RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 PPTC7Q8NI37 304 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 ITFG2Q969R8 447 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 MALSU1Q96EH3 234 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 RMND5BQ96G75 393 aaPredicted RBP-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 LINC00208Q96KT6 92 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 CARD19Q96LW7 228 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 OR52E6Q96RD3 313 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 TP53RKQ96S44 253 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 CHMP4BQ9H444 224 aaKnown RBP-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 PROK2Q9HC23 129 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 OPTCQ9UBM4 332 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 OR52A1Q9UKL2 312 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 LSM5Q9Y4Y9 91 aaKnown RBP-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 NUP210Q8TEM1 1887 aaPredicted RBP-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 PIK3C2GO75747 1445 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 C9orf84Q5VXU9 1444 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 TNS3Q68CZ2 1445 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 ADGRL3Q9HAR2 1447 aa-0.21□□□□□ -2.44
FOXN3-216ENST00000557496 PTPN13Q12923 2485 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 KIAA0100Q14667 2235 aaKnown RBP-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 USF3Q68DE3 2245 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 HELZP42694 1942 aaKnown RBP-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 MYH9P35579 1960 aaKnown RBP-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 IGLV3-32A0A0A0MS00 114 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 A0A0A6YYH2 397 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 A0A1B0GV50 99 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 LOC101927531A0A1B0GV80 90 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 ODAMA1E959 279 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 A6NJ64 397 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 A8MWV9 139 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 M0R233 179 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 DCTN3O75935 186 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 C8GP07360 202 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 SERPINA6P08185 405 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 RPS17P08708 135 aaKnown RBP-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 RBP1P09455 135 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 OCM2P0CE71 109 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 PDE6GP18545 87 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 SULT1A1P50225 295 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 DYNLT3P51808 116 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 AP2S1P53680 142 aaPredicted RBP-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 ARPP19P56211 112 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 PIGPP57054 158 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 YPEL3P61236 119 aaPredicted RBP-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 RPL37P61927 97 aaKnown RBP-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 RHOBP62745 196 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 EIF5AP63241 154 aaKnown RBP-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 CDK6Q00534 326 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 AESQ08117 197 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 MIR22HGQ0VDD5 57 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 TMED1Q13445 227 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 KRR1Q13601 381 aaKnown RBP-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 MSMO1Q15800 293 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 HIST3H3Q16695 136 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 IMPG1Q17R60 797 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 IAH1Q2TAA2 248 aaPredicted RBP-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 OGFRL1Q5TC84 451 aaPredicted RBP-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 C22orf39Q6P5X5 142 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 CSAG1Q6PB30 78 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 C10orf99Q6UWK7 81 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 C4orf22Q6V702 233 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 Q6ZQY7 126 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 S100A7AQ86SG5 101 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 ANGPTL5Q86XS5 388 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 FAM9CQ8IZT9 166 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 OR5AS1Q8N127 324 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 KRT222Q8N1A0 295 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 LINC00269Q8N2A0 174 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 PXT1Q8NFP0 134 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 TEX47Q8TBZ9 253 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 CT55Q8WUE5 264 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 C4orf3Q8WVX3 66 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 CHCHD1Q96BP2 118 aaKnown RBP-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 C2orf50Q96LR7 162 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 HYLS1Q96M11 299 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 SLC25A21Q9BQT8 299 aaPredicted RBP-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 NPCDR1Q9BY65 106 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 CCDC90BQ9GZT6 254 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 PBOV1Q9GZY1 135 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 DRC3Q9H069 523 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 RNF122Q9H9V4 155 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 NHP2Q9NX24 153 aaKnown RBP-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 MED29Q9NX70 200 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 TVP23BQ9NYZ1 205 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 GLTPQ9NZD2 209 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 VPS29Q9UBQ0 182 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 RNF11Q9Y3C5 154 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 FAT1Q14517 4588 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 USP54Q70EL1 1684 aa-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 TNS1Q9HBL0 1735 aaKnown RBP-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.22□□□□□ -2.44
FOXN3-216ENST00000557496 MAP3K5Q99683 1374 aa-0.22□□□□□ -2.45
FOXN3-216ENST00000557496 KMT2CQ8NEZ4 4911 aaKnown RBP-0.22□□□□□ -2.45
FOXN3-216ENST00000557496 DLEC1Q9Y238 1755 aa-0.22□□□□□ -2.45
FOXN3-216ENST00000557496 SETXQ7Z333 2677 aaKnown RBP-0.22□□□□□ -2.45
FOXN3-216ENST00000557496 PLXNA2O75051 1894 aa-0.22□□□□□ -2.45
FOXN3-216ENST00000557496 FER1L6Q2WGJ9 1857 aa-0.22□□□□□ -2.45
FOXN3-216ENST00000557496 HERC1Q15751 4861 aa-0.22□□□□□ -2.45
FOXN3-216ENST00000557496 NF1P21359 2839 aa-0.23□□□□□ -2.45
FOXN3-216ENST00000557496 ACANP16112 2415 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms