RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 MIR17HGQ75NE6 70 aa14.33□□□□□ -0.12
DDX55-207ENST00000540763 TRPT1Q86TN4 253 aaKnown RBP14.33□□□□□ -0.12
DDX55-207ENST00000540763 FAM167A-AS1Q96KT0 104 aa14.33□□□□□ -0.12
DDX55-207ENST00000540763 ASCL2Q99929 193 aa14.33□□□□□ -0.12
DDX55-207ENST00000540763 SPATA25Q9BR10 227 aa14.33□□□□□ -0.12
DDX55-207ENST00000540763 ZMAT4Q9H898 229 aa14.33□□□□□ -0.12
DDX55-207ENST00000540763 ZNF331Q9NQX6 463 aaPredicted RBP14.33□□□□□ -0.12
DDX55-207ENST00000540763 CYTL1Q9NRR1 136 aa14.33□□□□□ -0.12
DDX55-207ENST00000540763 AGRNO00468 2067 aa14.33□□□□□ -0.12
DDX55-207ENST00000540763 TRAV8-2A0A0B4J237 113 aa14.32□□□□□ -0.12
DDX55-207ENST00000540763 HLA-DRB4P13762 266 aa14.32□□□□□ -0.12
DDX55-207ENST00000540763 KHDC3LQ587J8 217 aa14.32□□□□□ -0.12
DDX55-207ENST00000540763 LINC00052Q96N35 136 aa14.32□□□□□ -0.12
DDX55-207ENST00000540763 CLUHP3Q96NS8 147 aa14.32□□□□□ -0.12
DDX55-207ENST00000540763 SAV1Q9H4B6 383 aaPredicted RBP14.32□□□□□ -0.12
DDX55-207ENST00000540763 HLA-DRB4X5D2U9 266 aa14.32□□□□□ -0.12
DDX55-207ENST00000540763 KANTRA0A1W2PQU2 76 aa14.31□□□□□ -0.12
DDX55-207ENST00000540763 H3BQ15 152 aa14.31□□□□□ -0.12
DDX55-207ENST00000540763 BCL2L11O43521 198 aa14.31□□□□□ -0.12
DDX55-207ENST00000540763 SPP1P10451 314 aa14.31□□□□□ -0.12
DDX55-207ENST00000540763 ACTL10Q5JWF8 245 aa14.31□□□□□ -0.12
DDX55-207ENST00000540763 LRRC20Q8TCA0 184 aa14.31□□□□□ -0.12
DDX55-207ENST00000540763 SAT2Q96F10 170 aaPredicted RBP14.31□□□□□ -0.12
DDX55-207ENST00000540763 HYLS1Q96M11 299 aa14.31□□□□□ -0.12
DDX55-207ENST00000540763 OR51M1Q9H341 326 aa14.31□□□□□ -0.12
DDX55-207ENST00000540763 RFNGQ9Y644 331 aa14.31□□□□□ -0.12
DDX55-207ENST00000540763 TRBV19A0A075B6N1 114 aa14.3□□□□□ -0.12
DDX55-207ENST00000540763 KNCNA6PVL3 124 aa14.3□□□□□ -0.12
DDX55-207ENST00000540763 RAB2AP61019 212 aa14.3□□□□□ -0.12
DDX55-207ENST00000540763 TMEM41BQ5BJD5 291 aa14.3□□□□□ -0.12
DDX55-207ENST00000540763 MORN3Q6PF18 240 aaPredicted RBP14.3□□□□□ -0.12
DDX55-207ENST00000540763 Q6ZWC4 215 aa14.3□□□□□ -0.12
DDX55-207ENST00000540763 OR10G4Q8NGN3 311 aa14.3□□□□□ -0.12
DDX55-207ENST00000540763 OR10G9Q8NGN4 311 aa14.3□□□□□ -0.12
DDX55-207ENST00000540763 OR10G7Q8NGN6 311 aa14.3□□□□□ -0.12
DDX55-207ENST00000540763 C20orf173Q96LM9 149 aa14.3□□□□□ -0.12
DDX55-207ENST00000540763 SH3BGRL3Q9H299 93 aa14.3□□□□□ -0.12
DDX55-207ENST00000540763 ZNF586Q9NXT0 402 aa14.3□□□□□ -0.12
DDX55-207ENST00000540763 A0A1B0GVG6 124 aa14.29□□□□□ -0.12
DDX55-207ENST00000540763 A0A1W2PPV4 95 aa14.29□□□□□ -0.12
DDX55-207ENST00000540763 H3BMM0 161 aa14.29□□□□□ -0.12
DDX55-207ENST00000540763 PYYP10082 97 aa14.29□□□□□ -0.12
DDX55-207ENST00000540763 RPL35AP18077 110 aaKnown RBP14.29□□□□□ -0.12
DDX55-207ENST00000540763 EIF5AP63241 154 aaKnown RBP14.29□□□□□ -0.12
DDX55-207ENST00000540763 PSG3Q16557 428 aa14.29□□□□□ -0.12
DDX55-207ENST00000540763 EBLN2Q6P2I7 272 aa14.29□□□□□ -0.12
DDX55-207ENST00000540763 PQLC2Q6ZP29 291 aa14.29□□□□□ -0.12
DDX55-207ENST00000540763 PAXXQ9BUH6 204 aa14.29□□□□□ -0.12
DDX55-207ENST00000540763 CSTL1Q9H114 145 aa14.29□□□□□ -0.12
DDX55-207ENST00000540763 TP53TG1Q9Y2A0 90 aa14.29□□□□□ -0.12
DDX55-207ENST00000540763 DNAH9Q9NYC9 4486 aa14.28□□□□□ -0.12
DDX55-207ENST00000540763 A0A0J9YX75 114 aa14.28□□□□□ -0.12
DDX55-207ENST00000540763 SLC17A3O00476 420 aa14.28□□□□□ -0.12
DDX55-207ENST00000540763 OR7C2O60412 319 aa14.28□□□□□ -0.12
DDX55-207ENST00000540763 CDC34P49427 236 aaPredicted RBP14.28□□□□□ -0.12
DDX55-207ENST00000540763 TMUB2Q71RG4 321 aa14.28□□□□□ -0.12
DDX55-207ENST00000540763 A8MTW9 85 aa14.27□□□□□ -0.13
DDX55-207ENST00000540763 PFDN1O60925 122 aa14.27□□□□□ -0.13
DDX55-207ENST00000540763 NBEAP1P0C6P0 100 aa14.27□□□□□ -0.13
DDX55-207ENST00000540763 NUTF2P61970 127 aaKnown RBP14.27□□□□□ -0.13
DDX55-207ENST00000540763 PSG9Q00887 426 aa14.27□□□□□ -0.13
DDX55-207ENST00000540763 FAM122CQ6P4D5 195 aa14.27□□□□□ -0.13
DDX55-207ENST00000540763 RPP25LQ8N5L8 163 aaKnown RBP14.27□□□□□ -0.13
DDX55-207ENST00000540763 RNF182Q8N6D2 247 aa14.27□□□□□ -0.13
DDX55-207ENST00000540763 ZNF738Q8NE65 137 aa14.27□□□□□ -0.13
DDX55-207ENST00000540763 FXYD5Q96DB9 178 aa14.27□□□□□ -0.13
DDX55-207ENST00000540763 MRPL53Q96EL3 112 aaKnown RBP14.27□□□□□ -0.13
DDX55-207ENST00000540763 U3KQK5 164 aa14.27□□□□□ -0.13
DDX55-207ENST00000540763 COL7A1Q02388 2944 aa14.27□□□□□ -0.13
DDX55-207ENST00000540763 GDF5OSQ5U4N7 250 aa14.26□□□□□ -0.13
DDX55-207ENST00000540763 RNF141Q8WVD5 230 aa14.26□□□□□ -0.13
DDX55-207ENST00000540763 ZNF503Q96F45 646 aa14.26□□□□□ -0.13
DDX55-207ENST00000540763 RCHY1Q96PM5 261 aa14.26□□□□□ -0.13
DDX55-207ENST00000540763 ZNF471Q9BX82 626 aaPredicted RBP14.26□□□□□ -0.13
DDX55-207ENST00000540763 PRELID1Q9Y255 219 aa14.26□□□□□ -0.13
DDX55-207ENST00000540763 DUSP14O95147 198 aaKnown RBP14.25□□□□□ -0.13
DDX55-207ENST00000540763 NDUFB4O95168 129 aa14.25□□□□□ -0.13
DDX55-207ENST00000540763 SEC11BP0C7V7 166 aa14.25□□□□□ -0.13
DDX55-207ENST00000540763 STAG3L2P0CL84 134 aa14.25□□□□□ -0.13
DDX55-207ENST00000540763 STAG3L3P0CL85 134 aa14.25□□□□□ -0.13
DDX55-207ENST00000540763 UBE2L3P68036 154 aaKnown RBP14.25□□□□□ -0.13
DDX55-207ENST00000540763 LGALSLQ3ZCW2 172 aaPredicted RBP14.25□□□□□ -0.13
DDX55-207ENST00000540763 AKR1C8PQ5T2L2 129 aa14.25□□□□□ -0.13
DDX55-207ENST00000540763 IGFL4Q6B9Z1 124 aa14.25□□□□□ -0.13
DDX55-207ENST00000540763 STOML3Q8TAV4 291 aa14.25□□□□□ -0.13
DDX55-207ENST00000540763 ACTR3CQ9C0K3 210 aaPredicted RBP14.25□□□□□ -0.13
DDX55-207ENST00000540763 H3BTX0 84 aa14.24□□□□□ -0.13
DDX55-207ENST00000540763 CA1P00915 261 aaPredicted RBP14.24□□□□□ -0.13
DDX55-207ENST00000540763 SNRPCP09234 159 aaKnown RBP14.24□□□□□ -0.13
DDX55-207ENST00000540763 OR10J4P0C629 311 aa14.24□□□□□ -0.13
DDX55-207ENST00000540763 TPT1P13693 172 aaKnown RBP14.24□□□□□ -0.13
DDX55-207ENST00000540763 HLA-DMBP28068 263 aa14.24□□□□□ -0.13
DDX55-207ENST00000540763 LYPD1Q8N2G4 141 aa14.24□□□□□ -0.13
DDX55-207ENST00000540763 RAB24Q969Q5 203 aa14.24□□□□□ -0.13
DDX55-207ENST00000540763 RPUSD4Q96CM3 377 aaKnown RBP14.24□□□□□ -0.13
DDX55-207ENST00000540763 C1QTNF4Q9BXJ3 329 aa14.24□□□□□ -0.13
DDX55-207ENST00000540763 AAMDCQ9H7C9 122 aa14.24□□□□□ -0.13
DDX55-207ENST00000540763 F6UB75 175 aa14.23□□□□□ -0.13
DDX55-207ENST00000540763 DEFB1P60022 68 aa14.23□□□□□ -0.13
DDX55-207ENST00000540763 ZFP69Q49AA0 526 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms