RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 DSPP15924 2871 aaKnown RBP11.24□□□□□ -0.61
SRP54-202ENST00000546080 PCP2Q8IVA1 136 aa11.23□□□□□ -0.61
SRP54-202ENST00000546080 LYPD1Q8N2G4 141 aa11.23□□□□□ -0.61
SRP54-202ENST00000546080 NPFFR1Q9GZQ6 430 aa11.23□□□□□ -0.61
SRP54-202ENST00000546080 SIGLEC9Q9Y336 463 aa11.23□□□□□ -0.61
SRP54-202ENST00000546080 CADP27708 2225 aa11.23□□□□□ -0.61
SRP54-202ENST00000546080 TMSB15BA0A087X1C1 80 aa11.23□□□□□ -0.61
SRP54-202ENST00000546080 C17orf100A8MU93 164 aa11.23□□□□□ -0.61
SRP54-202ENST00000546080 TEX22C9J3V5 150 aa11.23□□□□□ -0.61
SRP54-202ENST00000546080 CDX4O14627 284 aaPredicted RBP11.23□□□□□ -0.61
SRP54-202ENST00000546080 CRYGBP07316 175 aa11.23□□□□□ -0.61
SRP54-202ENST00000546080 FABP2P12104 132 aa11.23□□□□□ -0.61
SRP54-202ENST00000546080 PRSS57Q6UWY2 283 aa11.23□□□□□ -0.61
SRP54-202ENST00000546080 LYPD2Q6UXB3 125 aa11.23□□□□□ -0.61
SRP54-202ENST00000546080 ABHD17AQ96GS6 310 aa11.23□□□□□ -0.61
SRP54-202ENST00000546080 C8orf49Q96NF6 230 aa11.23□□□□□ -0.61
SRP54-202ENST00000546080 SHANK2-AS3Q9BTD1 123 aa11.23□□□□□ -0.61
SRP54-202ENST00000546080 SPENQ96T58 3664 aaKnown RBP11.22□□□□□ -0.61
SRP54-202ENST00000546080 TMEM189A5PLL7 270 aa11.22□□□□□ -0.61
SRP54-202ENST00000546080 H3BRN7 92 aa11.22□□□□□ -0.61
SRP54-202ENST00000546080 MRPL51Q4U2R6 128 aaKnown RBP11.22□□□□□ -0.61
SRP54-202ENST00000546080 NUP37Q8NFH4 326 aa11.22□□□□□ -0.61
SRP54-202ENST00000546080 TMEM178BH3BS89 294 aa11.21□□□□□ -0.61
SRP54-202ENST00000546080 I3L2K1 104 aa11.21□□□□□ -0.61
SRP54-202ENST00000546080 SMIM17P0DL12 118 aa11.21□□□□□ -0.61
SRP54-202ENST00000546080 IGHV1-8P0DP01 117 aa11.21□□□□□ -0.61
SRP54-202ENST00000546080 C22orf34Q6ZV56 151 aa11.21□□□□□ -0.61
SRP54-202ENST00000546080 KNTC1P50748 2209 aa11.21□□□□□ -0.61
SRP54-202ENST00000546080 K7EM74 188 aa11.21□□□□□ -0.62
SRP54-202ENST00000546080 M0R3E3 92 aa11.21□□□□□ -0.62
SRP54-202ENST00000546080 IGKV1-17P01599 117 aa11.21□□□□□ -0.62
SRP54-202ENST00000546080 LOXP28300 417 aaPredicted RBP11.21□□□□□ -0.62
SRP54-202ENST00000546080 CEACAM3P40198 252 aa11.21□□□□□ -0.62
SRP54-202ENST00000546080 DLX6P56179 175 aa11.21□□□□□ -0.62
SRP54-202ENST00000546080 FAM27E3Q08E93 113 aa11.21□□□□□ -0.62
SRP54-202ENST00000546080 PPP1R27Q86WC6 154 aa11.21□□□□□ -0.62
SRP54-202ENST00000546080 CCL17Q92583 94 aa11.21□□□□□ -0.62
SRP54-202ENST00000546080 PRRC2CQ9Y520 2896 aaKnown RBP11.2□□□□□ -0.62
SRP54-202ENST00000546080 SMIM13P0DJ93 91 aa11.2□□□□□ -0.62
SRP54-202ENST00000546080 CKS2P33552 79 aa11.2□□□□□ -0.62
SRP54-202ENST00000546080 PAX8Q06710 450 aa11.2□□□□□ -0.62
SRP54-202ENST00000546080 TMEM155Q4W5P6 130 aa11.2□□□□□ -0.62
SRP54-202ENST00000546080 TM4SF20Q53R12 229 aa11.2□□□□□ -0.62
SRP54-202ENST00000546080 SAMD5Q5TGI4 173 aa11.2□□□□□ -0.62
SRP54-202ENST00000546080 CTSZQ9UBR2 303 aa11.2□□□□□ -0.62
SRP54-202ENST00000546080 FAM215AQ9Y5M1 114 aa11.2□□□□□ -0.62
SRP54-202ENST00000546080 SH2D1AO60880 128 aa11.2□□□□□ -0.62
SRP54-202ENST00000546080 NDUFS7O75251 213 aa11.2□□□□□ -0.62
SRP54-202ENST00000546080 ASCL5Q7RTU5 278 aa11.2□□□□□ -0.62
SRP54-202ENST00000546080 WFDC3Q8IUB2 231 aa11.2□□□□□ -0.62
SRP54-202ENST00000546080 DKK2Q9UBU2 259 aa11.2□□□□□ -0.62
SRP54-202ENST00000546080 SMKR1H3BMG3 65 aa11.19□□□□□ -0.62
SRP54-202ENST00000546080 NPYP01303 97 aa11.19□□□□□ -0.62
SRP54-202ENST00000546080 C1orf185Q5T7R7 199 aa11.19□□□□□ -0.62
SRP54-202ENST00000546080 FBXL15Q9H469 300 aa11.19□□□□□ -0.62
SRP54-202ENST00000546080 AAMDCQ9H7C9 122 aa11.19□□□□□ -0.62
SRP54-202ENST00000546080 GCSHP23434 173 aa11.18□□□□□ -0.62
SRP54-202ENST00000546080 ADIPOQQ15848 244 aa11.18□□□□□ -0.62
SRP54-202ENST00000546080 TMEM108Q6UXF1 575 aa11.18□□□□□ -0.62
SRP54-202ENST00000546080 PLXNB1O43157 2135 aa11.18□□□□□ -0.62
SRP54-202ENST00000546080 CIDEAO60543 219 aa11.18□□□□□ -0.62
SRP54-202ENST00000546080 IL4P05112 153 aa11.18□□□□□ -0.62
SRP54-202ENST00000546080 RPL24P83731 157 aaKnown RBP11.18□□□□□ -0.62
SRP54-202ENST00000546080 PLGLAQ15195 96 aa11.18□□□□□ -0.62
SRP54-202ENST00000546080 RNF125Q96EQ8 232 aa11.18□□□□□ -0.62
SRP54-202ENST00000546080 CHTOPQ9Y3Y2 248 aaKnown RBP11.18□□□□□ -0.62
SRP54-202ENST00000546080 IGHV1-3A0A0C4DH29 117 aa11.17□□□□□ -0.62
SRP54-202ENST00000546080 MRPS12O15235 138 aaKnown RBP11.17□□□□□ -0.62
SRP54-202ENST00000546080 FCGR2BP31994 310 aaPredicted RBP11.17□□□□□ -0.62
SRP54-202ENST00000546080 TWIST1Q15672 202 aa11.17□□□□□ -0.62
SRP54-202ENST00000546080 ZNF491Q8N8L2 437 aa11.17□□□□□ -0.62
SRP54-202ENST00000546080 C18orf15Q96N68 181 aa11.17□□□□□ -0.62
SRP54-202ENST00000546080 FBLL1A6NHQ2 334 aaKnown RBP11.17□□□□□ -0.62
SRP54-202ENST00000546080 TNFRSF13BO14836 293 aaPredicted RBP11.17□□□□□ -0.62
SRP54-202ENST00000546080 SAMD13Q5VXD3 122 aa11.17□□□□□ -0.62
SRP54-202ENST00000546080 BCL6BQ8N143 479 aaPredicted RBP11.17□□□□□ -0.62
SRP54-202ENST00000546080 PRSS33Q8NF86 280 aa11.17□□□□□ -0.62
SRP54-202ENST00000546080 TNFRSF14Q92956 283 aa11.17□□□□□ -0.62
SRP54-202ENST00000546080 WI2-2373I1.2A0A1W2PRP0 233 aa11.16□□□□□ -0.62
SRP54-202ENST00000546080 K7EIM0 57 aa11.16□□□□□ -0.62
SRP54-202ENST00000546080 FXYD2P54710 66 aa11.16□□□□□ -0.62
SRP54-202ENST00000546080 DLX1P56177 255 aa11.16□□□□□ -0.62
SRP54-202ENST00000546080 DEFB109BQ30KR1 87 aa11.16□□□□□ -0.62
SRP54-202ENST00000546080 PSMG4Q5JS54 123 aa11.16□□□□□ -0.62
SRP54-202ENST00000546080 PLA2G2CQ5R387 149 aa11.16□□□□□ -0.62
SRP54-202ENST00000546080 PIFOQ8TCI5 191 aa11.16□□□□□ -0.62
SRP54-202ENST00000546080 MAP1LC3AQ9H492 121 aa11.16□□□□□ -0.62
SRP54-202ENST00000546080 ZFHX4Q86UP3 3567 aa11.16□□□□□ -0.62
SRP54-202ENST00000546080 ICE1Q9Y2F5 2266 aa11.16□□□□□ -0.62
SRP54-202ENST00000546080 TMEM11P17152 192 aa11.16□□□□□ -0.62
SRP54-202ENST00000546080 PRB3Q04118 309 aaPredicted RBP11.16□□□□□ -0.62
SRP54-202ENST00000546080 PDE6HQ13956 83 aa11.16□□□□□ -0.62
SRP54-202ENST00000546080 CHAC1Q9BUX1 264 aa11.16□□□□□ -0.62
SRP54-202ENST00000546080 HIGD1BQ9P298 99 aa11.16□□□□□ -0.62
SRP54-202ENST00000546080 TEX48A0A1B0GUV7 120 aa11.15□□□□□ -0.62
SRP54-202ENST00000546080 CEACAM4O75871 244 aa11.15□□□□□ -0.62
SRP54-202ENST00000546080 CNIH1O95406 144 aa11.15□□□□□ -0.62
SRP54-202ENST00000546080 THBDP07204 575 aa11.15□□□□□ -0.62
SRP54-202ENST00000546080 S100A7AQ86SG5 101 aa11.15□□□□□ -0.62
SRP54-202ENST00000546080 IGKV2D-26A0A0A0MRZ7 120 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms