RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 NUPR1O60356 82 aa15.7■□□□□ 0.1
SUDS3-204ENST00000543473 PLNP26678 52 aa15.7■□□□□ 0.1
SUDS3-204ENST00000543473 RHOGP84095 191 aa15.7■□□□□ 0.1
SUDS3-204ENST00000543473 ZFAND6Q6FIF0 208 aa15.7■□□□□ 0.1
SUDS3-204ENST00000543473 TMEM95Q3KNT9 176 aa15.69■□□□□ 0.1
SUDS3-204ENST00000543473 GLMPQ8WWB7 406 aa15.69■□□□□ 0.1
SUDS3-204ENST00000543473 PIMREGQ9BSJ6 248 aa15.69■□□□□ 0.1
SUDS3-204ENST00000543473 IGHV1-8P0DP01 117 aa15.69■□□□□ 0.1
SUDS3-204ENST00000543473 WNT2P09544 360 aa15.69■□□□□ 0.1
SUDS3-204ENST00000543473 SSC4DQ8WTU2 575 aa15.69■□□□□ 0.1
SUDS3-204ENST00000543473 LYNX1G3V0Z9 82 aa15.69■□□□□ 0.1
SUDS3-204ENST00000543473 RNASE1P07998 156 aaKnown RBP15.69■□□□□ 0.1
SUDS3-204ENST00000543473 LYNX1P0DP58 116 aa15.69■□□□□ 0.1
SUDS3-204ENST00000543473 ERG28Q9UKR5 140 aa15.69■□□□□ 0.1
SUDS3-204ENST00000543473 K7EN84 100 aa15.68■□□□□ 0.1
SUDS3-204ENST00000543473 RAX2Q96IS3 184 aa15.68■□□□□ 0.1
SUDS3-204ENST00000543473 GAFA1Q96PS6 74 aa15.68■□□□□ 0.1
SUDS3-204ENST00000543473 SLC25A15Q9Y619 301 aa15.68■□□□□ 0.1
SUDS3-204ENST00000543473 USF3Q68DE3 2245 aa15.68■□□□□ 0.1
SUDS3-204ENST00000543473 COX8AP10176 69 aa15.68■□□□□ 0.1
SUDS3-204ENST00000543473 TDRG1Q3Y452 100 aa15.68■□□□□ 0.1
SUDS3-204ENST00000543473 CFHR2P36980 270 aa15.68■□□□□ 0.1
SUDS3-204ENST00000543473 NUP210Q8TEM1 1887 aaPredicted RBP15.68■□□□□ 0.1
SUDS3-204ENST00000543473 TMEM249Q2WGJ8 235 aa15.68■□□□□ 0.1
SUDS3-204ENST00000543473 CD7P09564 240 aa15.67■□□□□ 0.1
SUDS3-204ENST00000543473 BVES-AS1Q5T3Y7 98 aa15.67■□□□□ 0.1
SUDS3-204ENST00000543473 WDR86Q86TI4 376 aa15.67■□□□□ 0.1
SUDS3-204ENST00000543473 PROK2Q9HC23 129 aa15.67■□□□□ 0.1
SUDS3-204ENST00000543473 PGPEP1Q9NXJ5 209 aa15.67■□□□□ 0.1
SUDS3-204ENST00000543473 IGHV1-3A0A0C4DH29 117 aa15.67■□□□□ 0.1
SUDS3-204ENST00000543473 PRTN3P24158 256 aa15.67■□□□□ 0.1
SUDS3-204ENST00000543473 OR13C6PQ8NH95 151 aa15.67■□□□□ 0.1
SUDS3-204ENST00000543473 SIGLEC9Q9Y336 463 aa15.67■□□□□ 0.1
SUDS3-204ENST00000543473 TRAV8-4A0A0B4J246 113 aa15.66■□□□□ 0.1
SUDS3-204ENST00000543473 Q6ZS92 163 aa15.66■□□□□ 0.1
SUDS3-204ENST00000543473 CCL19Q99731 98 aa15.66■□□□□ 0.1
SUDS3-204ENST00000543473 NOTCH3Q9UM47 2321 aa15.66■□□□□ 0.1
SUDS3-204ENST00000543473 IGKV3OR2-268A0A0C4DH90 116 aa15.66■□□□□ 0.1
SUDS3-204ENST00000543473 Q8NFD4 153 aa15.66■□□□□ 0.1
SUDS3-204ENST00000543473 A0A1W2PPI3 338 aa15.66■□□□□ 0.1
SUDS3-204ENST00000543473 TMEM213A2RRL7 107 aa15.66■□□□□ 0.1
SUDS3-204ENST00000543473 CCL25O15444 150 aa15.65■□□□□ 0.1
SUDS3-204ENST00000543473 VWC2Q2TAL6 325 aa15.65■□□□□ 0.1
SUDS3-204ENST00000543473 ZNRD1Q9P1U0 126 aa15.65■□□□□ 0.1
SUDS3-204ENST00000543473 TECTAO75443 2155 aa15.65■□□□□ 0.1
SUDS3-204ENST00000543473 IGHV3-11P01762 117 aa15.65■□□□□ 0.1
SUDS3-204ENST00000543473 SPINK8P0C7L1 97 aa15.65■□□□□ 0.1
SUDS3-204ENST00000543473 LINC01549A6NIU2 74 aa15.65■□□□□ 0.1
SUDS3-204ENST00000543473 ASPHD1Q5U4P2 390 aa15.65■□□□□ 0.1
SUDS3-204ENST00000543473 RNF182Q8N6D2 247 aa15.65■□□□□ 0.1
SUDS3-204ENST00000543473 IGLC7A0M8Q6 106 aa15.64■□□□□ 0.09
SUDS3-204ENST00000543473 DUX5Q96PT3 197 aa15.64■□□□□ 0.09
SUDS3-204ENST00000543473 TRAV40A0A0B4J280 105 aa15.64■□□□□ 0.09
SUDS3-204ENST00000543473 ZNF503-AS2A6NEH8 195 aa15.64■□□□□ 0.09
SUDS3-204ENST00000543473 CDKN1BP46527 198 aa15.64■□□□□ 0.09
SUDS3-204ENST00000543473 RRN3P1Q2M238 152 aa15.64■□□□□ 0.09
SUDS3-204ENST00000543473 NEU4Q8WWR8 484 aaPredicted RBP15.64■□□□□ 0.09
SUDS3-204ENST00000543473 K7EP34 96 aa15.63■□□□□ 0.09
SUDS3-204ENST00000543473 ETDBQ3ZM63 59 aa15.63■□□□□ 0.09
SUDS3-204ENST00000543473 FAM104BQ5XKR9 115 aa15.63■□□□□ 0.09
SUDS3-204ENST00000543473 NDUFA4L2Q9NRX3 87 aa15.63■□□□□ 0.09
SUDS3-204ENST00000543473 MOB4Q9Y3A3 225 aa15.63■□□□□ 0.09
SUDS3-204ENST00000543473 TMEM178BH3BS89 294 aa15.63■□□□□ 0.09
SUDS3-204ENST00000543473 IGHG3P01860 377 aa15.63■□□□□ 0.09
SUDS3-204ENST00000543473 TRAV12-3A0A0B4J271 114 aa15.63■□□□□ 0.09
SUDS3-204ENST00000543473 PRR20EP86478 221 aa15.63■□□□□ 0.09
SUDS3-204ENST00000543473 PRR20CP86479 221 aa15.63■□□□□ 0.09
SUDS3-204ENST00000543473 PRR20DP86480 221 aa15.63■□□□□ 0.09
SUDS3-204ENST00000543473 PRR20BP86481 221 aa15.63■□□□□ 0.09
SUDS3-204ENST00000543473 PRR20AP86496 221 aa15.63■□□□□ 0.09
SUDS3-204ENST00000543473 IGFL4Q6B9Z1 124 aa15.63■□□□□ 0.09
SUDS3-204ENST00000543473 IGHV3-64A0A075B6Q5 118 aa15.62■□□□□ 0.09
SUDS3-204ENST00000543473 TNFRSF6BO95407 300 aa15.62■□□□□ 0.09
SUDS3-204ENST00000543473 SHANK2-AS3Q9BTD1 123 aa15.62■□□□□ 0.09
SUDS3-204ENST00000543473 RNF5Q99942 180 aa15.62■□□□□ 0.09
SUDS3-204ENST00000543473 TSSC4Q9Y5U2 329 aaPredicted RBP15.62■□□□□ 0.09
SUDS3-204ENST00000543473 PRSS57Q6UWY2 283 aa15.62■□□□□ 0.09
SUDS3-204ENST00000543473 ZNF562Q6V9R5 426 aa15.62■□□□□ 0.09
SUDS3-204ENST00000543473 CEACAM8P31997 349 aaPredicted RBP15.61■□□□□ 0.09
SUDS3-204ENST00000543473 C15orf32Q32M92 178 aa15.61■□□□□ 0.09
SUDS3-204ENST00000543473 MSRB2Q9Y3D2 182 aa15.61■□□□□ 0.09
SUDS3-204ENST00000543473 KIAA1671Q9BY89 1806 aa15.61■□□□□ 0.09
SUDS3-204ENST00000543473 YLPM1P49750 1951 aaKnown RBP15.6■□□□□ 0.09
SUDS3-204ENST00000543473 TMEM8BA6NDV4 472 aa15.6■□□□□ 0.09
SUDS3-204ENST00000543473 HAX1O00165 279 aa15.6■□□□□ 0.09
SUDS3-204ENST00000543473 LGALS9BQ3B8N2 356 aa15.6■□□□□ 0.09
SUDS3-204ENST00000543473 LGALS9CQ6DKI2 356 aa15.6■□□□□ 0.09
SUDS3-204ENST00000543473 FAM168AQ92567 244 aa15.6■□□□□ 0.09
SUDS3-204ENST00000543473 CHD3Q12873 2000 aaKnown RBP15.6■□□□□ 0.09
SUDS3-204ENST00000543473 LCNL1Q6ZST4 164 aa15.6■□□□□ 0.09
SUDS3-204ENST00000543473 MED13LQ71F56 2210 aa15.6■□□□□ 0.09
SUDS3-204ENST00000543473 MBD3L4A6NDZ8 208 aaPredicted RBP15.6■□□□□ 0.09
SUDS3-204ENST00000543473 MBD3L3A6NE82 208 aaPredicted RBP15.6■□□□□ 0.09
SUDS3-204ENST00000543473 MBD3L5A6NJ08 208 aaPredicted RBP15.6■□□□□ 0.09
SUDS3-204ENST00000543473 TMEM238C9JI98 176 aa15.6■□□□□ 0.09
SUDS3-204ENST00000543473 Q6ZR03 302 aa15.6■□□□□ 0.09
SUDS3-204ENST00000543473 MBD3L2Q8NHZ7 208 aaPredicted RBP15.6■□□□□ 0.09
SUDS3-204ENST00000543473 CUL9Q8IWT3 2517 aa15.6■□□□□ 0.09
SUDS3-204ENST00000543473 PDE6HQ13956 83 aa15.59■□□□□ 0.09
SUDS3-204ENST00000543473 DENND4CQ5VZ89 1909 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms