RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 C4orf46Q504U0 113 aa8.41□□□□□ -1.06
GABPB1-206ENST00000543881 PATE2Q6UY27 113 aa8.41□□□□□ -1.06
GABPB1-206ENST00000543881 OR11H7Q8NGC8 314 aa8.41□□□□□ -1.06
GABPB1-206ENST00000543881 IGF2BP2-AS1Q96M15 143 aa8.41□□□□□ -1.06
GABPB1-206ENST00000543881 UHRF2Q96PU4 802 aa8.41□□□□□ -1.06
GABPB1-206ENST00000543881 C7orf50Q9BRJ6 194 aaKnown RBP8.41□□□□□ -1.06
GABPB1-206ENST00000543881 NIPSNAP3BQ9BS92 247 aa8.41□□□□□ -1.06
GABPB1-206ENST00000543881 YTHDF2Q9Y5A9 579 aaKnown RBP8.41□□□□□ -1.06
GABPB1-206ENST00000543881 C16orf90A8MZG2 172 aa8.4□□□□□ -1.06
GABPB1-206ENST00000543881 M0R2Z0 102 aa8.4□□□□□ -1.06
GABPB1-206ENST00000543881 HYPMO75409 117 aa8.4□□□□□ -1.06
GABPB1-206ENST00000543881 SCGB1D2O95969 90 aa8.4□□□□□ -1.06
GABPB1-206ENST00000543881 PRB4P10163 310 aaPredicted RBP8.4□□□□□ -1.06
GABPB1-206ENST00000543881 DLK1P80370 383 aa8.4□□□□□ -1.06
GABPB1-206ENST00000543881 ARL16Q0P5N6 197 aa8.4□□□□□ -1.06
GABPB1-206ENST00000543881 ZNF846Q147U1 533 aa8.4□□□□□ -1.06
GABPB1-206ENST00000543881 SPINK13Q1W4C9 94 aa8.4□□□□□ -1.06
GABPB1-206ENST00000543881 IAH1Q2TAA2 248 aaPredicted RBP8.4□□□□□ -1.06
GABPB1-206ENST00000543881 CCDC28AQ8IWP9 274 aa8.4□□□□□ -1.06
GABPB1-206ENST00000543881 S100ZQ8WXG8 99 aa8.4□□□□□ -1.06
GABPB1-206ENST00000543881 HIGD1AQ9Y241 93 aa8.4□□□□□ -1.06
GABPB1-206ENST00000543881 RCL1Q9Y2P8 373 aaKnown RBP8.4□□□□□ -1.06
GABPB1-206ENST00000543881 PLA2G10O15496 165 aa8.39□□□□□ -1.07
GABPB1-206ENST00000543881 OR5G3P0C626 314 aa8.39□□□□□ -1.07
GABPB1-206ENST00000543881 RAP2BP61225 183 aa8.39□□□□□ -1.07
GABPB1-206ENST00000543881 SLC38A11Q08AI6 406 aa8.39□□□□□ -1.07
GABPB1-206ENST00000543881 RRN3P1Q2M238 152 aa8.39□□□□□ -1.07
GABPB1-206ENST00000543881 C1orf134Q5TEV5 83 aa8.39□□□□□ -1.07
GABPB1-206ENST00000543881 MITD1Q8WV92 249 aa8.39□□□□□ -1.07
GABPB1-206ENST00000543881 NPVFQ9HCQ7 196 aa8.39□□□□□ -1.07
GABPB1-206ENST00000543881 GSKIPQ9P0R6 139 aa8.39□□□□□ -1.07
GABPB1-206ENST00000543881 A0A087X0K7 114 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 CENPXA8MT69 81 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 ZNF705GA8MUZ8 300 aaPredicted RBP8.38□□□□□ -1.07
GABPB1-206ENST00000543881 FNDC10F2Z333 226 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 K7EPK0 472 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 MRPS12O15235 138 aaKnown RBP8.38□□□□□ -1.07
GABPB1-206ENST00000543881 DUSP14O95147 198 aaKnown RBP8.38□□□□□ -1.07
GABPB1-206ENST00000543881 MBPP02686 304 aaPredicted RBP8.38□□□□□ -1.07
GABPB1-206ENST00000543881 HTN3P15516 51 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 RPL7P18124 248 aaKnown RBP8.38□□□□□ -1.07
GABPB1-206ENST00000543881 CXCL3P19876 107 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 S100A7P31151 101 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 TAS2R30P59541 319 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 SELENOTP62341 195 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 S100A12P80511 92 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 BAP18Q8IXM2 172 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 ZNF738Q8NE65 137 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 OR10P1Q8NGE3 313 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 ARL6Q9H0F7 186 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 TRAV12-2A0A075B6T6 113 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 TEX48A0A1B0GUV7 120 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 C7orf66A4D0T2 115 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 CCSO14618 274 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 TSC22D2O75157 780 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 S100A6P06703 90 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 TEPPQ6URK8 271 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 FAM210BQ96KR6 192 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 TMEM208Q9BTX3 173 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 C20orf85Q9H1P6 137 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 ARV1Q9H2C2 271 aa8.38□□□□□ -1.07
GABPB1-206ENST00000543881 TMA7Q9Y2S6 64 aaKnown RBP8.38□□□□□ -1.07
GABPB1-206ENST00000543881 NACAE9PAV3 2078 aa8.37□□□□□ -1.07
GABPB1-206ENST00000543881 PLAC8L1A1L4L8 177 aa8.37□□□□□ -1.07
GABPB1-206ENST00000543881 INSP01308 110 aa8.37□□□□□ -1.07
GABPB1-206ENST00000543881 SNRPCP09234 159 aaKnown RBP8.37□□□□□ -1.07
GABPB1-206ENST00000543881 AZU1P20160 251 aa8.37□□□□□ -1.07
GABPB1-206ENST00000543881 PSG3Q16557 428 aa8.37□□□□□ -1.07
GABPB1-206ENST00000543881 RNF212Q495C1 297 aa8.37□□□□□ -1.07
GABPB1-206ENST00000543881 MORN5Q5VZ52 161 aa8.37□□□□□ -1.07
GABPB1-206ENST00000543881 Q8N1X5 172 aa8.37□□□□□ -1.07
GABPB1-206ENST00000543881 OR8A1Q8NGG7 326 aa8.37□□□□□ -1.07
GABPB1-206ENST00000543881 MGAT4CQ9UBM8 478 aa8.37□□□□□ -1.07
GABPB1-206ENST00000543881 AGPAT2O15120 278 aa8.36□□□□□ -1.07
GABPB1-206ENST00000543881 DAD1P61803 113 aa8.36□□□□□ -1.07
GABPB1-206ENST00000543881 HIST1H1AQ02539 215 aaPredicted RBP8.36□□□□□ -1.07
GABPB1-206ENST00000543881 TNP2Q05952 138 aa8.36□□□□□ -1.07
GABPB1-206ENST00000543881 TMEM88Q6PEY1 159 aa8.36□□□□□ -1.07
GABPB1-206ENST00000543881 AKAP14Q86UN6 197 aa8.36□□□□□ -1.07
GABPB1-206ENST00000543881 TMEM37Q8WXS4 190 aa8.36□□□□□ -1.07
GABPB1-206ENST00000543881 MGST2Q99735 147 aa8.36□□□□□ -1.07
GABPB1-206ENST00000543881 C11orf1Q9H5F2 150 aa8.36□□□□□ -1.07
GABPB1-206ENST00000543881 GOSR2O14653 212 aa8.35□□□□□ -1.07
GABPB1-206ENST00000543881 LYRM1O43325 122 aa8.35□□□□□ -1.07
GABPB1-206ENST00000543881 TCRBP04435 133 aa8.35□□□□□ -1.07
GABPB1-206ENST00000543881 RHOBP62745 196 aa8.35□□□□□ -1.07
GABPB1-206ENST00000543881 FCN2Q15485 313 aa8.35□□□□□ -1.07
GABPB1-206ENST00000543881 LINC00305Q7Z4B0 112 aa8.35□□□□□ -1.07
GABPB1-206ENST00000543881 ZNF546Q86UE3 836 aa8.35□□□□□ -1.07
GABPB1-206ENST00000543881 SEC22CQ9BRL7 303 aa8.35□□□□□ -1.07
GABPB1-206ENST00000543881 GGACTQ9BVM4 153 aa8.35□□□□□ -1.07
GABPB1-206ENST00000543881 HERC1Q15751 4861 aa8.35□□□□□ -1.07
GABPB1-206ENST00000543881 TRAV6A0A075B6T7 132 aa8.34□□□□□ -1.07
GABPB1-206ENST00000543881 H3BTX0 84 aa8.34□□□□□ -1.07
GABPB1-206ENST00000543881 TSPOP30536 169 aa8.34□□□□□ -1.07
GABPB1-206ENST00000543881 PXDC1Q5TGL8 231 aa8.34□□□□□ -1.07
GABPB1-206ENST00000543881 LRRC20Q8TCA0 184 aa8.34□□□□□ -1.07
GABPB1-206ENST00000543881 RPUSD4Q96CM3 377 aaKnown RBP8.34□□□□□ -1.07
GABPB1-206ENST00000543881 SCRT2Q9NQ03 307 aa8.34□□□□□ -1.07
GABPB1-206ENST00000543881 ZNF331Q9NQX6 463 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms