RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 APOBEC3AP31941 199 aaPredicted RBP5.11□□□□□ -1.59
SNHG1-225ENST00000545920 LYZP61626 148 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 ARF6P62330 175 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 HSD52Q0P140 79 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 C10orf55Q5SWW7 151 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 FAM104BQ5XKR9 115 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 SIGLEC15Q6ZMC9 328 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 GOLT1AQ6ZVE7 132 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 ATOH7Q8N100 152 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 ORMDL3Q8N138 153 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 NPBQ8NG41 125 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 PRSS3P2Q8NHM4 247 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 SRSF12Q8WXF0 261 aaKnown RBP5.11□□□□□ -1.59
SNHG1-225ENST00000545920 RPEQ96AT9 228 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 KRTAP17-1Q9BYP8 105 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 DYNLRB1Q9NP97 96 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 CLEC5AQ9NY25 188 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 THYN1Q9P016 225 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 MRPL36Q9P0J6 103 aaKnown RBP5.11□□□□□ -1.59
SNHG1-225ENST00000545920 SMPXQ9UHP9 88 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 PSG8Q9UQ74 426 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 MED13Q9UHV7 2174 aa5.11□□□□□ -1.59
SNHG1-225ENST00000545920 LOC105371242A0A075B767 164 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 LY6LH3BQJ8 138 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 M0R1W7 72 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 MRPS12O15235 138 aaKnown RBP5.1□□□□□ -1.59
SNHG1-225ENST00000545920 HOXA3O43365 443 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-225ENST00000545920 NDUFA3O95167 84 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 IGKV1-17P01599 117 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 HBDP02042 147 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 MFAP4P55083 255 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 BSPH1Q075Z2 132 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 FAM27E3Q08E93 113 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 KLK9Q2XQG4 91 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 MPV17L2Q567V2 206 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 TMEM97Q5BJF2 176 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 HCP5Q6MZN7 132 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 CCDC144NLQ6NUI1 221 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 LINC00322Q6ZN03 302 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-225ENST00000545920 C1orf122Q6ZSJ8 110 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 PRNTQ86SH4 94 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 BOD1L2Q8IYS8 172 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 DEFB123Q8N688 67 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 OR5A1Q8NGJ0 315 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 DSCAML1Q8TD84 2053 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 RNF125Q96EQ8 232 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 AP1S3Q96PC3 154 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 ATP6V0BQ99437 205 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 CNFNQ9BYD5 112 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 HIGD1BQ9P298 99 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 KLK9Q9UKQ9 250 aa5.1□□□□□ -1.59
SNHG1-225ENST00000545920 TANC2Q9HCD6 1990 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 C7orf71A4D174 169 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 TMEM189A5PLL7 270 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 RBAKDNA6NC62 111 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 ZNF785A8K8V0 405 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 K7EIM0 57 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 OVOL3O00110 214 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 PLAUP00749 431 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 MAJINQ3KP22 176 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 ZNF491Q8N8L2 437 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 LY6G5BQ8NDX9 201 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 OR11H6Q8NGC7 330 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 CCL17Q92583 94 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 ZC2HC1AQ96GY0 325 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 ZNF414Q96IQ9 312 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 PRELID3AQ96N28 172 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 NXT2Q9NPJ8 142 aaKnown RBP5.09□□□□□ -1.59
SNHG1-225ENST00000545920 HIF1ANQ9NWT6 349 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 CTSZQ9UBR2 303 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 RPH3ALQ9UNE2 315 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 TECTAO75443 2155 aa5.09□□□□□ -1.59
SNHG1-225ENST00000545920 CDH23Q9H251 3354 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 LAMA3Q16787 3333 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 FAM186AA6NE01 2351 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 KNTC1P50748 2209 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 A1L4Q6 167 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 NBR2O15453 112 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 ATP5LO75964 103 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 CNIH1O95406 144 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 TNFRSF6BO95407 300 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 ARMS2P0C7Q2 107 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 SMIM17P0DL12 118 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 SRSF1Q07955 248 aaKnown RBP eCLIP5.08□□□□□ -1.6
SNHG1-225ENST00000545920 OCIAD2Q56VL3 154 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 LYPD2Q6UXB3 125 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 TTC9CQ8N5M4 171 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 KIR3DL3Q8N743 410 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 DEFB124Q8NES8 71 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 RNASE8Q8TDE3 154 aaKnown RBP5.08□□□□□ -1.6
SNHG1-225ENST00000545920 MRPL53Q96EL3 112 aaKnown RBP5.08□□□□□ -1.6
SNHG1-225ENST00000545920 VKORC1Q9BQB6 163 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 CST9LQ9H4G1 147 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 ZNRD1Q9P1U0 126 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 DPM3Q9P2X0 92 aa5.08□□□□□ -1.6
SNHG1-225ENST00000545920 REV3LO60673 3130 aa5.07□□□□□ -1.6
SNHG1-225ENST00000545920 DNAH14Q0VDD8 3507 aa5.07□□□□□ -1.6
SNHG1-225ENST00000545920 IGLV11-55A0A075B6I3 123 aa5.07□□□□□ -1.6
SNHG1-225ENST00000545920 A0A087X0K7 114 aa5.07□□□□□ -1.6
SNHG1-225ENST00000545920 PPIAL4CA0A0B4J2A2 164 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms