RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 ZC2HC1AQ96GY0 325 aa10.81□□□□□ -0.68
PRPF40B-209ENST00000548825 AAMDCQ9H7C9 122 aa10.81□□□□□ -0.68
PRPF40B-209ENST00000548825 ZNF785A8K8V0 405 aa10.8□□□□□ -0.68
PRPF40B-209ENST00000548825 EPG5Q9HCE0 2579 aa10.8□□□□□ -0.68
PRPF40B-209ENST00000548825 CFAP46Q8IYW2 2715 aa10.8□□□□□ -0.68
PRPF40B-209ENST00000548825 TRAV9-1A0A075B6T8 112 aa10.8□□□□□ -0.68
PRPF40B-209ENST00000548825 FAM181BA6NEQ2 426 aa10.8□□□□□ -0.68
PRPF40B-209ENST00000548825 SMKR1H3BMG3 65 aa10.8□□□□□ -0.68
PRPF40B-209ENST00000548825 K7EIM0 57 aa10.8□□□□□ -0.68
PRPF40B-209ENST00000548825 ALKBH7Q9BT30 221 aaPredicted RBP10.8□□□□□ -0.68
PRPF40B-209ENST00000548825 JKAMPQ9P055 326 aa10.8□□□□□ -0.68
PRPF40B-209ENST00000548825 NAV2Q8IVL1 2488 aa10.8□□□□□ -0.68
PRPF40B-209ENST00000548825 K7EQM0 130 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 LEPROTL1O95214 131 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 ORM1P02763 201 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 PAX1P15863 534 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 CEACAM3P40198 252 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 NBL1P41271 181 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 CA7P43166 264 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 RPL11P62913 178 aaKnown RBP10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 OR10J3Q5JRS4 329 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 FAM120AOSQ5T036 256 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 Q86TA4 180 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 G3V318 75 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 ARPC1AQ92747 370 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 PSG8Q9UQ74 426 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 KIR2DL5BA0A0G2JN68 375 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 KIR2DL5BA0A0G2JPC4 375 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 TMEM213A2RRL7 107 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 I3L2K1 104 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 TNFRSF13BO14836 293 aaPredicted RBP10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 NDUFB8O95169 186 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 NPSP0C0P6 89 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 CSN1S1P47710 185 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 UNQ5815/PRO19632Q6UWF5 114 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 KIR2DL5AQ8N109 375 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 BEND2Q8NDZ0 799 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 OR4B1Q8NGF8 309 aa10.79□□□□□ -0.68
PRPF40B-209ENST00000548825 ITPR1Q14643 2758 aa10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 CSMD2Q7Z408 3487 aa10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 NCR2O95944 276 aa10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 ZFP36P26651 326 aaKnown RBP10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 ADORA2A-AS1P86434 159 aa10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 TEX43Q6ZNM6 134 aa10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 RBPMS2Q6ZRY4 209 aaKnown RBP10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 DEFB104AQ8WTQ1 72 aa10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 FMC1Q96HJ9 113 aa10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 CHRDL1Q9BU40 450 aa10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 C21orf62Q9NYP8 219 aa10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 RNF182Q8N6D2 247 aa10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 MBD6Q96DN6 1003 aa10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 OR4C46A6NHA9 309 aa10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 TCF21O43680 179 aa10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 FSTL3O95633 263 aa10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 UQCRFS1P47985 274 aa10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 RELQ04864 619 aaPredicted RBP10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 C5orf64Q2M2E5 130 aa10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 ZNF491Q8N8L2 437 aa10.78□□□□□ -0.68
PRPF40B-209ENST00000548825 SPRY2O43597 315 aa10.77□□□□□ -0.69
PRPF40B-209ENST00000548825 BTF3P20290 206 aaKnown RBP10.77□□□□□ -0.69
PRPF40B-209ENST00000548825 BRD3OSQ6XYD6 125 aa10.77□□□□□ -0.69
PRPF40B-209ENST00000548825 TOMM40O96008 361 aa10.77□□□□□ -0.69
PRPF40B-209ENST00000548825 APOHP02749 345 aaPredicted RBP10.77□□□□□ -0.69
PRPF40B-209ENST00000548825 MFAP4P55083 255 aa10.77□□□□□ -0.69
PRPF40B-209ENST00000548825 ERCC8Q13216 396 aa10.77□□□□□ -0.69
PRPF40B-209ENST00000548825 LY6EQ16553 131 aa10.77□□□□□ -0.69
PRPF40B-209ENST00000548825 OTORQ9NRC9 128 aa10.77□□□□□ -0.69
PRPF40B-209ENST00000548825 CLEC19AQ6UXS0 136 aa10.76□□□□□ -0.69
PRPF40B-209ENST00000548825 FA2HQ7L5A8 372 aa10.76□□□□□ -0.69
PRPF40B-209ENST00000548825 ZNF462Q96JM2 2506 aa10.76□□□□□ -0.69
PRPF40B-209ENST00000548825 A0A1W2PPR1 153 aa10.76□□□□□ -0.69
PRPF40B-209ENST00000548825 DNLZQ5SXM8 178 aa10.76□□□□□ -0.69
PRPF40B-209ENST00000548825 SPATA12Q7Z6I5 190 aa10.76□□□□□ -0.69
PRPF40B-209ENST00000548825 TRBV19A0A075B6N1 114 aa10.76□□□□□ -0.69
PRPF40B-209ENST00000548825 A0A1B0GUT8 65 aa10.76□□□□□ -0.69
PRPF40B-209ENST00000548825 LINC01548A6NM66 108 aa10.76□□□□□ -0.69
PRPF40B-209ENST00000548825 CLEC3BP05452 202 aa10.76□□□□□ -0.69
PRPF40B-209ENST00000548825 CRYGCP07315 174 aa10.76□□□□□ -0.69
PRPF40B-209ENST00000548825 TWIST1Q15672 202 aa10.76□□□□□ -0.69
PRPF40B-209ENST00000548825 COX19Q49B96 90 aa10.76□□□□□ -0.69
PRPF40B-209ENST00000548825 STPG4Q8N801 248 aa10.76□□□□□ -0.69
PRPF40B-209ENST00000548825 C18orf15Q96N68 181 aa10.76□□□□□ -0.69
PRPF40B-209ENST00000548825 BPESC1Q9GZL8 116 aa10.76□□□□□ -0.69
PRPF40B-209ENST00000548825 UQCR10Q9UDW1 63 aa10.76□□□□□ -0.69
PRPF40B-209ENST00000548825 HSBP1L1C9JCN9 74 aa10.75□□□□□ -0.69
PRPF40B-209ENST00000548825 LINC00614P0C842 121 aa10.75□□□□□ -0.69
PRPF40B-209ENST00000548825 IGLL1P15814 213 aa10.75□□□□□ -0.69
PRPF40B-209ENST00000548825 AMN1Q8IY45 258 aa10.75□□□□□ -0.69
PRPF40B-209ENST00000548825 TMEM208Q9BTX3 173 aa10.75□□□□□ -0.69
PRPF40B-209ENST00000548825 TMEM70Q9BUB7 260 aa10.75□□□□□ -0.69
PRPF40B-209ENST00000548825 CHODLQ9H9P2 273 aa10.75□□□□□ -0.69
PRPF40B-209ENST00000548825 LTAP01374 205 aa10.75□□□□□ -0.69
PRPF40B-209ENST00000548825 KLRB1Q12918 225 aa10.75□□□□□ -0.69
PRPF40B-209ENST00000548825 C15orf32Q32M92 178 aa10.75□□□□□ -0.69
PRPF40B-209ENST00000548825 FAM106CPP0CH98 169 aa10.74□□□□□ -0.69
PRPF40B-209ENST00000548825 FAM106AQ4KMX7 169 aa10.74□□□□□ -0.69
PRPF40B-209ENST00000548825 FAM71F2Q6NXP2 309 aa10.74□□□□□ -0.69
PRPF40B-209ENST00000548825 ARL6IP6Q8N6S5 226 aa10.74□□□□□ -0.69
PRPF40B-209ENST00000548825 LAMTOR2Q9Y2Q5 125 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms