RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 GBGT1Q8N5D6 347 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 SUN5Q8TC36 379 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 DCANP1Q8TF63 244 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 SFT2D1Q8WV19 159 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 FXYD5Q96DB9 178 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 C17orf77Q96MU5 243 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 TMEM167BQ9NRX6 74 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 ZNF586Q9NXT0 402 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 ZNF256Q9Y2P7 627 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-221ENST00000555773 SELENOKQ9Y6D0 94 aa9.35□□□□□ -0.91
SHMT2-221ENST00000555773 TRBV19A0A075B6N1 114 aa9.34□□□□□ -0.91
SHMT2-221ENST00000555773 MAP1LC3B2A6NCE7 125 aa9.34□□□□□ -0.91
SHMT2-221ENST00000555773 ZNF705EA8MWA4 302 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-221ENST00000555773 G3V4G9 280 aa9.34□□□□□ -0.91
SHMT2-221ENST00000555773 ISLRO14498 428 aa9.34□□□□□ -0.91
SHMT2-221ENST00000555773 HMGB3O15347 200 aaKnown RBP9.34□□□□□ -0.91
SHMT2-221ENST00000555773 HBE1P02100 147 aa9.34□□□□□ -0.91
SHMT2-221ENST00000555773 ARL14EPLP0DKL9 152 aa9.34□□□□□ -0.91
SHMT2-221ENST00000555773 PYYP10082 97 aa9.34□□□□□ -0.91
SHMT2-221ENST00000555773 GCHFRP30047 84 aa9.34□□□□□ -0.91
SHMT2-221ENST00000555773 SNRPD3P62318 126 aaKnown RBP9.34□□□□□ -0.91
SHMT2-221ENST00000555773 UBE2L3P68036 154 aaKnown RBP9.34□□□□□ -0.91
SHMT2-221ENST00000555773 PSG9Q00887 426 aa9.34□□□□□ -0.91
SHMT2-221ENST00000555773 SSX7Q7RTT5 188 aa9.34□□□□□ -0.91
SHMT2-221ENST00000555773 WFDC3Q8IUB2 231 aa9.34□□□□□ -0.91
SHMT2-221ENST00000555773 LYPD1Q8N2G4 141 aa9.34□□□□□ -0.91
SHMT2-221ENST00000555773 C16orf92Q96LL3 132 aa9.34□□□□□ -0.91
SHMT2-221ENST00000555773 FAM110AQ9BQ89 295 aa9.34□□□□□ -0.91
SHMT2-221ENST00000555773 SLC50A1Q9BRV3 221 aa9.34□□□□□ -0.91
SHMT2-221ENST00000555773 MAP1LC3BQ9GZQ8 125 aa9.34□□□□□ -0.91
SHMT2-221ENST00000555773 UBQLN2Q9UHD9 624 aa9.34□□□□□ -0.91
SHMT2-221ENST00000555773 SOCS3O14543 225 aa9.33□□□□□ -0.92
SHMT2-221ENST00000555773 EIF3GO75821 320 aaKnown RBP eCLIP9.33□□□□□ -0.92
SHMT2-221ENST00000555773 OR10J4P0C629 311 aa9.33□□□□□ -0.92
SHMT2-221ENST00000555773 TFPI2P48307 235 aa9.33□□□□□ -0.92
SHMT2-221ENST00000555773 PSMB3P49720 205 aa9.33□□□□□ -0.92
SHMT2-221ENST00000555773 ZNF331Q9NQX6 463 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-221ENST00000555773 SORL1Q92673 2214 aa9.32□□□□□ -0.92
SHMT2-221ENST00000555773 PPT1P50897 306 aa9.32□□□□□ -0.92
SHMT2-221ENST00000555773 PMS2P11Q13670 270 aa9.32□□□□□ -0.92
SHMT2-221ENST00000555773 KPRPQ5T749 579 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-221ENST00000555773 GTSCR1Q86UQ5 136 aa9.32□□□□□ -0.92
SHMT2-221ENST00000555773 BLNKQ8WV28 456 aa9.32□□□□□ -0.92
SHMT2-221ENST00000555773 NDUFB4O95168 129 aa9.31□□□□□ -0.92
SHMT2-221ENST00000555773 SNRPCP09234 159 aaKnown RBP9.31□□□□□ -0.92
SHMT2-221ENST00000555773 FGF8P55075 233 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-221ENST00000555773 KRTAP10-11P60412 298 aa9.31□□□□□ -0.92
SHMT2-221ENST00000555773 ZNF767PQ75MW2 155 aa9.31□□□□□ -0.92
SHMT2-221ENST00000555773 IQCF2Q8IXL9 164 aa9.31□□□□□ -0.92
SHMT2-221ENST00000555773 NKX6-2Q9C056 277 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-221ENST00000555773 AAMDCQ9H7C9 122 aa9.31□□□□□ -0.92
SHMT2-221ENST00000555773 PRELID1Q9Y255 219 aa9.31□□□□□ -0.92
SHMT2-221ENST00000555773 CMYA5Q8N3K9 4069 aa9.3□□□□□ -0.92
SHMT2-221ENST00000555773 TRAV8-2A0A0B4J237 113 aa9.3□□□□□ -0.92
SHMT2-221ENST00000555773 A0A1W2PRE2 83 aa9.3□□□□□ -0.92
SHMT2-221ENST00000555773 H3BTX0 84 aa9.3□□□□□ -0.92
SHMT2-221ENST00000555773 RANP62826 216 aaKnown RBP9.3□□□□□ -0.92
SHMT2-221ENST00000555773 PSG3Q16557 428 aa9.3□□□□□ -0.92
SHMT2-221ENST00000555773 ARL6IP6Q8N6S5 226 aa9.3□□□□□ -0.92
SHMT2-221ENST00000555773 LYPD6BQ8NI32 183 aa9.3□□□□□ -0.92
SHMT2-221ENST00000555773 TMPRSS5Q9H3S3 457 aa9.3□□□□□ -0.92
SHMT2-221ENST00000555773 OTORQ9NRC9 128 aa9.3□□□□□ -0.92
SHMT2-221ENST00000555773 ARL2-SNX15V9GYD0 113 aa9.3□□□□□ -0.92
SHMT2-221ENST00000555773 OR11H12B2RN74 326 aa9.29□□□□□ -0.92
SHMT2-221ENST00000555773 SLC17A3O00476 420 aa9.29□□□□□ -0.92
SHMT2-221ENST00000555773 CD7P09564 240 aa9.29□□□□□ -0.92
SHMT2-221ENST00000555773 ZNF688P0C7X2 276 aa9.29□□□□□ -0.92
SHMT2-221ENST00000555773 CD81P60033 236 aa9.29□□□□□ -0.92
SHMT2-221ENST00000555773 RAB14P61106 215 aa9.29□□□□□ -0.92
SHMT2-221ENST00000555773 CCL20P78556 96 aa9.29□□□□□ -0.92
SHMT2-221ENST00000555773 IFITM2Q01629 132 aa9.29□□□□□ -0.92
SHMT2-221ENST00000555773 FAM24BQ8N5W8 94 aa9.29□□□□□ -0.92
SHMT2-221ENST00000555773 RXFP4Q8TDU9 374 aa9.29□□□□□ -0.92
SHMT2-221ENST00000555773 MRPL53Q96EL3 112 aaKnown RBP9.29□□□□□ -0.92
SHMT2-221ENST00000555773 LINC00052Q96N35 136 aa9.29□□□□□ -0.92
SHMT2-221ENST00000555773 PGPA6NDG6 321 aa9.28□□□□□ -0.92
SHMT2-221ENST00000555773 DEFB131AP59861 70 aa9.28□□□□□ -0.92
SHMT2-221ENST00000555773 ODF3L2Q3SX64 289 aa9.28□□□□□ -0.92
SHMT2-221ENST00000555773 PSMG4Q5JS54 123 aa9.28□□□□□ -0.92
SHMT2-221ENST00000555773 Q8N1Y9 231 aa9.28□□□□□ -0.92
SHMT2-221ENST00000555773 Q9H3A6 140 aa9.28□□□□□ -0.92
SHMT2-221ENST00000555773 MAP6D1Q9H9H5 199 aa9.28□□□□□ -0.92
SHMT2-221ENST00000555773 C19orf73Q9NVV2 129 aa9.28□□□□□ -0.92
SHMT2-221ENST00000555773 NOTCH1P46531 2555 aa9.28□□□□□ -0.92
SHMT2-221ENST00000555773 NBEAL1Q6ZS30 2694 aa9.27□□□□□ -0.93
SHMT2-221ENST00000555773 A0A1B0GV50 99 aa9.27□□□□□ -0.93
SHMT2-221ENST00000555773 IFNA1P01562 189 aa9.27□□□□□ -0.93
SHMT2-221ENST00000555773 TAGLN2P37802 199 aaKnown RBP9.27□□□□□ -0.93
SHMT2-221ENST00000555773 CSN1S1P47710 185 aa9.27□□□□□ -0.93
SHMT2-221ENST00000555773 SUMO1P63165 101 aaKnown RBP9.27□□□□□ -0.93
SHMT2-221ENST00000555773 ICAM4Q14773 271 aa9.27□□□□□ -0.93
SHMT2-221ENST00000555773 IGFL4Q6B9Z1 124 aa9.27□□□□□ -0.93
SHMT2-221ENST00000555773 EXOC3-AS1Q8N2X6 119 aa9.27□□□□□ -0.93
SHMT2-221ENST00000555773 RNF182Q8N6D2 247 aa9.27□□□□□ -0.93
SHMT2-221ENST00000555773 ZNF738Q8NE65 137 aa9.27□□□□□ -0.93
SHMT2-221ENST00000555773 RPUSD4Q96CM3 377 aaKnown RBP9.27□□□□□ -0.93
SHMT2-221ENST00000555773 C20orf173Q96LM9 149 aa9.27□□□□□ -0.93
SHMT2-221ENST00000555773 PRR25Q96S07 402 aa9.27□□□□□ -0.93
SHMT2-221ENST00000555773 TXNDC17Q9BRA2 123 aa9.27□□□□□ -0.93
SHMT2-221ENST00000555773 MANBALQ9NQG1 85 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms