RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 CTTNBP2Q8WZ74 1663 aa0.11□□□□□ -2.39
GPN3-209ENST00000551079 TRAV23DV6A0A075B6W5 121 aa0.11□□□□□ -2.39
GPN3-209ENST00000551079 H3BRM9 83 aa0.11□□□□□ -2.39
GPN3-209ENST00000551079 HLA-EP13747 358 aa0.11□□□□□ -2.39
GPN3-209ENST00000551079 TMBIM6P55061 237 aa0.11□□□□□ -2.39
GPN3-209ENST00000551079 HSPE1P61604 102 aaKnown RBP0.11□□□□□ -2.39
GPN3-209ENST00000551079 FADDQ13158 208 aa0.11□□□□□ -2.39
GPN3-209ENST00000551079 SNCBQ16143 134 aa0.11□□□□□ -2.39
GPN3-209ENST00000551079 BCL2L15Q5TBC7 163 aa0.11□□□□□ -2.39
GPN3-209ENST00000551079 PSMF1Q92530 271 aa0.11□□□□□ -2.39
GPN3-209ENST00000551079 CHCHD1Q96BP2 118 aaKnown RBP0.11□□□□□ -2.39
GPN3-209ENST00000551079 MUCL1Q96DR8 90 aa0.11□□□□□ -2.39
GPN3-209ENST00000551079 LYSMD1Q96S90 227 aa0.11□□□□□ -2.39
GPN3-209ENST00000551079 TMEM138Q9NPI0 162 aa0.11□□□□□ -2.39
GPN3-209ENST00000551079 LY96Q9Y6Y9 160 aa0.11□□□□□ -2.39
GPN3-209ENST00000551079 TRPM1Q7Z4N2 1603 aa0.11□□□□□ -2.39
GPN3-209ENST00000551079 SYNE1Q8NF91 8797 aaKnown RBP0.1□□□□□ -2.39
GPN3-209ENST00000551079 NUP210Q8TEM1 1887 aaPredicted RBP0.1□□□□□ -2.39
GPN3-209ENST00000551079 FSIP2Q5CZC0 6907 aa0.1□□□□□ -2.39
GPN3-209ENST00000551079 A0A087WSZ3 146 aa0.1□□□□□ -2.39
GPN3-209ENST00000551079 JMJD7-PLA2G4BH0Y9G9 81 aa0.1□□□□□ -2.39
GPN3-209ENST00000551079 IFNA7P01567 189 aa0.1□□□□□ -2.39
GPN3-209ENST00000551079 REEP5Q00765 189 aa0.1□□□□□ -2.39
GPN3-209ENST00000551079 EIF5AL1Q6IS14 154 aaKnown RBP0.1□□□□□ -2.39
GPN3-209ENST00000551079 OR4K15Q8NH41 348 aa0.1□□□□□ -2.39
GPN3-209ENST00000551079 CANT1Q8WVQ1 401 aa0.1□□□□□ -2.39
GPN3-209ENST00000551079 BTF3L4Q96K17 158 aa0.1□□□□□ -2.39
GPN3-209ENST00000551079 YPEL2Q96QA6 119 aa0.1□□□□□ -2.39
GPN3-209ENST00000551079 GPX7Q96SL4 187 aaPredicted RBP0.1□□□□□ -2.39
GPN3-209ENST00000551079 PAIP2Q9BPZ3 127 aaKnown RBP0.1□□□□□ -2.39
GPN3-209ENST00000551079 FAM103A1Q9BTL3 118 aaKnown RBP0.1□□□□□ -2.39
GPN3-209ENST00000551079 PBOV1Q9GZY1 135 aa0.1□□□□□ -2.39
GPN3-209ENST00000551079 TAF9BQ9HBM6 251 aa0.1□□□□□ -2.39
GPN3-209ENST00000551079 OR52A1Q9UKL2 312 aa0.1□□□□□ -2.39
GPN3-209ENST00000551079 PRNDQ9UKY0 176 aa0.1□□□□□ -2.39
GPN3-209ENST00000551079 ARL2BPQ9Y2Y0 163 aa0.1□□□□□ -2.39
GPN3-209ENST00000551079 RNF11Q9Y3C5 154 aa0.1□□□□□ -2.39
GPN3-209ENST00000551079 ERBINQ96RT1 1412 aa0.1□□□□□ -2.39
GPN3-209ENST00000551079 CACNA1HO95180 2353 aa0.1□□□□□ -2.39
GPN3-209ENST00000551079 CSN2P05814 226 aa0.09□□□□□ -2.4
GPN3-209ENST00000551079 COX7CP15954 63 aa0.09□□□□□ -2.4
GPN3-209ENST00000551079 SPINK7P58062 85 aa0.09□□□□□ -2.4
GPN3-209ENST00000551079 HACD4Q5VWC8 232 aa0.09□□□□□ -2.4
GPN3-209ENST00000551079 DHRS4L2Q6PKH6 230 aa0.09□□□□□ -2.4
GPN3-209ENST00000551079 ZCCHC23Q6ZST2 131 aa0.09□□□□□ -2.4
GPN3-209ENST00000551079 ARPINQ7Z6K5 226 aa0.09□□□□□ -2.4
GPN3-209ENST00000551079 TEN1Q86WV5 123 aa0.09□□□□□ -2.4
GPN3-209ENST00000551079 OR5D16Q8NGK9 328 aa0.09□□□□□ -2.4
GPN3-209ENST00000551079 CARD19Q96LW7 228 aa0.09□□□□□ -2.4
GPN3-209ENST00000551079 HYLS1Q96M11 299 aa0.09□□□□□ -2.4
GPN3-209ENST00000551079 PHB2Q99623 299 aa0.09□□□□□ -2.4
GPN3-209ENST00000551079 IMUPQ9GZP8 106 aa0.09□□□□□ -2.4
GPN3-209ENST00000551079 POPDC3Q9HBV1 291 aa0.09□□□□□ -2.4
GPN3-209ENST00000551079 ARL5AQ9Y689 179 aa0.09□□□□□ -2.4
GPN3-209ENST00000551079 BCORL1Q5H9F3 1711 aa0.09□□□□□ -2.4
GPN3-209ENST00000551079 PTPRZ1P23471 2315 aaPredicted RBP0.08□□□□□ -2.4
GPN3-209ENST00000551079 TPRP12270 2363 aaKnown RBP0.08□□□□□ -2.4
GPN3-209ENST00000551079 CD109Q6YHK3 1445 aa0.08□□□□□ -2.4
GPN3-209ENST00000551079 MED13LQ71F56 2210 aa0.08□□□□□ -2.4
GPN3-209ENST00000551079 MFSD11O43934 449 aa0.08□□□□□ -2.4
GPN3-209ENST00000551079 TRGC2P03986 189 aa0.08□□□□□ -2.4
GPN3-209ENST00000551079 S100A6P06703 90 aa0.08□□□□□ -2.4
GPN3-209ENST00000551079 RAB5CP51148 216 aa0.08□□□□□ -2.4
GPN3-209ENST00000551079 FOXA3P55318 350 aaPredicted RBP0.08□□□□□ -2.4
GPN3-209ENST00000551079 FXYD4P59646 89 aa0.08□□□□□ -2.4
GPN3-209ENST00000551079 SPA17Q15506 151 aa0.08□□□□□ -2.4
GPN3-209ENST00000551079 Q86TA4 180 aa0.08□□□□□ -2.4
GPN3-209ENST00000551079 OR5AS1Q8N127 324 aa0.08□□□□□ -2.4
GPN3-209ENST00000551079 OR10AC1Q8NH08 325 aa0.08□□□□□ -2.4
GPN3-209ENST00000551079 PPTC7Q8NI37 304 aa0.08□□□□□ -2.4
GPN3-209ENST00000551079 ATG2AQ2TAZ0 1938 aa0.08□□□□□ -2.4
GPN3-209ENST00000551079 ESPL1Q14674 2120 aa0.08□□□□□ -2.4
GPN3-209ENST00000551079 DUXBA0A1W2PPF3 345 aa0.07□□□□□ -2.4
GPN3-209ENST00000551079 hDV103S1A0JD37 113 aa0.07□□□□□ -2.4
GPN3-209ENST00000551079 TMEM210A6NLX4 147 aa0.07□□□□□ -2.4
GPN3-209ENST00000551079 C17orf112F2Z3M2 114 aa0.07□□□□□ -2.4
GPN3-209ENST00000551079 RER1O15258 196 aa0.07□□□□□ -2.4
GPN3-209ENST00000551079 GGCTO75223 188 aaKnown RBP0.07□□□□□ -2.4
GPN3-209ENST00000551079 IDO1P14902 403 aa0.07□□□□□ -2.4
GPN3-209ENST00000551079 SPINT3P49223 89 aa0.07□□□□□ -2.4
GPN3-209ENST00000551079 MIR22HGQ0VDD5 57 aa0.07□□□□□ -2.4
GPN3-209ENST00000551079 KLRD1Q13241 179 aa0.07□□□□□ -2.4
GPN3-209ENST00000551079 C6orf52Q5T4I8 152 aa0.07□□□□□ -2.4
GPN3-209ENST00000551079 ATOH7Q8N100 152 aa0.07□□□□□ -2.4
GPN3-209ENST00000551079 SMIM20Q8N5G0 67 aa0.07□□□□□ -2.4
GPN3-209ENST00000551079 PXT1Q8NFP0 134 aa0.07□□□□□ -2.4
GPN3-209ENST00000551079 ZNF431Q8TF32 576 aaPredicted RBP0.07□□□□□ -2.4
GPN3-209ENST00000551079 TEX37Q96LM6 180 aa0.07□□□□□ -2.4
GPN3-209ENST00000551079 ZNF714Q96N38 554 aa0.07□□□□□ -2.4
GPN3-209ENST00000551079 MYH1P12882 1939 aa0.07□□□□□ -2.4
GPN3-209ENST00000551079 KIAA1549LQ6ZVL6 1849 aa0.06□□□□□ -2.4
GPN3-209ENST00000551079 ZFYVE26Q68DK2 2539 aa0.06□□□□□ -2.4
GPN3-209ENST00000551079 G3V2T6 193 aa0.06□□□□□ -2.4
GPN3-209ENST00000551079 E2F6O75461 281 aa0.06□□□□□ -2.4
GPN3-209ENST00000551079 ATG12O94817 140 aa0.06□□□□□ -2.4
GPN3-209ENST00000551079 OR10J4P0C629 311 aa0.06□□□□□ -2.4
GPN3-209ENST00000551079 MYL5Q02045 173 aa0.06□□□□□ -2.4
GPN3-209ENST00000551079 POU6F1Q14863 301 aa0.06□□□□□ -2.4
GPN3-209ENST00000551079 LTC4SQ16873 150 aa0.06□□□□□ -2.4
GPN3-209ENST00000551079 OCIAD2Q56VL3 154 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms