RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 ATOH7Q8N100 152 aa13.45□□□□□ -0.26
PCDHB17P-201ENST00000539533 KLHDC1Q8N7A1 406 aa13.45□□□□□ -0.26
PCDHB17P-201ENST00000539533 ZNF738Q8NE65 137 aa13.45□□□□□ -0.26
PCDHB17P-201ENST00000539533 NPIPB3Q92617 1050 aa13.45□□□□□ -0.26
PCDHB17P-201ENST00000539533 SLC25A33Q9BSK2 321 aa13.45□□□□□ -0.26
PCDHB17P-201ENST00000539533 TGFAP01135 160 aa13.45□□□□□ -0.26
PCDHB17P-201ENST00000539533 APCSP02743 223 aa13.45□□□□□ -0.26
PCDHB17P-201ENST00000539533 ETFRF1Q6IPR1 90 aa13.45□□□□□ -0.26
PCDHB17P-201ENST00000539533 C1RLQ9NZP8 487 aa13.45□□□□□ -0.26
PCDHB17P-201ENST00000539533 IZUMO1RA6ND01 250 aa13.44□□□□□ -0.26
PCDHB17P-201ENST00000539533 CA1P00915 261 aaPredicted RBP13.44□□□□□ -0.26
PCDHB17P-201ENST00000539533 TSPOP30536 169 aa13.44□□□□□ -0.26
PCDHB17P-201ENST00000539533 NIT1Q86X76 327 aa13.44□□□□□ -0.26
PCDHB17P-201ENST00000539533 PIFOQ8TCI5 191 aa13.44□□□□□ -0.26
PCDHB17P-201ENST00000539533 ARPC1AQ92747 370 aa13.44□□□□□ -0.26
PCDHB17P-201ENST00000539533 GATA3P23771 443 aa13.44□□□□□ -0.26
PCDHB17P-201ENST00000539533 RNF151Q2KHN1 245 aa13.44□□□□□ -0.26
PCDHB17P-201ENST00000539533 MAJINQ3KP22 176 aa13.44□□□□□ -0.26
PCDHB17P-201ENST00000539533 ASPHD1Q5U4P2 390 aa13.44□□□□□ -0.26
PCDHB17P-201ENST00000539533 KRTAP1-3Q8IUG1 177 aa13.44□□□□□ -0.26
PCDHB17P-201ENST00000539533 NHLRC2Q8NBF2 726 aa13.44□□□□□ -0.26
PCDHB17P-201ENST00000539533 TSKUQ8WUA8 353 aa13.44□□□□□ -0.26
PCDHB17P-201ENST00000539533 Q96MF0 132 aa13.44□□□□□ -0.26
PCDHB17P-201ENST00000539533 SRSF8Q9BRL6 282 aaKnown RBP13.44□□□□□ -0.26
PCDHB17P-201ENST00000539533 IGHV7-81A0A0B4J1V7 117 aa13.43□□□□□ -0.26
PCDHB17P-201ENST00000539533 CRYGCP07315 174 aa13.43□□□□□ -0.26
PCDHB17P-201ENST00000539533 TMEM219Q86XT9 240 aa13.43□□□□□ -0.26
PCDHB17P-201ENST00000539533 FAM19A2Q8N3H0 131 aa13.43□□□□□ -0.26
PCDHB17P-201ENST00000539533 MEGF9Q9H1U4 602 aa13.43□□□□□ -0.26
PCDHB17P-201ENST00000539533 ZNF469Q96JG9 3925 aaPredicted RBP13.43□□□□□ -0.26
PCDHB17P-201ENST00000539533 SH2D7A6NKC9 451 aaPredicted RBP13.43□□□□□ -0.26
PCDHB17P-201ENST00000539533 NTF3P20783 257 aa13.43□□□□□ -0.26
PCDHB17P-201ENST00000539533 UBE2L3P68036 154 aaKnown RBP13.43□□□□□ -0.26
PCDHB17P-201ENST00000539533 MORN5Q5VZ52 161 aa13.43□□□□□ -0.26
PCDHB17P-201ENST00000539533 FAM167A-AS1Q96KT0 104 aa13.43□□□□□ -0.26
PCDHB17P-201ENST00000539533 SLC25A2Q9BXI2 301 aa13.43□□□□□ -0.26
PCDHB17P-201ENST00000539533 MRPL32Q9BYC8 188 aaKnown RBP13.43□□□□□ -0.26
PCDHB17P-201ENST00000539533 ZNF331Q9NQX6 463 aaPredicted RBP13.43□□□□□ -0.26
PCDHB17P-201ENST00000539533 CSPG4Q6UVK1 2322 aa13.42□□□□□ -0.26
PCDHB17P-201ENST00000539533 CR1P17927 2039 aa13.42□□□□□ -0.26
PCDHB17P-201ENST00000539533 IGKV1D-37A0A075B6S9 117 aa13.42□□□□□ -0.26
PCDHB17P-201ENST00000539533 TRAV5A0A0B4J249 113 aa13.42□□□□□ -0.26
PCDHB17P-201ENST00000539533 SLAQ13239 276 aa13.42□□□□□ -0.26
PCDHB17P-201ENST00000539533 BORCS7Q96B45 105 aa13.42□□□□□ -0.26
PCDHB17P-201ENST00000539533 MBD6Q96DN6 1003 aa13.42□□□□□ -0.26
PCDHB17P-201ENST00000539533 LINC00479Q96M42 142 aa13.42□□□□□ -0.26
PCDHB17P-201ENST00000539533 RASL11BQ9BPW5 248 aa13.42□□□□□ -0.26
PCDHB17P-201ENST00000539533 MRPS16Q9Y3D3 137 aaKnown RBP13.42□□□□□ -0.26
PCDHB17P-201ENST00000539533 EGR2P11161 476 aaPredicted RBP13.42□□□□□ -0.26
PCDHB17P-201ENST00000539533 OR4C5Q8NGB2 326 aa13.42□□□□□ -0.26
PCDHB17P-201ENST00000539533 PSMB11A5LHX3 300 aa13.41□□□□□ -0.26
PCDHB17P-201ENST00000539533 CORTO00230 105 aa13.41□□□□□ -0.26
PCDHB17P-201ENST00000539533 HLA-DRB1P01911 266 aa13.41□□□□□ -0.26
PCDHB17P-201ENST00000539533 IGHV4-31P0DP07 118 aa13.41□□□□□ -0.26
PCDHB17P-201ENST00000539533 C18orf32Q8TCD1 76 aa13.41□□□□□ -0.26
PCDHB17P-201ENST00000539533 LCN12Q6JVE5 192 aa13.4□□□□□ -0.26
PCDHB17P-201ENST00000539533 WIPF2Q8TF74 440 aaPredicted RBP13.4□□□□□ -0.26
PCDHB17P-201ENST00000539533 MRPL27Q9P0M9 148 aaKnown RBP13.4□□□□□ -0.26
PCDHB17P-201ENST00000539533 PRRC2AP48634 2157 aaKnown RBP13.4□□□□□ -0.26
PCDHB17P-201ENST00000539533 I3L2K1 104 aa13.4□□□□□ -0.26
PCDHB17P-201ENST00000539533 RASL11AQ6T310 242 aa13.4□□□□□ -0.26
PCDHB17P-201ENST00000539533 THAP8Q8NA92 274 aa13.4□□□□□ -0.26
PCDHB17P-201ENST00000539533 OR2D3Q8NGH3 330 aa13.4□□□□□ -0.26
PCDHB17P-201ENST00000539533 GSX1Q9H4S2 264 aaPredicted RBP13.4□□□□□ -0.26
PCDHB17P-201ENST00000539533 TEX15Q9BXT5 2789 aa13.4□□□□□ -0.26
PCDHB17P-201ENST00000539533 TMEM116Q8NCL8 245 aa13.39□□□□□ -0.27
PCDHB17P-201ENST00000539533 ZNF355PQ9NSJ1 428 aa13.39□□□□□ -0.27
PCDHB17P-201ENST00000539533 PDZD2O15018 2839 aa13.39□□□□□ -0.27
PCDHB17P-201ENST00000539533 ITPR2Q14571 2701 aa13.39□□□□□ -0.27
PCDHB17P-201ENST00000539533 TCRBV4S1A1TA0A5B7 111 aa13.39□□□□□ -0.27
PCDHB17P-201ENST00000539533 LINC01548A6NM66 108 aa13.39□□□□□ -0.27
PCDHB17P-201ENST00000539533 PRSS57Q6UWY2 283 aa13.39□□□□□ -0.27
PCDHB17P-201ENST00000539533 FAM231DQ6ZW35 169 aa13.39□□□□□ -0.27
PCDHB17P-201ENST00000539533 C5orf56Q8N8D9 126 aa13.39□□□□□ -0.27
PCDHB17P-201ENST00000539533 PYYP10082 97 aa13.38□□□□□ -0.27
PCDHB17P-201ENST00000539533 LY6EQ16553 131 aa13.38□□□□□ -0.27
PCDHB17P-201ENST00000539533 TTC9CQ8N5M4 171 aa13.38□□□□□ -0.27
PCDHB17P-201ENST00000539533 FANCD2OSQ96PS1 177 aa13.38□□□□□ -0.27
PCDHB17P-201ENST00000539533 TNFRSF19Q9NS68 423 aa13.38□□□□□ -0.27
PCDHB17P-201ENST00000539533 NPIPB5A8MRT5 1133 aa13.38□□□□□ -0.27
PCDHB17P-201ENST00000539533 K7EIM0 57 aa13.38□□□□□ -0.27
PCDHB17P-201ENST00000539533 PMCHL1Q16048 86 aa13.38□□□□□ -0.27
PCDHB17P-201ENST00000539533 GDF5OSQ5U4N7 250 aa13.38□□□□□ -0.27
PCDHB17P-201ENST00000539533 ZNF329Q86UD4 541 aa13.38□□□□□ -0.27
PCDHB17P-201ENST00000539533 H3BUX3 64 aa13.37□□□□□ -0.27
PCDHB17P-201ENST00000539533 J3QLI3 93 aa13.37□□□□□ -0.27
PCDHB17P-201ENST00000539533 PEX7O00628 323 aa13.37□□□□□ -0.27
PCDHB17P-201ENST00000539533 ATP6V0E1O15342 81 aa13.37□□□□□ -0.27
PCDHB17P-201ENST00000539533 COX7A2P2O60397 106 aa13.37□□□□□ -0.27
PCDHB17P-201ENST00000539533 BCL6BQ8N143 479 aaPredicted RBP13.37□□□□□ -0.27
PCDHB17P-201ENST00000539533 WFDC11Q8NEX6 87 aa13.37□□□□□ -0.27
PCDHB17P-201ENST00000539533 NUP35Q8NFH5 326 aa13.37□□□□□ -0.27
PCDHB17P-201ENST00000539533 GRAMD2BQ96HH9 432 aa13.37□□□□□ -0.27
PCDHB17P-201ENST00000539533 PAXXQ9BUH6 204 aa13.37□□□□□ -0.27
PCDHB17P-201ENST00000539533 CREBBPQ92793 2442 aa13.37□□□□□ -0.27
PCDHB17P-201ENST00000539533 CCDC168Q8NDH2 2452 aa13.37□□□□□ -0.27
PCDHB17P-201ENST00000539533 NUDT10Q8NFP7 164 aa13.37□□□□□ -0.27
PCDHB17P-201ENST00000539533 NUDT11Q96G61 164 aa13.37□□□□□ -0.27
PCDHB17P-201ENST00000539533 MOB4Q9Y3A3 225 aa13.37□□□□□ -0.27
PCDHB17P-201ENST00000539533 S4R3C0 116 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms