RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 ARL17AQ8IVW1 177 aa6.6□□□□□ -1.35
PRKAB1-207ENST00000542698 OR4X2Q8NGF9 303 aa6.6□□□□□ -1.35
PRKAB1-207ENST00000542698 FXYD5Q96DB9 178 aa6.6□□□□□ -1.35
PRKAB1-207ENST00000542698 VKORC1Q9BQB6 163 aa6.6□□□□□ -1.35
PRKAB1-207ENST00000542698 ZNF492Q9P255 531 aa6.6□□□□□ -1.35
PRKAB1-207ENST00000542698 HTN1P15515 57 aa6.6□□□□□ -1.35
PRKAB1-207ENST00000542698 DIAPH2-AS1Q14236 149 aa6.6□□□□□ -1.35
PRKAB1-207ENST00000542698 GUSBP1Q15486 140 aa6.6□□□□□ -1.35
PRKAB1-207ENST00000542698 TTC9CQ8N5M4 171 aa6.6□□□□□ -1.35
PRKAB1-207ENST00000542698 OR2K2Q8NGT1 345 aa6.6□□□□□ -1.35
PRKAB1-207ENST00000542698 FAM215AQ9Y5M1 114 aa6.6□□□□□ -1.35
PRKAB1-207ENST00000542698 IGKV2-40A0A087WW87 121 aaPredicted RBP6.6□□□□□ -1.35
PRKAB1-207ENST00000542698 IGKV2D-40P01614 121 aaPredicted RBP6.6□□□□□ -1.35
PRKAB1-207ENST00000542698 ID1P41134 155 aa6.6□□□□□ -1.35
PRKAB1-207ENST00000542698 SPRNQ5BIV9 151 aa6.6□□□□□ -1.35
PRKAB1-207ENST00000542698 LINC00311Q8N616 119 aa6.6□□□□□ -1.35
PRKAB1-207ENST00000542698 TPSG1Q9NRR2 321 aa6.6□□□□□ -1.35
PRKAB1-207ENST00000542698 HCFC1P51610 2035 aa6.59□□□□□ -1.35
PRKAB1-207ENST00000542698 A0A1W2PNU3 283 aaPredicted RBP6.59□□□□□ -1.35
PRKAB1-207ENST00000542698 CEACAM8P31997 349 aaPredicted RBP6.59□□□□□ -1.35
PRKAB1-207ENST00000542698 GAGE1Q13065 139 aa6.59□□□□□ -1.35
PRKAB1-207ENST00000542698 C5orf64Q2M2E5 130 aa6.59□□□□□ -1.35
PRKAB1-207ENST00000542698 STPG4Q8N801 248 aa6.59□□□□□ -1.35
PRKAB1-207ENST00000542698 SHANK2-AS3Q9BTD1 123 aa6.59□□□□□ -1.35
PRKAB1-207ENST00000542698 DKK4Q9UBT3 224 aa6.59□□□□□ -1.35
PRKAB1-207ENST00000542698 ACACBO00763 2458 aa6.59□□□□□ -1.35
PRKAB1-207ENST00000542698 SZT2Q5T011 3432 aa6.59□□□□□ -1.35
PRKAB1-207ENST00000542698 CNTFRP26992 372 aa6.59□□□□□ -1.35
PRKAB1-207ENST00000542698 LOXP28300 417 aaPredicted RBP6.59□□□□□ -1.35
PRKAB1-207ENST00000542698 RHOGP84095 191 aa6.59□□□□□ -1.35
PRKAB1-207ENST00000542698 DAZAP2Q15038 168 aaPredicted RBP6.59□□□□□ -1.35
PRKAB1-207ENST00000542698 AMN1Q8IY45 258 aa6.59□□□□□ -1.35
PRKAB1-207ENST00000542698 SLC50A1Q9BRV3 221 aa6.59□□□□□ -1.35
PRKAB1-207ENST00000542698 IGKV1OR2-108A0A075B7D4 117 aa6.59□□□□□ -1.36
PRKAB1-207ENST00000542698 E7EQL1 145 aa6.59□□□□□ -1.36
PRKAB1-207ENST00000542698 TRGV3P03979 118 aa6.59□□□□□ -1.36
PRKAB1-207ENST00000542698 FRMD6-AS1P0C7T7 363 aa6.59□□□□□ -1.36
PRKAB1-207ENST00000542698 TDGF1P13385 188 aa6.59□□□□□ -1.36
PRKAB1-207ENST00000542698 FXYD7P58549 80 aa6.59□□□□□ -1.36
PRKAB1-207ENST00000542698 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 NCR2O95944 276 aa6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 COL8A2P25067 703 aa6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 IFI27P40305 119 aaPredicted RBP6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 IGFL3Q6UXB1 125 aa6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 THAP8Q8NA92 274 aa6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 OR9G4Q8NGQ1 327 aa6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 OR1N2Q8NGR9 330 aa6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 LRP4O75096 1905 aa6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 EVI2AP22794 236 aa6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 SSBP2P81877 361 aaPredicted RBP6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 HSD52Q0P140 79 aa6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 DGAT2L7PQ6IED9 249 aa6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 SCGB3A1Q96QR1 104 aa6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 JKAMPQ9P055 326 aa6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 CD5LO43866 347 aa6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 CR1LQ2VPA4 569 aa6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 MORN5Q5VZ52 161 aa6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 Q8TAT8 98 aa6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 SRSF8Q9BRL6 282 aaKnown RBP6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 SELENOKQ9Y6D0 94 aa6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 PRRC2CQ9Y520 2896 aaKnown RBP6.58□□□□□ -1.36
PRKAB1-207ENST00000542698 TRBV19A0A075B6N1 114 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 SH2D1AO60880 128 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 WISP2O76076 250 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 WIPF2Q8TF74 440 aaPredicted RBP6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 KIR2DL4Q99706 377 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 NHP2Q9NX24 153 aaKnown RBP6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 IGHV3OR16-10A0A075B7F0 116 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 H3BVH4 76 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 DPM2O94777 84 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 SFTPCP11686 197 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 WT1P19544 449 aaPredicted RBP6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 KLRD1Q13241 179 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 PDE6HQ13956 83 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 C15orf32Q32M92 178 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 MAJINQ3KP22 176 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 CSPG4Q6UVK1 2322 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 TLN1Q9Y490 2541 aaKnown RBP6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 ATG2AQ2TAZ0 1938 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 IGHV1-24A0A0C4DH33 117 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 LY6HO94772 140 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 IGLC1P0CG04 106 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 KLRB1Q12918 225 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 LY6EQ16553 131 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 FAM106AQ4KMX7 169 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 FAM159AQ6UWV7 190 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 NAA38Q9BRA0 125 aaKnown RBP6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 SPTBN5Q9NRC6 3674 aaKnown RBP6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 FAM208BQ5VWN6 2430 aa6.57□□□□□ -1.36
PRKAB1-207ENST00000542698 CEP192Q8TEP8 1941 aa6.56□□□□□ -1.36
PRKAB1-207ENST00000542698 NDUFA3O95167 84 aa6.56□□□□□ -1.36
PRKAB1-207ENST00000542698 PPP1R17O96001 155 aa6.56□□□□□ -1.36
PRKAB1-207ENST00000542698 ASIPP42127 132 aa6.56□□□□□ -1.36
PRKAB1-207ENST00000542698 SRSF1Q07955 248 aaKnown RBP eCLIP6.56□□□□□ -1.36
PRKAB1-207ENST00000542698 IGFL4Q6B9Z1 124 aa6.56□□□□□ -1.36
PRKAB1-207ENST00000542698 IGFL2Q6UWQ7 119 aa6.56□□□□□ -1.36
PRKAB1-207ENST00000542698 PATE2Q6UY27 113 aa6.56□□□□□ -1.36
PRKAB1-207ENST00000542698 FAM167A-AS1Q96KT0 104 aa6.56□□□□□ -1.36
PRKAB1-207ENST00000542698 IGLC7A0M8Q6 106 aa6.56□□□□□ -1.36
PRKAB1-207ENST00000542698 GAGE12BA1L429 117 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms