RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 OR1L1Q8NH94 360 aa2.89□□□□□ -1.95
PCNX1-205ENST00000553508 LGALS14Q8TCE9 139 aa2.89□□□□□ -1.95
PCNX1-205ENST00000553508 DNAH3Q8TD57 4116 aa2.89□□□□□ -1.95
PCNX1-205ENST00000553508 APH1BQ8WW43 257 aa2.89□□□□□ -1.95
PCNX1-205ENST00000553508 BAALCQ8WXS3 180 aa2.89□□□□□ -1.95
PCNX1-205ENST00000553508 YPEL2Q96QA6 119 aa2.89□□□□□ -1.95
PCNX1-205ENST00000553508 NABP2Q9BQ15 211 aa2.89□□□□□ -1.95
PCNX1-205ENST00000553508 TM2D3Q9BRN9 247 aa2.89□□□□□ -1.95
PCNX1-205ENST00000553508 UQCC2Q9BRT2 126 aa2.89□□□□□ -1.95
PCNX1-205ENST00000553508 MRPL20Q9BYC9 149 aaKnown RBP2.89□□□□□ -1.95
PCNX1-205ENST00000553508 TOLLIPQ9H0E2 274 aa2.89□□□□□ -1.95
PCNX1-205ENST00000553508 BABAM2Q9NXR7 383 aa2.89□□□□□ -1.95
PCNX1-205ENST00000553508 KMT2CQ8NEZ4 4911 aaKnown RBP2.89□□□□□ -1.95
PCNX1-205ENST00000553508 TNCP24821 2201 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 EFCAB10A6NFE3 127 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 G3V318 75 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 ITGB1BP1O14713 200 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 MYL12BO14950 172 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 OR2A4O95047 310 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 NDUFA3O95167 84 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 IGLV1-51P01701 117 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 IGHV3-11P01762 117 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 CD3GP09693 182 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 ZNF688P0C7X2 276 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 LIMS3P0CW19 117 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 LIMS4P0CW20 117 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 LGALS7P47929 136 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 SERPINB10P48595 397 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 RND2P52198 227 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 GTF2A1P52655 376 aaPredicted RBP2.88□□□□□ -1.95
PCNX1-205ENST00000553508 MRPS15P82914 257 aaKnown RBP2.88□□□□□ -1.95
PCNX1-205ENST00000553508 RTL8BQ17RB0 113 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 ZFAND6Q6FIF0 208 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 MRPL55Q7Z7F7 128 aaKnown RBP2.88□□□□□ -1.95
PCNX1-205ENST00000553508 TMEM256Q8N2U0 113 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 Q8N402 240 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 LINC00469Q8N7U9 141 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 OR2K2Q8NGT1 345 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 GRPEL2Q8TAA5 225 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 DYNLRB2Q8TF09 96 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 PYDC1Q8WXC3 89 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 GHSRQ92847 366 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 PTX4Q96A99 478 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 RDH12Q96NR8 316 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 TMED9Q9BVK6 235 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 FBXL15Q9H469 300 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 C12orf4Q9NQ89 552 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 C8orf4Q9NR00 106 aa2.88□□□□□ -1.95
PCNX1-205ENST00000553508 METTL1Q9UBP6 276 aaKnown RBP2.88□□□□□ -1.95
PCNX1-205ENST00000553508 ZNF230Q9UIE0 474 aaPredicted RBP2.88□□□□□ -1.95
PCNX1-205ENST00000553508 LOC100130705A0A1B0GUX0 176 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 C16orf90A8MZG2 172 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 K7EMT4 169 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 BRI3O95415 125 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 P0C880 135 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 TPBGQ13641 420 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 FXYD3Q14802 87 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 HMGN3Q15651 99 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 MPV17L2Q567V2 206 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 PDPNQ86YL7 162 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 ST20-AS1Q8NBB2 130 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.87□□□□□ -1.95
PCNX1-205ENST00000553508 LFNGQ8NES3 379 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 MRPL30Q8TCC3 161 aaKnown RBP2.87□□□□□ -1.95
PCNX1-205ENST00000553508 USMG5Q96IX5 58 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 SCGB3A2Q96PL1 93 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 PHB2Q99623 299 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 ALX4Q9H161 411 aaPredicted RBP2.87□□□□□ -1.95
PCNX1-205ENST00000553508 BANF2Q9H503 90 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 EDA2RQ9HAV5 297 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 PLEKHJ1Q9NW61 149 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 COA4Q9NYJ1 87 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 NUBP2Q9Y5Y2 271 aa2.87□□□□□ -1.95
PCNX1-205ENST00000553508 TRAV8-7A0A075B6U6 113 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 FAM223BA6NKX1 122 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 M0R1X1 148 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 ARL6IP5O75915 188 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 NAPSAO96009 420 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 DHFRP00374 187 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 CA2P00918 260 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 GCGP01275 180 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 CNTFRP26992 372 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 TAS2R31P59538 309 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 HLA-DRB3P79483 266 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 ST3GAL4Q11206 333 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 SSX1Q16384 188 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 TNXAQ16473 311 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 VMA21Q3ZAQ7 101 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 RPL39P5Q59GN2 51 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 RBM48Q5RL73 367 aaKnown RBP2.86□□□□□ -1.95
PCNX1-205ENST00000553508 CBLN2Q8IUK8 224 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 FAM223AQ8IWN6 122 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 SELENOHQ8IZQ5 122 aaKnown RBP2.86□□□□□ -1.95
PCNX1-205ENST00000553508 PACRGLQ8N7B6 248 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 CASTOR1Q8WTX7 329 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 CYGBQ8WWM9 190 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 ADTRPQ96IZ2 230 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 DERL3Q96Q80 235 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 AGMATQ9BSE5 352 aa2.86□□□□□ -1.95
PCNX1-205ENST00000553508 FAM103A1Q9BTL3 118 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms