RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 DPM3Q9P2X0 92 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 MSRB2Q9Y3D2 182 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 HECTD1Q9ULT8 2610 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 TET2Q6N021 2002 aaPredicted RBP4.25□□□□□ -1.73
PROM1-220ENST00000540805 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.25□□□□□ -1.73
PROM1-220ENST00000540805 C2orf70A6NJV1 201 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 PRR20EP86478 221 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 PRR20CP86479 221 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 PRR20DP86480 221 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 PRR20BP86481 221 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 PRR20AP86496 221 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 RRN3P1Q2M238 152 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 DEFB121Q5J5C9 76 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 SLC25A34Q6PIV7 304 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 OR13A1Q8NGR1 328 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 NPIPB3Q92617 1050 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 IGF2BP2-AS1Q96M15 143 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 NABP2Q9BQ15 211 aa4.25□□□□□ -1.73
PROM1-220ENST00000540805 TRAV3A0A0B4J244 114 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 C7orf71A4D174 169 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 GGTLC3B5MD39 225 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 WT1P19544 449 aaPredicted RBP4.24□□□□□ -1.73
PROM1-220ENST00000540805 INSL3P51460 131 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 FAM106AQ4KMX7 169 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 SPANXN1Q5VSR9 72 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 C12orf54Q6X4T0 127 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 PRNTQ86SH4 94 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 TMEM219Q86XT9 240 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 MDS2Q8NDY4 140 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 Q8TCH9 128 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 METRNQ9UJH8 293 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 MOSP00540 346 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 PRSS1P07477 247 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 DEFB125Q8N687 156 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 ITLN2Q8WWU7 325 aaPredicted RBP4.24□□□□□ -1.73
PROM1-220ENST00000540805 TSSC4Q9Y5U2 329 aaPredicted RBP4.24□□□□□ -1.73
PROM1-220ENST00000540805 CENPEQ02224 2701 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 PLXNB1O43157 2135 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 A0A1W2PRE2 83 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 C15orf61A6NNL5 157 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 RPL7P18124 248 aaKnown RBP4.24□□□□□ -1.73
PROM1-220ENST00000540805 FOXA3P55318 350 aaPredicted RBP4.24□□□□□ -1.73
PROM1-220ENST00000540805 CKS1BP61024 79 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 NSUN5P1Q3KNT7 163 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 FAM74A4Q5TZK3 123 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 WDR82Q6UXN9 313 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 TMEM191AQ9H0A3 160 aa4.24□□□□□ -1.73
PROM1-220ENST00000540805 OR5AL1P0C617 328 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 GPR183P32249 361 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 Q1RN00 199 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 FAM231DQ6ZW35 169 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 TEX45Q8NA69 505 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 NUP35Q8NFH5 326 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 OR4C13Q8NGP0 309 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 ZNF503Q96F45 646 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 C18orf15Q96N68 181 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 METTL26Q96S19 204 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 LRBAP50851 2863 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 PGPA6NDG6 321 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 FNDC10F2Z333 226 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 IL4P05112 153 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 KIR2DL2P43627 348 aaPredicted RBP4.23□□□□□ -1.73
PROM1-220ENST00000540805 KIR3DS1Q14943 382 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 C3orf36Q3SXR2 165 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 ZNF672Q499Z4 452 aaPredicted RBP4.23□□□□□ -1.73
PROM1-220ENST00000540805 GDF5OSQ5U4N7 250 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 FAM71F2Q6NXP2 309 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 Q6ZR03 302 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 GCSAMQ8N6F7 178 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 C8orf46Q8TAG6 207 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 MBD6Q96DN6 1003 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 PEF1Q9UBV8 284 aaKnown RBP4.23□□□□□ -1.73
PROM1-220ENST00000540805 CUBNO60494 3623 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 IQCF6A8MYZ5 107 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 TM4SF5O14894 197 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 CD5LO43866 347 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 C8orf88P0DMB2 117 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 SRD5A1P18405 259 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 HSPE1P61604 102 aaKnown RBP4.23□□□□□ -1.73
PROM1-220ENST00000540805 TMEM78Q5T7P6 136 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 SH2D6Q7Z4S9 175 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 ZNF329Q86UD4 541 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 C1orf162Q8NEQ5 155 aaPredicted RBP4.23□□□□□ -1.73
PROM1-220ENST00000540805 ATP6V0BQ99437 205 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 HIGD1AQ9Y241 93 aa4.23□□□□□ -1.73
PROM1-220ENST00000540805 A0A0G2JNJ9 132 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 RNF223E7ERA6 249 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 C15orf65H3BRN8 121 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 SYS1-DBNDD2H3BUS1 97 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 PROP1O75360 226 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 LEPROTL1O95214 131 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 P01737 135 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 PPIFP30405 207 aaKnown RBP4.22□□□□□ -1.73
PROM1-220ENST00000540805 MFAP4P55083 255 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 FXYD7P58549 80 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 PLP1P60201 277 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 HIST1H1AQ02539 215 aaPredicted RBP4.22□□□□□ -1.73
PROM1-220ENST00000540805 ATP5L2Q7Z4Y8 100 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 LINC00479Q96M42 142 aa4.22□□□□□ -1.73
PROM1-220ENST00000540805 PAXXQ9BUH6 204 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms