RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 GNPNAT1Q96EK6 184 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-212ENST00000554486 PSMG3Q9BT73 122 aaPredicted RBP4.76□□□□□ -1.65
SCFD1-212ENST00000554486 SLC39A9Q9NUM3 307 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 TIMM9Q9Y5J7 89 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 PXMP4Q9Y6I8 212 aa4.76□□□□□ -1.65
SCFD1-212ENST00000554486 SORL1Q92673 2214 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 ZNF320A2RRD8 509 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 TMEM213A2RRL7 107 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 C17orf112F2Z3M2 114 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 LGALS9O00182 355 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 HYPMO75409 117 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 IL4P05112 153 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 LYZP61626 148 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 EIF5AP63241 154 aaKnown RBP4.75□□□□□ -1.65
SCFD1-212ENST00000554486 FAM106AQ4KMX7 169 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 GCSAMLQ5JQS6 135 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 IL34Q6ZMJ4 242 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 OR1B1Q8NGR6 318 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 OR2G3Q8NGZ4 309 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 SPATA3Q8NHX4 192 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 TMED6Q8WW62 240 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 TMEM37Q8WXS4 190 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 C20orf24Q9BUV8 137 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 PBDC1Q9BVG4 233 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 VSIRQ9H7M9 311 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 KCNIP2Q9NS61 270 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 MRPL27Q9P0M9 148 aaKnown RBP4.75□□□□□ -1.65
SCFD1-212ENST00000554486 DOK5Q9P104 306 aa4.75□□□□□ -1.65
SCFD1-212ENST00000554486 IGKV2D-30A0A075B6S6 120 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 IGHV3-49A0A0A0MS15 119 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 C2orf70A6NJV1 201 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 A8MWP6 167 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 A8MZ25 164 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 H3BRN7 92 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 K7EMT4 169 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 VCYO14598 125 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 APOHP02749 345 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-212ENST00000554486 OR5G3P0C626 314 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 SEC11BP0C7V7 166 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 ORM2P19652 201 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 M6PRP20645 277 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 CRYBB3P26998 211 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 RAB2AP61019 212 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 SERF2P84101 59 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 ACOT6Q3I5F7 207 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-212ENST00000554486 KRTAP21-3Q3LHN1 58 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 SPATA31B1PQ5VZV4 182 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 ADAMTSL5Q6ZMM2 481 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 OR4F17Q8NGA8 305 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 GATAD1Q8WUU5 269 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 UHRF2Q96PU4 802 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 OR4F4Q96R69 305 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 KRTAP1-5Q9BYS1 174 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 DNAJC4Q9NNZ3 241 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 RPRMQ9NS64 109 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 RABAC1Q9UI14 185 aa4.74□□□□□ -1.65
SCFD1-212ENST00000554486 IGHV3OR16-13A0A075B7E8 117 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 IGHV3-74A0A0B4J1X5 117 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 TRAV5A0A0B4J249 113 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 IGHV7-4-1A0A0J9YVY3 117 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 hDV102S1A0JD36 115 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 SEC14L6B5MCN3 397 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 OVOL1O14753 267 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 CHEK1O14757 476 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 COX7A2P2O60397 106 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 EIF3GO75821 320 aaKnown RBP eCLIP4.73□□□□□ -1.65
SCFD1-212ENST00000554486 CSN3P07498 182 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 C8orf88P0DMB2 117 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 FOLR2P14207 255 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 NPPCP23582 126 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 FHITP49789 147 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 IFITM2Q01629 132 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 ZNF726P1Q15940 193 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 TMEM41BQ5BJD5 291 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 FAM74A1Q5RGS3 127 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 AKR1C8PQ5T2L2 129 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 C10orf113Q5VZT2 155 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 LEMD1Q68G75 181 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 FAM122CQ6P4D5 195 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 ALKAL2Q6UX46 152 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 Q6ZRG5 221 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 MIR17HGQ75NE6 70 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 RPP25LQ8N5L8 163 aaKnown RBP4.73□□□□□ -1.65
SCFD1-212ENST00000554486 OR10G4Q8NGN3 311 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 OR10G9Q8NGN4 311 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 OR10G7Q8NGN6 311 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 OR9G4Q8NGQ1 327 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 OR1L4Q8NGR5 311 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 PHYHIPLQ96FC7 376 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 GRAMD2BQ96HH9 432 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 FAM167A-AS1Q96KT0 104 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 METTL26Q96S19 204 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 SHANK2-AS3Q9BTD1 123 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 SCRT1Q9BWW7 348 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 SLC25A39Q9BZJ4 359 aaPredicted RBP4.73□□□□□ -1.65
SCFD1-212ENST00000554486 DAZ1Q9NQZ3 744 aaKnown RBP4.73□□□□□ -1.65
SCFD1-212ENST00000554486 SMPXQ9UHP9 88 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 HIGD1AQ9Y241 93 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 UFC1Q9Y3C8 167 aa4.73□□□□□ -1.65
SCFD1-212ENST00000554486 IGHV3-66A0A0C4DH42 116 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms