RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 ZNF546Q86UE3 836 aa10.2□□□□□ -0.78
COL2A1-209ENST00000546974 OR8A1Q8NGG7 326 aa10.2□□□□□ -0.78
COL2A1-209ENST00000546974 LRRC20Q8TCA0 184 aa10.2□□□□□ -0.78
COL2A1-209ENST00000546974 C20orf85Q9H1P6 137 aa10.2□□□□□ -0.78
COL2A1-209ENST00000546974 LYRM9A8MSI8 78 aa10.19□□□□□ -0.78
COL2A1-209ENST00000546974 ZNF705GA8MUZ8 300 aaPredicted RBP10.19□□□□□ -0.78
COL2A1-209ENST00000546974 BOLA2-SMG1P6H3BVE0 249 aa10.19□□□□□ -0.78
COL2A1-209ENST00000546974 GOSR2O14653 212 aa10.19□□□□□ -0.78
COL2A1-209ENST00000546974 PLA2G10O15496 165 aa10.19□□□□□ -0.78
COL2A1-209ENST00000546974 CXCL2P19875 107 aa10.19□□□□□ -0.78
COL2A1-209ENST00000546974 TSPOP30536 169 aa10.19□□□□□ -0.78
COL2A1-209ENST00000546974 ARL16Q0P5N6 197 aa10.19□□□□□ -0.78
COL2A1-209ENST00000546974 LGALS9BQ3B8N2 356 aa10.19□□□□□ -0.78
COL2A1-209ENST00000546974 UBE2DNLQ8IWF7 75 aa10.19□□□□□ -0.78
COL2A1-209ENST00000546974 NACAE9PAV3 2078 aa10.18□□□□□ -0.78
COL2A1-209ENST00000546974 M0R2N4 97 aa10.18□□□□□ -0.78
COL2A1-209ENST00000546974 AGPAT2O15120 278 aa10.18□□□□□ -0.78
COL2A1-209ENST00000546974 LYRM1O43325 122 aa10.18□□□□□ -0.78
COL2A1-209ENST00000546974 PRM2P04554 102 aa10.18□□□□□ -0.78
COL2A1-209ENST00000546974 RHOBP62745 196 aa10.18□□□□□ -0.78
COL2A1-209ENST00000546974 HIST1H1AQ02539 215 aaPredicted RBP10.18□□□□□ -0.78
COL2A1-209ENST00000546974 ZNF846Q147U1 533 aa10.18□□□□□ -0.78
COL2A1-209ENST00000546974 RNF212Q495C1 297 aa10.18□□□□□ -0.78
COL2A1-209ENST00000546974 LINC00305Q7Z4B0 112 aa10.18□□□□□ -0.78
COL2A1-209ENST00000546974 BAP18Q8IXM2 172 aa10.18□□□□□ -0.78
COL2A1-209ENST00000546974 TMEM256Q8N2U0 113 aa10.18□□□□□ -0.78
COL2A1-209ENST00000546974 TRAV12-2A0A075B6T6 113 aa10.17□□□□□ -0.78
COL2A1-209ENST00000546974 L7N2F9 121 aa10.17□□□□□ -0.78
COL2A1-209ENST00000546974 TCRBP04435 133 aa10.17□□□□□ -0.78
COL2A1-209ENST00000546974 VAMP2P63027 116 aa10.17□□□□□ -0.78
COL2A1-209ENST00000546974 TMEM88Q6PEY1 159 aa10.17□□□□□ -0.78
COL2A1-209ENST00000546974 LCN15Q6UWW0 184 aa10.17□□□□□ -0.78
COL2A1-209ENST00000546974 BPIFA4PQ86YQ2 179 aa10.17□□□□□ -0.78
COL2A1-209ENST00000546974 MGST2Q99735 147 aa10.17□□□□□ -0.78
COL2A1-209ENST00000546974 SLC50A1Q9BRV3 221 aa10.17□□□□□ -0.78
COL2A1-209ENST00000546974 ZNF331Q9NQX6 463 aaPredicted RBP10.17□□□□□ -0.78
COL2A1-209ENST00000546974 PPP1R14DQ9NXH3 145 aa10.17□□□□□ -0.78
COL2A1-209ENST00000546974 A0A1B0GVY2 172 aa10.16□□□□□ -0.78
COL2A1-209ENST00000546974 CCSO14618 274 aa10.16□□□□□ -0.78
COL2A1-209ENST00000546974 RTL8CO15255 209 aa10.16□□□□□ -0.78
COL2A1-209ENST00000546974 COX7A2P2O60397 106 aa10.16□□□□□ -0.78
COL2A1-209ENST00000546974 AZU1P20160 251 aa10.16□□□□□ -0.78
COL2A1-209ENST00000546974 C15orf53Q8NAA6 179 aa10.16□□□□□ -0.78
COL2A1-209ENST00000546974 TMEM37Q8WXS4 190 aa10.16□□□□□ -0.78
COL2A1-209ENST00000546974 RPUSD4Q96CM3 377 aaKnown RBP10.16□□□□□ -0.78
COL2A1-209ENST00000546974 LINC01587Q99440 93 aa10.16□□□□□ -0.78
COL2A1-209ENST00000546974 LSM5Q9Y4Y9 91 aaKnown RBP10.16□□□□□ -0.78
COL2A1-209ENST00000546974 TRAV6A0A075B6T7 132 aa10.15□□□□□ -0.78
COL2A1-209ENST00000546974 PLAC8L1A1L4L8 177 aa10.15□□□□□ -0.78
COL2A1-209ENST00000546974 FAM25EA8MYX2 175 aa10.15□□□□□ -0.78
COL2A1-209ENST00000546974 CDKN1BP46527 198 aa10.15□□□□□ -0.78
COL2A1-209ENST00000546974 BCAP31P51572 246 aa10.15□□□□□ -0.78
COL2A1-209ENST00000546974 TAS2R60P59551 318 aa10.15□□□□□ -0.78
COL2A1-209ENST00000546974 RAB31Q13636 194 aa10.15□□□□□ -0.78
COL2A1-209ENST00000546974 ZNF431Q8TF32 576 aaPredicted RBP10.15□□□□□ -0.78
COL2A1-209ENST00000546974 C11orf1Q9H5F2 150 aa10.15□□□□□ -0.78
COL2A1-209ENST00000546974 C5orf51A6NDU8 294 aa10.14□□□□□ -0.79
COL2A1-209ENST00000546974 PRSS29PA6NIE9 313 aa10.14□□□□□ -0.79
COL2A1-209ENST00000546974 CAMLGP49069 296 aa10.14□□□□□ -0.79
COL2A1-209ENST00000546974 C10orf113Q5VZT2 155 aa10.14□□□□□ -0.79
COL2A1-209ENST00000546974 Q6ZR54 194 aa10.14□□□□□ -0.79
COL2A1-209ENST00000546974 Q6ZRG5 221 aa10.14□□□□□ -0.79
COL2A1-209ENST00000546974 C12orf45Q8N5I9 185 aaPredicted RBP10.14□□□□□ -0.79
COL2A1-209ENST00000546974 C16orf74Q96GX8 76 aa10.14□□□□□ -0.79
COL2A1-209ENST00000546974 C2orf50Q96LR7 162 aa10.14□□□□□ -0.79
COL2A1-209ENST00000546974 DNAJC4Q9NNZ3 241 aa10.14□□□□□ -0.79
COL2A1-209ENST00000546974 NUDT15Q9NV35 164 aa10.14□□□□□ -0.79
COL2A1-209ENST00000546974 IGLV2-18A0A075B6J9 118 aa10.13□□□□□ -0.79
COL2A1-209ENST00000546974 SNRPCP09234 159 aaKnown RBP10.13□□□□□ -0.79
COL2A1-209ENST00000546974 IGLC2P0DOY2 106 aa10.13□□□□□ -0.79
COL2A1-209ENST00000546974 DEFB130BP0DP73 79 aa10.13□□□□□ -0.79
COL2A1-209ENST00000546974 DEFB130AP0DP74 79 aa10.13□□□□□ -0.79
COL2A1-209ENST00000546974 PVALBP20472 110 aaPredicted RBP10.13□□□□□ -0.79
COL2A1-209ENST00000546974 CAV2P51636 162 aa10.13□□□□□ -0.79
COL2A1-209ENST00000546974 FAM3BP58499 235 aaPredicted RBP10.13□□□□□ -0.79
COL2A1-209ENST00000546974 OPCMLQ14982 345 aa10.13□□□□□ -0.79
COL2A1-209ENST00000546974 FCN2Q15485 313 aa10.13□□□□□ -0.79
COL2A1-209ENST00000546974 MORN5Q5VZ52 161 aa10.13□□□□□ -0.79
COL2A1-209ENST00000546974 ZNF493Q6ZR52 646 aa10.13□□□□□ -0.79
COL2A1-209ENST00000546974 NRARPQ7Z6K4 114 aa10.13□□□□□ -0.79
COL2A1-209ENST00000546974 C20orf144Q9BQM9 153 aa10.13□□□□□ -0.79
COL2A1-209ENST00000546974 SEC22CQ9BRL7 303 aa10.13□□□□□ -0.79
COL2A1-209ENST00000546974 CCDC32Q9BV29 185 aa10.13□□□□□ -0.79
COL2A1-209ENST00000546974 WDR83OSQ9Y284 106 aa10.13□□□□□ -0.79
COL2A1-209ENST00000546974 PXMP4Q9Y6I8 212 aa10.13□□□□□ -0.79
COL2A1-209ENST00000546974 FAM24AA6NFZ4 105 aa10.12□□□□□ -0.79
COL2A1-209ENST00000546974 CBY3A6NI87 242 aa10.12□□□□□ -0.79
COL2A1-209ENST00000546974 CST7O76096 145 aa10.12□□□□□ -0.79
COL2A1-209ENST00000546974 H2AFB2P0C5Z0 115 aa10.12□□□□□ -0.79
COL2A1-209ENST00000546974 PRB4P10163 310 aaPredicted RBP10.12□□□□□ -0.79
COL2A1-209ENST00000546974 VWC2Q2TAL6 325 aa10.12□□□□□ -0.79
COL2A1-209ENST00000546974 OR1L4Q8NGR5 311 aa10.12□□□□□ -0.79
COL2A1-209ENST00000546974 OR10J6PQ8NGY7 276 aa10.12□□□□□ -0.79
COL2A1-209ENST00000546974 SAT2Q96F10 170 aaPredicted RBP10.12□□□□□ -0.79
COL2A1-209ENST00000546974 UQCC1Q9NVA1 299 aa10.12□□□□□ -0.79
COL2A1-209ENST00000546974 TIMM8BQ9Y5J9 83 aaPredicted RBP10.12□□□□□ -0.79
COL2A1-209ENST00000546974 PCLOQ9Y6V0 5065 aa10.11□□□□□ -0.79
COL2A1-209ENST00000546974 PRAC2D3DTV9 90 aa10.11□□□□□ -0.79
COL2A1-209ENST00000546974 F5H768 121 aa10.11□□□□□ -0.79
COL2A1-209ENST00000546974 H3BQ15 152 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms