RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 MAJINQ3KP22 176 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 C1orf194Q5T5A4 169 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 SFTA2Q6UW10 78 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 SLC25A2Q9BXI2 301 aa12.93□□□□□ -0.34
VARS2-212ENST00000542001 ARMS2P0C7Q2 107 aa12.92□□□□□ -0.34
VARS2-212ENST00000542001 PRO3102Q9H379 93 aa12.92□□□□□ -0.34
VARS2-212ENST00000542001 DLEU1O43261 78 aa12.92□□□□□ -0.34
VARS2-212ENST00000542001 GATA4P43694 442 aa12.92□□□□□ -0.34
VARS2-212ENST00000542001 PRR20EP86478 221 aa12.92□□□□□ -0.34
VARS2-212ENST00000542001 PRR20CP86479 221 aa12.92□□□□□ -0.34
VARS2-212ENST00000542001 PRR20DP86480 221 aa12.92□□□□□ -0.34
VARS2-212ENST00000542001 PRR20BP86481 221 aa12.92□□□□□ -0.34
VARS2-212ENST00000542001 PRR20AP86496 221 aa12.92□□□□□ -0.34
VARS2-212ENST00000542001 TPTE2P1Q5T6R2 138 aa12.92□□□□□ -0.34
VARS2-212ENST00000542001 FER1L6-AS1Q8NA97 138 aa12.92□□□□□ -0.34
VARS2-212ENST00000542001 MAPK1IP1LQ8NDC0 245 aa12.92□□□□□ -0.34
VARS2-212ENST00000542001 DPF1Q92782 380 aa12.92□□□□□ -0.34
VARS2-212ENST00000542001 ZFP30Q9Y2G7 519 aa12.92□□□□□ -0.34
VARS2-212ENST00000542001 MAP1LC3AQ9H492 121 aa12.92□□□□□ -0.34
VARS2-212ENST00000542001 G3V318 75 aa12.91□□□□□ -0.34
VARS2-212ENST00000542001 Q6ZVH6 145 aa12.91□□□□□ -0.34
VARS2-212ENST00000542001 PRSS33Q8NF86 280 aa12.91□□□□□ -0.34
VARS2-212ENST00000542001 OR10J6PQ8NGY7 276 aa12.91□□□□□ -0.34
VARS2-212ENST00000542001 CFHR2P36980 270 aa12.91□□□□□ -0.34
VARS2-212ENST00000542001 SRSF9Q13242 221 aaKnown RBP eCLIP12.91□□□□□ -0.34
VARS2-212ENST00000542001 C5orf64Q2M2E5 130 aa12.91□□□□□ -0.34
VARS2-212ENST00000542001 LYZL1Q6UWQ5 148 aa12.91□□□□□ -0.34
VARS2-212ENST00000542001 ZNF414Q96IQ9 312 aa12.91□□□□□ -0.34
VARS2-212ENST00000542001 BPESC1Q9GZL8 116 aa12.91□□□□□ -0.34
VARS2-212ENST00000542001 PKD1L2Q7Z442 2459 aa12.91□□□□□ -0.34
VARS2-212ENST00000542001 NCKAP5O14513 1909 aa12.9□□□□□ -0.34
VARS2-212ENST00000542001 CACNG7P62955 275 aa12.9□□□□□ -0.34
VARS2-212ENST00000542001 PSG9Q00887 426 aa12.9□□□□□ -0.34
VARS2-212ENST00000542001 C11orf44Q8N8P7 122 aa12.9□□□□□ -0.34
VARS2-212ENST00000542001 USP34Q70CQ2 3546 aa12.9□□□□□ -0.34
VARS2-212ENST00000542001 TMEM97Q5BJF2 176 aa12.9□□□□□ -0.34
VARS2-212ENST00000542001 AMN1Q8IY45 258 aa12.9□□□□□ -0.34
VARS2-212ENST00000542001 D6R8Y8 96 aa12.9□□□□□ -0.34
VARS2-212ENST00000542001 ERCC8Q13216 396 aa12.9□□□□□ -0.34
VARS2-212ENST00000542001 Q1RN00 199 aa12.9□□□□□ -0.34
VARS2-212ENST00000542001 RNF182Q8N6D2 247 aa12.9□□□□□ -0.34
VARS2-212ENST00000542001 C22orf46C9J442 243 aa12.89□□□□□ -0.35
VARS2-212ENST00000542001 SCGB1C2P0DMR2 95 aa12.89□□□□□ -0.35
VARS2-212ENST00000542001 SAPCD1Q5SSQ6 148 aa12.89□□□□□ -0.35
VARS2-212ENST00000542001 C18orf32Q8TCD1 76 aa12.89□□□□□ -0.35
VARS2-212ENST00000542001 TMEM213A2RRL7 107 aa12.89□□□□□ -0.35
VARS2-212ENST00000542001 H7C2G1 150 aa12.89□□□□□ -0.35
VARS2-212ENST00000542001 ZNF833PQ6ZTB9 187 aa12.89□□□□□ -0.35
VARS2-212ENST00000542001 GTF2H5Q6ZYL4 71 aa12.89□□□□□ -0.35
VARS2-212ENST00000542001 FAM169BQ8N8A8 192 aa12.89□□□□□ -0.35
VARS2-212ENST00000542001 BOD1L1Q8NFC6 3051 aa12.89□□□□□ -0.35
VARS2-212ENST00000542001 SPRY2O43597 315 aa12.89□□□□□ -0.35
VARS2-212ENST00000542001 TMEM75Q8N9X5 138 aa12.89□□□□□ -0.35
VARS2-212ENST00000542001 TRAV9-1A0A075B6T8 112 aa12.88□□□□□ -0.35
VARS2-212ENST00000542001 ORMDL3Q8N138 153 aa12.88□□□□□ -0.35
VARS2-212ENST00000542001 EEF1AKMT3Q96AZ1 226 aa12.88□□□□□ -0.35
VARS2-212ENST00000542001 TRGV9Q99603 122 aa12.88□□□□□ -0.35
VARS2-212ENST00000542001 FN1P02751 2386 aaKnown RBP12.88□□□□□ -0.35
VARS2-212ENST00000542001 FAM181BA6NEQ2 426 aa12.88□□□□□ -0.35
VARS2-212ENST00000542001 LHBP01229 141 aa12.88□□□□□ -0.35
VARS2-212ENST00000542001 HLA-DMBP28068 263 aa12.88□□□□□ -0.35
VARS2-212ENST00000542001 IGFL3Q6UXB1 125 aa12.88□□□□□ -0.35
VARS2-212ENST00000542001 LCNL1Q6ZST4 164 aa12.88□□□□□ -0.35
VARS2-212ENST00000542001 FOXC2Q99958 501 aa12.88□□□□□ -0.35
VARS2-212ENST00000542001 NDUFB8O95169 186 aa12.88□□□□□ -0.35
VARS2-212ENST00000542001 RUSC1-AS1Q66K80 236 aa12.88□□□□□ -0.35
VARS2-212ENST00000542001 C8orf49Q96NF6 230 aa12.88□□□□□ -0.35
VARS2-212ENST00000542001 EPG5Q9HCE0 2579 aa12.88□□□□□ -0.35
VARS2-212ENST00000542001 GAGE10A6NGK3 116 aa12.88□□□□□ -0.35
VARS2-212ENST00000542001 NEU4Q8WWR8 484 aaPredicted RBP12.88□□□□□ -0.35
VARS2-212ENST00000542001 TRAV9-2A0A087WT02 112 aa12.87□□□□□ -0.35
VARS2-212ENST00000542001 DSCAMO60469 2012 aa12.87□□□□□ -0.35
VARS2-212ENST00000542001 GNLYP22749 145 aa12.87□□□□□ -0.35
VARS2-212ENST00000542001 CENPVQ7Z7K6 275 aaPredicted RBP12.87□□□□□ -0.35
VARS2-212ENST00000542001 A0A087X0K7 114 aa12.87□□□□□ -0.35
VARS2-212ENST00000542001 SPTBN5Q9NRC6 3674 aaKnown RBP12.86□□□□□ -0.35
VARS2-212ENST00000542001 MPV17L2Q567V2 206 aa12.86□□□□□ -0.35
VARS2-212ENST00000542001 CCL19Q99731 98 aa12.86□□□□□ -0.35
VARS2-212ENST00000542001 RNASE4P34096 147 aaKnown RBP12.86□□□□□ -0.35
VARS2-212ENST00000542001 TCF15Q12870 199 aa12.86□□□□□ -0.35
VARS2-212ENST00000542001 PATE2Q6UY27 113 aa12.86□□□□□ -0.35
VARS2-212ENST00000542001 TGFAP01135 160 aa12.86□□□□□ -0.35
VARS2-212ENST00000542001 OR10J3Q5JRS4 329 aa12.86□□□□□ -0.35
VARS2-212ENST00000542001 PVRIGQ6DKI7 326 aa12.86□□□□□ -0.35
VARS2-212ENST00000542001 C12orf54Q6X4T0 127 aa12.86□□□□□ -0.35
VARS2-212ENST00000542001 DDB2Q92466 427 aa12.86□□□□□ -0.35
VARS2-212ENST00000542001 HAX1O00165 279 aa12.85□□□□□ -0.35
VARS2-212ENST00000542001 SAA4P35542 130 aa12.85□□□□□ -0.35
VARS2-212ENST00000542001 FXYD5Q96DB9 178 aa12.85□□□□□ -0.35
VARS2-212ENST00000542001 JKAMPQ9P055 326 aa12.85□□□□□ -0.35
VARS2-212ENST00000542001 FABP5P3A8MUU1 101 aa12.85□□□□□ -0.35
VARS2-212ENST00000542001 H3BVH4 76 aa12.85□□□□□ -0.35
VARS2-212ENST00000542001 TEX36Q5VZQ5 186 aa12.85□□□□□ -0.35
VARS2-212ENST00000542001 TYMSP04818 313 aa12.85□□□□□ -0.35
VARS2-212ENST00000542001 LEPP41159 167 aa12.85□□□□□ -0.35
VARS2-212ENST00000542001 NDUFA3O95167 84 aa12.84□□□□□ -0.35
VARS2-212ENST00000542001 DNLZQ5SXM8 178 aa12.84□□□□□ -0.35
VARS2-212ENST00000542001 IGFL2Q6UWQ7 119 aa12.84□□□□□ -0.35
VARS2-212ENST00000542001 IGLC7A0M8Q6 106 aa12.84□□□□□ -0.35
VARS2-212ENST00000542001 K7ENP7 123 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms