RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 CITED4Q96RK1 184 aa13.89□□□□□ -0.19
VPS33A-205ENST00000541169 SPATA25Q9BR10 227 aa13.89□□□□□ -0.19
VPS33A-205ENST00000541169 hCG_2014768A0A024R1R8 64 aa13.88□□□□□ -0.19
VPS33A-205ENST00000541169 C4BPBP20851 252 aa13.88□□□□□ -0.19
VPS33A-205ENST00000541169 PSG9Q00887 426 aa13.88□□□□□ -0.19
VPS33A-205ENST00000541169 GCSAMLQ5JQS6 135 aa13.88□□□□□ -0.19
VPS33A-205ENST00000541169 MORN5Q5VZ52 161 aa13.88□□□□□ -0.19
VPS33A-205ENST00000541169 EBLN2Q6P2I7 272 aa13.88□□□□□ -0.19
VPS33A-205ENST00000541169 Q6ZWC4 215 aa13.88□□□□□ -0.19
VPS33A-205ENST00000541169 OR10G4Q8NGN3 311 aa13.88□□□□□ -0.19
VPS33A-205ENST00000541169 OR10G9Q8NGN4 311 aa13.88□□□□□ -0.19
VPS33A-205ENST00000541169 OR10G7Q8NGN6 311 aa13.88□□□□□ -0.19
VPS33A-205ENST00000541169 TM2D3Q9BRN9 247 aa13.88□□□□□ -0.19
VPS33A-205ENST00000541169 PFDN1O60925 122 aa13.87□□□□□ -0.19
VPS33A-205ENST00000541169 PQLC2Q6ZP29 291 aa13.87□□□□□ -0.19
VPS33A-205ENST00000541169 CSTL1Q9H114 145 aa13.87□□□□□ -0.19
VPS33A-205ENST00000541169 OR51M1Q9H341 326 aa13.87□□□□□ -0.19
VPS33A-205ENST00000541169 SAV1Q9H4B6 383 aaPredicted RBP13.87□□□□□ -0.19
VPS33A-205ENST00000541169 ZNF331Q9NQX6 463 aaPredicted RBP13.87□□□□□ -0.19
VPS33A-205ENST00000541169 DNAH3Q8TD57 4116 aa13.87□□□□□ -0.19
VPS33A-205ENST00000541169 TRBV19A0A075B6N1 114 aa13.86□□□□□ -0.19
VPS33A-205ENST00000541169 TRAV5A0A0B4J249 113 aa13.86□□□□□ -0.19
VPS33A-205ENST00000541169 BCL2L11O43521 198 aa13.86□□□□□ -0.19
VPS33A-205ENST00000541169 HLA-DRB4P13762 266 aa13.86□□□□□ -0.19
VPS33A-205ENST00000541169 ACTL10Q5JWF8 245 aa13.86□□□□□ -0.19
VPS33A-205ENST00000541169 MIR17HGQ75NE6 70 aa13.86□□□□□ -0.19
VPS33A-205ENST00000541169 TRPT1Q86TN4 253 aaKnown RBP13.86□□□□□ -0.19
VPS33A-205ENST00000541169 FAM167A-AS1Q96KT0 104 aa13.86□□□□□ -0.19
VPS33A-205ENST00000541169 C17orf77Q96MU5 243 aa13.86□□□□□ -0.19
VPS33A-205ENST00000541169 PAXXQ9BUH6 204 aa13.86□□□□□ -0.19
VPS33A-205ENST00000541169 SLC25A2Q9BXI2 301 aa13.86□□□□□ -0.19
VPS33A-205ENST00000541169 TP53TG1Q9Y2A0 90 aa13.86□□□□□ -0.19
VPS33A-205ENST00000541169 HLA-DRB4X5D2U9 266 aa13.86□□□□□ -0.19
VPS33A-205ENST00000541169 DUSP14O95147 198 aaKnown RBP13.85□□□□□ -0.19
VPS33A-205ENST00000541169 PSG3Q16557 428 aa13.85□□□□□ -0.19
VPS33A-205ENST00000541169 SAT2Q96F10 170 aaPredicted RBP13.85□□□□□ -0.19
VPS33A-205ENST00000541169 C1QTNF4Q9BXJ3 329 aa13.85□□□□□ -0.19
VPS33A-205ENST00000541169 CYTL1Q9NRR1 136 aa13.85□□□□□ -0.19
VPS33A-205ENST00000541169 PRELID1Q9Y255 219 aa13.85□□□□□ -0.19
VPS33A-205ENST00000541169 H3BMM0 161 aa13.84□□□□□ -0.19
VPS33A-205ENST00000541169 OR7C2O60412 319 aa13.84□□□□□ -0.19
VPS33A-205ENST00000541169 NBEAP1P0C6P0 100 aa13.84□□□□□ -0.19
VPS33A-205ENST00000541169 CDC34P49427 236 aaPredicted RBP13.84□□□□□ -0.19
VPS33A-205ENST00000541169 EIF5AL1Q6IS14 154 aaKnown RBP13.84□□□□□ -0.19
VPS33A-205ENST00000541169 LYPD1Q8N2G4 141 aa13.84□□□□□ -0.19
VPS33A-205ENST00000541169 MRPL53Q96EL3 112 aaKnown RBP13.84□□□□□ -0.19
VPS33A-205ENST00000541169 ASCL2Q99929 193 aa13.84□□□□□ -0.19
VPS33A-205ENST00000541169 ACTR3CQ9C0K3 210 aaPredicted RBP13.84□□□□□ -0.19
VPS33A-205ENST00000541169 AAMDCQ9H7C9 122 aa13.84□□□□□ -0.19
VPS33A-205ENST00000541169 TRAV8-2A0A0B4J237 113 aa13.83□□□□□ -0.2
VPS33A-205ENST00000541169 H3BQ15 152 aa13.83□□□□□ -0.2
VPS33A-205ENST00000541169 SEC11BP0C7V7 166 aa13.83□□□□□ -0.2
VPS33A-205ENST00000541169 RPL35AP18077 110 aaKnown RBP13.83□□□□□ -0.2
VPS33A-205ENST00000541169 ZNF124Q15973 351 aa13.83□□□□□ -0.2
VPS33A-205ENST00000541169 AKR1C8PQ5T2L2 129 aa13.83□□□□□ -0.2
VPS33A-205ENST00000541169 TMUB2Q71RG4 321 aa13.83□□□□□ -0.2
VPS33A-205ENST00000541169 ZNF738Q8NE65 137 aa13.83□□□□□ -0.2
VPS33A-205ENST00000541169 RNF141Q8WVD5 230 aa13.83□□□□□ -0.2
VPS33A-205ENST00000541169 ZNF471Q9BX82 626 aaPredicted RBP13.83□□□□□ -0.2
VPS33A-205ENST00000541169 ZNF586Q9NXT0 402 aa13.83□□□□□ -0.2
VPS33A-205ENST00000541169 U3KQK5 164 aa13.83□□□□□ -0.2
VPS33A-205ENST00000541169 A0A0J9YX75 114 aa13.82□□□□□ -0.2
VPS33A-205ENST00000541169 KNCNA6PVL3 124 aa13.82□□□□□ -0.2
VPS33A-205ENST00000541169 UMAD1C9J7I0 102 aa13.82□□□□□ -0.2
VPS33A-205ENST00000541169 TPT1P13693 172 aaKnown RBP13.82□□□□□ -0.2
VPS33A-205ENST00000541169 RAB2AP61019 212 aa13.82□□□□□ -0.2
VPS33A-205ENST00000541169 ZFP69Q49AA0 526 aa13.82□□□□□ -0.2
VPS33A-205ENST00000541169 RPP25LQ8N5L8 163 aaKnown RBP13.82□□□□□ -0.2
VPS33A-205ENST00000541169 SH3BGRL3Q9H299 93 aa13.82□□□□□ -0.2
VPS33A-205ENST00000541169 PYYP10082 97 aa13.81□□□□□ -0.2
VPS33A-205ENST00000541169 UBE2L3P68036 154 aaKnown RBP13.81□□□□□ -0.2
VPS33A-205ENST00000541169 FAM122CQ6P4D5 195 aa13.81□□□□□ -0.2
VPS33A-205ENST00000541169 BAP18Q8IXM2 172 aa13.81□□□□□ -0.2
VPS33A-205ENST00000541169 STOML3Q8TAV4 291 aa13.81□□□□□ -0.2
VPS33A-205ENST00000541169 FXYD5Q96DB9 178 aa13.81□□□□□ -0.2
VPS33A-205ENST00000541169 AMBPP02760 352 aa13.8□□□□□ -0.2
VPS33A-205ENST00000541169 STAG3L2P0CL84 134 aa13.8□□□□□ -0.2
VPS33A-205ENST00000541169 STAG3L3P0CL85 134 aa13.8□□□□□ -0.2
VPS33A-205ENST00000541169 FAM74A1Q5RGS3 127 aa13.8□□□□□ -0.2
VPS33A-205ENST00000541169 RNF182Q8N6D2 247 aa13.8□□□□□ -0.2
VPS33A-205ENST00000541169 RAB24Q969Q5 203 aa13.8□□□□□ -0.2
VPS33A-205ENST00000541169 RPUSD4Q96CM3 377 aaKnown RBP13.8□□□□□ -0.2
VPS33A-205ENST00000541169 C20orf173Q96LM9 149 aa13.8□□□□□ -0.2
VPS33A-205ENST00000541169 A8MTW9 85 aa13.79□□□□□ -0.2
VPS33A-205ENST00000541169 CXorf1O96002 111 aa13.79□□□□□ -0.2
VPS33A-205ENST00000541169 CA1P00915 261 aaPredicted RBP13.79□□□□□ -0.2
VPS33A-205ENST00000541169 LGALSLQ3ZCW2 172 aaPredicted RBP13.79□□□□□ -0.2
VPS33A-205ENST00000541169 DPPA3Q6W0C5 159 aa13.79□□□□□ -0.2
VPS33A-205ENST00000541169 OR8A1Q8NGG7 326 aa13.79□□□□□ -0.2
VPS33A-205ENST00000541169 OR10J6PQ8NGY7 276 aa13.79□□□□□ -0.2
VPS33A-205ENST00000541169 BLNKQ8WV28 456 aa13.79□□□□□ -0.2
VPS33A-205ENST00000541169 RNF183Q96D59 192 aa13.79□□□□□ -0.2
VPS33A-205ENST00000541169 RCHY1Q96PM5 261 aa13.79□□□□□ -0.2
VPS33A-205ENST00000541169 RFNGQ9Y644 331 aa13.79□□□□□ -0.2
VPS33A-205ENST00000541169 CTXND1A0A1B0GTU2 59 aa13.78□□□□□ -0.2
VPS33A-205ENST00000541169 A0A1B0GVG6 124 aa13.78□□□□□ -0.2
VPS33A-205ENST00000541169 SLC17A3O00476 420 aa13.78□□□□□ -0.2
VPS33A-205ENST00000541169 SPRY2O43597 315 aa13.78□□□□□ -0.2
VPS33A-205ENST00000541169 NDUFB4O95168 129 aa13.78□□□□□ -0.2
VPS33A-205ENST00000541169 OR10J4P0C629 311 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms