RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 LINC00205P59089 165 aa11.35□□□□□ -0.59
VTI1B-204ENST00000554659 LINC00477Q96M19 166 aa11.35□□□□□ -0.59
VTI1B-204ENST00000554659 C9JAW5 83 aa11.35□□□□□ -0.59
VTI1B-204ENST00000554659 TMEM158Q8WZ71 300 aa11.35□□□□□ -0.59
VTI1B-204ENST00000554659 VWC2LB2RUY7 222 aa11.34□□□□□ -0.59
VTI1B-204ENST00000554659 IGHG3P01860 377 aa11.34□□□□□ -0.59
VTI1B-204ENST00000554659 GAGE2AQ6NT46 116 aa11.34□□□□□ -0.59
VTI1B-204ENST00000554659 VGLL1Q99990 258 aa11.34□□□□□ -0.59
VTI1B-204ENST00000554659 POLR3KQ9Y2Y1 108 aaPredicted RBP11.34□□□□□ -0.59
VTI1B-204ENST00000554659 ZNF492Q9P255 531 aa11.34□□□□□ -0.59
VTI1B-204ENST00000554659 TRAV40A0A0B4J280 105 aa11.34□□□□□ -0.59
VTI1B-204ENST00000554659 Q8TAT8 98 aa11.34□□□□□ -0.59
VTI1B-204ENST00000554659 CHAC1Q9BUX1 264 aa11.34□□□□□ -0.59
VTI1B-204ENST00000554659 COX11Q9Y6N1 276 aa11.34□□□□□ -0.59
VTI1B-204ENST00000554659 PDE6HQ13956 83 aa11.33□□□□□ -0.6
VTI1B-204ENST00000554659 RASL10AQ92737 203 aa11.33□□□□□ -0.6
VTI1B-204ENST00000554659 FAM231BA6NCW3 169 aa11.33□□□□□ -0.6
VTI1B-204ENST00000554659 LCNL1Q6ZST4 164 aa11.33□□□□□ -0.6
VTI1B-204ENST00000554659 RCHY1Q96PM5 261 aa11.33□□□□□ -0.6
VTI1B-204ENST00000554659 NOTCH3Q9UM47 2321 aa11.33□□□□□ -0.6
VTI1B-204ENST00000554659 SRRM4A7MD48 611 aaKnown RBP11.33□□□□□ -0.6
VTI1B-204ENST00000554659 VCYO14598 125 aa11.33□□□□□ -0.6
VTI1B-204ENST00000554659 PAX9P55771 341 aa11.33□□□□□ -0.6
VTI1B-204ENST00000554659 SCN5AQ14524 2016 aa11.33□□□□□ -0.6
VTI1B-204ENST00000554659 TP53BP1Q12888 1972 aaPredicted RBP11.33□□□□□ -0.6
VTI1B-204ENST00000554659 LMO1P25800 156 aa11.33□□□□□ -0.6
VTI1B-204ENST00000554659 HS3ST6Q96QI5 342 aa11.33□□□□□ -0.6
VTI1B-204ENST00000554659 SHANK2-AS3Q9BTD1 123 aa11.33□□□□□ -0.6
VTI1B-204ENST00000554659 C11orf44Q8N8P7 122 aa11.32□□□□□ -0.6
VTI1B-204ENST00000554659 SMKR1H3BMG3 65 aa11.32□□□□□ -0.6
VTI1B-204ENST00000554659 CT83Q5H943 113 aa11.32□□□□□ -0.6
VTI1B-204ENST00000554659 CSTL1Q9H114 145 aa11.32□□□□□ -0.6
VTI1B-204ENST00000554659 LIME1Q9H400 295 aa11.32□□□□□ -0.6
VTI1B-204ENST00000554659 IGKV1-16P04430 117 aa11.32□□□□□ -0.6
VTI1B-204ENST00000554659 EFNA4P52798 201 aa11.32□□□□□ -0.6
VTI1B-204ENST00000554659 KLRD1Q13241 179 aa11.32□□□□□ -0.6
VTI1B-204ENST00000554659 DTX2Q86UW9 622 aa11.32□□□□□ -0.6
VTI1B-204ENST00000554659 C14orf178Q8N769 122 aaPredicted RBP11.32□□□□□ -0.6
VTI1B-204ENST00000554659 MPDZO75970 2070 aa11.32□□□□□ -0.6
VTI1B-204ENST00000554659 C1orf159Q96HA4 380 aa11.32□□□□□ -0.6
VTI1B-204ENST00000554659 RSPO3Q9BXY4 272 aaPredicted RBP11.32□□□□□ -0.6
VTI1B-204ENST00000554659 INS-IGF2F8WCM5 200 aa11.31□□□□□ -0.6
VTI1B-204ENST00000554659 INSP01308 110 aa11.31□□□□□ -0.6
VTI1B-204ENST00000554659 RPL36AP83881 106 aaKnown RBP11.31□□□□□ -0.6
VTI1B-204ENST00000554659 AMN1Q8IY45 258 aa11.31□□□□□ -0.6
VTI1B-204ENST00000554659 RPL36ALQ969Q0 106 aaKnown RBP11.31□□□□□ -0.6
VTI1B-204ENST00000554659 TMEM14BQ9NUH8 114 aa11.31□□□□□ -0.6
VTI1B-204ENST00000554659 C6orf226Q5I0X4 101 aa11.31□□□□□ -0.6
VTI1B-204ENST00000554659 STPG4Q8N801 248 aa11.31□□□□□ -0.6
VTI1B-204ENST00000554659 PRADC1Q9BSG0 188 aa11.31□□□□□ -0.6
VTI1B-204ENST00000554659 MLANAQ16655 118 aa11.31□□□□□ -0.6
VTI1B-204ENST00000554659 C9orf153Q5TBE3 101 aa11.31□□□□□ -0.6
VTI1B-204ENST00000554659 C18orf32Q8TCD1 76 aa11.31□□□□□ -0.6
VTI1B-204ENST00000554659 LINC00479Q96M42 142 aa11.31□□□□□ -0.6
VTI1B-204ENST00000554659 SPACA3Q8IXA5 215 aa11.3□□□□□ -0.6
VTI1B-204ENST00000554659 TMEM75Q8N9X5 138 aa11.3□□□□□ -0.6
VTI1B-204ENST00000554659 LEPROTO15243 131 aa11.3□□□□□ -0.6
VTI1B-204ENST00000554659 CITED1Q99966 193 aa11.3□□□□□ -0.6
VTI1B-204ENST00000554659 KLF12Q9Y4X4 402 aa11.3□□□□□ -0.6
VTI1B-204ENST00000554659 CNOT1A5YKK6 2376 aaKnown RBP11.3□□□□□ -0.6
VTI1B-204ENST00000554659 CDK2AP2O75956 126 aa11.3□□□□□ -0.6
VTI1B-204ENST00000554659 IGHV2-5P01817 119 aa11.3□□□□□ -0.6
VTI1B-204ENST00000554659 DNAJC30Q96LL9 226 aa11.3□□□□□ -0.6
VTI1B-204ENST00000554659 PRIMA1Q86XR5 153 aa11.3□□□□□ -0.6
VTI1B-204ENST00000554659 SPXQ9BT56 116 aa11.3□□□□□ -0.6
VTI1B-204ENST00000554659 ROS1P08922 2347 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.29□□□□□ -0.6
VTI1B-204ENST00000554659 ZNF726P1Q15940 193 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 VWA8A3KMH1 1905 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 TRGV1A0A0A0MS02 117 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 MYMXA0A1B0GTQ4 84 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 A0A1W2PPI3 338 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 IGHV3-53P01767 116 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 USMG5Q96IX5 58 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 NCOR1P1Q9H4R4 102 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 WNK2Q9Y3S1 2297 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 TRAV13-1A0A0B4J241 112 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 A0A0G2JNJ9 132 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 FAM223BA6NKX1 122 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 IGHV2-70P01814 119 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 YPEL3P61236 119 aaPredicted RBP11.29□□□□□ -0.6
VTI1B-204ENST00000554659 FAM223AQ8IWN6 122 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 TIMM21Q9BVV7 248 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 Q9UFV3 132 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 DSCR9P59020 149 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 IGFL4Q6B9Z1 124 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 OVOL2Q9BRP0 275 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 ARFGEF3Q5TH69 2177 aa11.29□□□□□ -0.6
VTI1B-204ENST00000554659 ARMS2P0C7Q2 107 aa11.28□□□□□ -0.6
VTI1B-204ENST00000554659 CMC4P56277 68 aaPredicted RBP11.28□□□□□ -0.6
VTI1B-204ENST00000554659 NDPQ00604 133 aa11.28□□□□□ -0.6
VTI1B-204ENST00000554659 TMEM219Q86XT9 240 aa11.28□□□□□ -0.6
VTI1B-204ENST00000554659 RLFQ13129 1914 aa11.28□□□□□ -0.6
VTI1B-204ENST00000554659 F8WEM9 126 aa11.27□□□□□ -0.6
VTI1B-204ENST00000554659 NDUFA4L2Q9NRX3 87 aa11.27□□□□□ -0.6
VTI1B-204ENST00000554659 LYPD2Q6UXB3 125 aa11.27□□□□□ -0.6
VTI1B-204ENST00000554659 FAM231DQ6ZW35 169 aa11.27□□□□□ -0.6
VTI1B-204ENST00000554659 DOCK9Q9BZ29 2069 aa11.27□□□□□ -0.61
VTI1B-204ENST00000554659 SNHG12Q9BXW3 62 aa11.27□□□□□ -0.61
VTI1B-204ENST00000554659 FCN3O75636 299 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms