q9NQX6 463 aaPredicted RBP8.14□□□□□ -1.11
USP3-214ENST00000559718 GSKIPQ9P0R6 139 aa8.14□□□□□ -1.11
USP3-214ENST00000559718 ABCA13Q86UQ4 5058 aa8.13□□□□□ -1.11
USP3-214ENST00000559718 NAP1L6A6NFF2 107 aa8.13□□□□□ -1.11
USP3-214ENST00000559718 CBY3A6NI87 242 aa8.13□□□□□ -1.11
USP3-214ENST00000559718 PRAC2D3DTV9 90 aa8.13□□□□□ -1.11
USP3-214ENST00000559718 FNDC10F2Z333 226 aa8.13□□□□□ -1.11
USP3-214ENST00000559718 SLC17A3O00476 420 aa8.13□□□□□ -1.11
USP3-214ENST00000559718 AGPAT2O15120 278 aa8.13□□□□□ -1.11
USP3-214ENST00000559718 ATP5G1P05496 136 aa8.13□□□□□ -1.11
USP3-214ENST00000559718 CDKN1BP46527 198 aa8.13□□□□□ -1.11
USP3-214ENST00000559718 ATP5G3P48201 142 aa8.13□□□□□ -1.11
USP3-214ENST00000559718 FAM3BP58499 235 aaPredicted RBP8.13□□□□□ -1.11
USP3-214ENST00000559718 LINC00305Q7Z4B0 112 aa8.13□□□□□ -1.11
USP3-214ENST00000559718 KRTAP19-1Q8IUB9 90 aa8.13□□□□□ -1.11
USP3-214ENST00000559718 TMEM256Q8N2U0 113 aa8.13□□□□□ -1.11
USP3-214ENST00000559718 RNASE8Q8TDE3 154 aaKnown RBP8.13□□□□□ -1.11
USP3-214ENST00000559718 RNF141Q8WVD5 230 aa8.13□□□□□ -1.11
USP3-214ENST00000559718 C16orf74Q96GX8 76 aa8.13□□□□□ -1.11
USP3-214ENST00000559718 MGAT4CQ9UBM8 478 aa8.13□□□□□ -1.11
USP3-214ENST00000559718 LINC00588Q9Y4M8 146 aa8.13□□□□□ -1.11
USP3-214ENST00000559718 NBDYA0A0U1RRE5 68 aa8.12□□□□□ -1.11
USP3-214ENST00000559718 C7orf66A4D0T2 115 aa8.12□□□□□ -1.11
USP3-214ENST00000559718 CCSO14618 274 aa8.12□□□□□ -1.11
USP3-214ENST00000559718 GOSR2O14653 212 aa8.12□□□□□ -1.11
USP3-214ENST00000559718 TSC22D2O75157 780 aa8.12□□□□□ -1.11
USP3-214ENST00000559718 MBPP02686 304 aaPredicted RBP8.12□□□□□ -1.11
USP3-214ENST00000559718 TAS2R30P59541 319 aa8.12□□□□□ -1.11
USP3-214ENST00000559718 MITD1Q8WV92 249 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms