RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 GREB1LQ9C091 1923 aaPredicted RBP8.13□□□□□ -1.11
COL4A6-208ENST00000538570 A0A1B0GUS0 222 aa8.13□□□□□ -1.11
COL4A6-208ENST00000538570 OOSP1A8MZH6 123 aa8.13□□□□□ -1.11
COL4A6-208ENST00000538570 IGHV2-5P01817 119 aa8.13□□□□□ -1.11
COL4A6-208ENST00000538570 SUPT4H1P63272 117 aaKnown RBP8.13□□□□□ -1.11
COL4A6-208ENST00000538570 Q6ZVH6 145 aa8.13□□□□□ -1.11
COL4A6-208ENST00000538570 TMEM219Q86XT9 240 aa8.13□□□□□ -1.11
COL4A6-208ENST00000538570 H3BMG7 143 aa8.13□□□□□ -1.11
COL4A6-208ENST00000538570 IGHV3-53P01767 116 aa8.13□□□□□ -1.11
COL4A6-208ENST00000538570 TMEM14EPQ6UXP3 125 aa8.13□□□□□ -1.11
COL4A6-208ENST00000538570 LYPD1Q8N2G4 141 aa8.13□□□□□ -1.11
COL4A6-208ENST00000538570 RPP25LQ8N5L8 163 aaKnown RBP8.13□□□□□ -1.11
COL4A6-208ENST00000538570 TIMM21Q9BVV7 248 aa8.13□□□□□ -1.11
COL4A6-208ENST00000538570 NMSQ5H8A3 153 aa8.12□□□□□ -1.11
COL4A6-208ENST00000538570 UTF1Q5T230 341 aa8.12□□□□□ -1.11
COL4A6-208ENST00000538570 Q0VG73 95 aa8.12□□□□□ -1.11
COL4A6-208ENST00000538570 ZC2HC1BQ5TFG8 222 aa8.12□□□□□ -1.11
COL4A6-208ENST00000538570 PATJQ8NI35 1801 aa8.12□□□□□ -1.11
COL4A6-208ENST00000538570 IGHV2-70DA0A0C4DH43 119 aa8.12□□□□□ -1.11
COL4A6-208ENST00000538570 KLRD1Q13241 179 aa8.12□□□□□ -1.11
COL4A6-208ENST00000538570 C1orf159Q96HA4 380 aa8.12□□□□□ -1.11
COL4A6-208ENST00000538570 C14orf178Q8N769 122 aaPredicted RBP8.12□□□□□ -1.11
COL4A6-208ENST00000538570 Q8TAT8 98 aa8.12□□□□□ -1.11
COL4A6-208ENST00000538570 TRAV3A0A0B4J244 114 aa8.12□□□□□ -1.11
COL4A6-208ENST00000538570 IGKV1-5P01602 117 aa8.12□□□□□ -1.11
COL4A6-208ENST00000538570 NDPQ00604 133 aa8.12□□□□□ -1.11
COL4A6-208ENST00000538570 ICE1Q9Y2F5 2266 aa8.12□□□□□ -1.11
COL4A6-208ENST00000538570 H0YJW9 148 aa8.12□□□□□ -1.11
COL4A6-208ENST00000538570 BVES-AS1Q5T3Y7 98 aa8.12□□□□□ -1.11
COL4A6-208ENST00000538570 FLVCR1-AS1Q8TAF5 88 aa8.12□□□□□ -1.11
COL4A6-208ENST00000538570 IGKV1-27A0A075B6S5 117 aa8.11□□□□□ -1.11
COL4A6-208ENST00000538570 TMEM178BH3BS89 294 aa8.11□□□□□ -1.11
COL4A6-208ENST00000538570 RPL35AP18077 110 aaKnown RBP8.11□□□□□ -1.11
COL4A6-208ENST00000538570 SS18Q15532 418 aa8.11□□□□□ -1.11
COL4A6-208ENST00000538570 CD177Q8N6Q3 437 aa8.11□□□□□ -1.11
COL4A6-208ENST00000538570 CLUHP3Q96NS8 147 aa8.11□□□□□ -1.11
COL4A6-208ENST00000538570 ANAPC10Q9UM13 185 aa8.11□□□□□ -1.11
COL4A6-208ENST00000538570 PSCAO43653 123 aa8.11□□□□□ -1.11
COL4A6-208ENST00000538570 C9JQL5 133 aa8.11□□□□□ -1.11
COL4A6-208ENST00000538570 SIVA1O15304 175 aa8.11□□□□□ -1.11
COL4A6-208ENST00000538570 PRIMA1Q86XR5 153 aa8.11□□□□□ -1.11
COL4A6-208ENST00000538570 RNF183Q96D59 192 aa8.11□□□□□ -1.11
COL4A6-208ENST00000538570 SPATA25Q9BR10 227 aa8.11□□□□□ -1.11
COL4A6-208ENST00000538570 EFNA4P52798 201 aa8.11□□□□□ -1.11
COL4A6-208ENST00000538570 RPL32P62910 135 aaKnown RBP8.11□□□□□ -1.11
COL4A6-208ENST00000538570 TCTEX1D4Q5JR98 221 aa8.11□□□□□ -1.11
COL4A6-208ENST00000538570 LY6G5BQ8NDX9 201 aa8.11□□□□□ -1.11
COL4A6-208ENST00000538570 VWCEQ96DN2 955 aa8.11□□□□□ -1.11
COL4A6-208ENST00000538570 TEX48A0A1B0GUV7 120 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 FAM223BA6NKX1 122 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 PSPNO60542 156 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 NTF4P34130 210 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 Q6ZWC4 215 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 ZNF329Q86UD4 541 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 FAM223AQ8IWN6 122 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 USMG5Q96IX5 58 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 SOCS3O14543 225 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 CFHR1Q03591 330 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 C5orf64Q2M2E5 130 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 MST1LQ2TV78 715 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 CDPF1Q6NVV7 123 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 GGNQ86UU5 652 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 SMKR1H3BMG3 65 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 IL18BPO95998 194 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 M0R1W7 72 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 INAFM2P0DMQ5 153 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 C8orf86Q6ZUL3 223 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 G3V4G9 280 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 ZFP36L1Q07352 338 aaKnown RBP8.1□□□□□ -1.11
COL4A6-208ENST00000538570 C1orf195Q5TG92 126 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 GFRA4Q9GZZ7 299 aa8.1□□□□□ -1.11
COL4A6-208ENST00000538570 PRSS29PA6NIE9 313 aa8.09□□□□□ -1.11
COL4A6-208ENST00000538570 HAPLN4Q86UW8 402 aa8.09□□□□□ -1.11
COL4A6-208ENST00000538570 WDR90Q96KV7 1748 aa8.09□□□□□ -1.11
COL4A6-208ENST00000538570 BUB1B-PAK6H3BSN5 160 aa8.09□□□□□ -1.11
COL4A6-208ENST00000538570 CRIPAKQ8N1N5 446 aa8.09□□□□□ -1.11
COL4A6-208ENST00000538570 MESP1Q9BRJ9 268 aa8.09□□□□□ -1.11
COL4A6-208ENST00000538570 TRBV6-6A0A0A6YYG2 114 aa8.09□□□□□ -1.11
COL4A6-208ENST00000538570 PRSS57Q6UWY2 283 aa8.09□□□□□ -1.11
COL4A6-208ENST00000538570 A0A087WWL8 130 aa8.09□□□□□ -1.12
COL4A6-208ENST00000538570 UNQ6494/PRO21346Q6UXR6 183 aa8.09□□□□□ -1.12
COL4A6-208ENST00000538570 H3BUX3 64 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 RS1O15537 224 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 PIP4P2Q8N4L2 257 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 TET1Q8NFU7 2136 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 LIME1Q9H400 295 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 SIGLEC9Q9Y336 463 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 FOXG1P55316 489 aaPredicted RBP8.08□□□□□ -1.12
COL4A6-208ENST00000538570 IGFL4Q6B9Z1 124 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 Q86TA4 180 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 SIPA1L1O43166 1804 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 CACNA1IQ9P0X4 2223 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 K7ERJ3 54 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 CSRP1P21291 193 aaKnown RBP8.08□□□□□ -1.12
COL4A6-208ENST00000538570 NEGR1Q7Z3B1 354 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 TRPT1Q86TN4 253 aaKnown RBP8.08□□□□□ -1.12
COL4A6-208ENST00000538570 SPTSSBQ8NFR3 76 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 UBE2E2Q96LR5 201 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 GAFA1Q96PS6 74 aa8.08□□□□□ -1.12
COL4A6-208ENST00000538570 IGLC7A0M8Q6 106 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms