RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 BAP18Q8IXM2 172 aa13.89□□□□□ -0.19
TNFRSF1B-204ENST00000536782 BOLA2-SMG1P6H3BVE0 249 aa13.88□□□□□ -0.19
TNFRSF1B-204ENST00000536782 H2AFB2P0C5Z0 115 aa13.88□□□□□ -0.19
TNFRSF1B-204ENST00000536782 FAM3BP58499 235 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1B-204ENST00000536782 PLP1P60201 277 aa13.88□□□□□ -0.19
TNFRSF1B-204ENST00000536782 C1orf134Q5TEV5 83 aa13.88□□□□□ -0.19
TNFRSF1B-204ENST00000536782 S100A7AQ86SG5 101 aa13.88□□□□□ -0.19
TNFRSF1B-204ENST00000536782 TRAV12-2A0A075B6T6 113 aa13.87□□□□□ -0.19
TNFRSF1B-204ENST00000536782 PMS2P5A8MQ11 134 aa13.87□□□□□ -0.19
TNFRSF1B-204ENST00000536782 SSSCA1O60232 199 aa13.87□□□□□ -0.19
TNFRSF1B-204ENST00000536782 DEFB130BP0DP73 79 aa13.87□□□□□ -0.19
TNFRSF1B-204ENST00000536782 DEFB130AP0DP74 79 aa13.87□□□□□ -0.19
TNFRSF1B-204ENST00000536782 RHOBP62745 196 aa13.87□□□□□ -0.19
TNFRSF1B-204ENST00000536782 DLK1P80370 383 aa13.87□□□□□ -0.19
TNFRSF1B-204ENST00000536782 HIST1H1AQ02539 215 aaPredicted RBP13.87□□□□□ -0.19
TNFRSF1B-204ENST00000536782 IAH1Q2TAA2 248 aaPredicted RBP13.87□□□□□ -0.19
TNFRSF1B-204ENST00000536782 LRRC20Q8TCA0 184 aa13.87□□□□□ -0.19
TNFRSF1B-204ENST00000536782 ZNF431Q8TF32 576 aaPredicted RBP13.87□□□□□ -0.19
TNFRSF1B-204ENST00000536782 SMIM8Q96KF7 97 aa13.87□□□□□ -0.19
TNFRSF1B-204ENST00000536782 UHRF2Q96PU4 802 aa13.87□□□□□ -0.19
TNFRSF1B-204ENST00000536782 ATG101Q9BSB4 218 aa13.87□□□□□ -0.19
TNFRSF1B-204ENST00000536782 PPP1R14DQ9NXH3 145 aa13.87□□□□□ -0.19
TNFRSF1B-204ENST00000536782 A0A087X0K7 114 aa13.86□□□□□ -0.19
TNFRSF1B-204ENST00000536782 CXCL3P19876 107 aa13.86□□□□□ -0.19
TNFRSF1B-204ENST00000536782 AZU1P20160 251 aa13.86□□□□□ -0.19
TNFRSF1B-204ENST00000536782 RRAS2P62070 204 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF1B-204ENST00000536782 ZBTB8BQ8NAP8 495 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF1B-204ENST00000536782 OR8A1Q8NGG7 326 aa13.86□□□□□ -0.19
TNFRSF1B-204ENST00000536782 LINC01587Q99440 93 aa13.86□□□□□ -0.19
TNFRSF1B-204ENST00000536782 NPVFQ9HCQ7 196 aa13.86□□□□□ -0.19
TNFRSF1B-204ENST00000536782 HSPG2P98160 4391 aa13.86□□□□□ -0.19
TNFRSF1B-204ENST00000536782 CCNKO75909 580 aa13.85□□□□□ -0.19
TNFRSF1B-204ENST00000536782 PSG3Q16557 428 aa13.85□□□□□ -0.19
TNFRSF1B-204ENST00000536782 TMEM256Q8N2U0 113 aa13.85□□□□□ -0.19
TNFRSF1B-204ENST00000536782 ARL6Q9H0F7 186 aa13.85□□□□□ -0.19
TNFRSF1B-204ENST00000536782 RNF24Q9Y225 148 aa13.85□□□□□ -0.19
TNFRSF1B-204ENST00000536782 PLAC8L1A1L4L8 177 aa13.84□□□□□ -0.19
TNFRSF1B-204ENST00000536782 FNDC10F2Z333 226 aa13.84□□□□□ -0.19
TNFRSF1B-204ENST00000536782 F5H768 121 aa13.84□□□□□ -0.19
TNFRSF1B-204ENST00000536782 METTL15P1P0C7V9 234 aa13.84□□□□□ -0.19
TNFRSF1B-204ENST00000536782 TAS2R60P59551 318 aa13.84□□□□□ -0.19
TNFRSF1B-204ENST00000536782 FCN2Q15485 313 aa13.84□□□□□ -0.19
TNFRSF1B-204ENST00000536782 TEPPQ6URK8 271 aa13.84□□□□□ -0.19
TNFRSF1B-204ENST00000536782 TMEM14EPQ6UXP3 125 aa13.84□□□□□ -0.19
TNFRSF1B-204ENST00000536782 C12orf45Q8N5I9 185 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1B-204ENST00000536782 OR10P1Q8NGE3 313 aa13.84□□□□□ -0.19
TNFRSF1B-204ENST00000536782 ENKURQ8TC29 256 aa13.84□□□□□ -0.19
TNFRSF1B-204ENST00000536782 SEC22CQ9BRL7 303 aa13.84□□□□□ -0.19
TNFRSF1B-204ENST00000536782 MGAT4CQ9UBM8 478 aa13.84□□□□□ -0.19
TNFRSF1B-204ENST00000536782 K7EPK0 472 aa13.83□□□□□ -0.2
TNFRSF1B-204ENST00000536782 ATP5G1P05496 136 aa13.83□□□□□ -0.2
TNFRSF1B-204ENST00000536782 ATP5G3P48201 142 aa13.83□□□□□ -0.2
TNFRSF1B-204ENST00000536782 TAS2R30P59541 319 aa13.83□□□□□ -0.2
TNFRSF1B-204ENST00000536782 PATE2Q6UY27 113 aa13.83□□□□□ -0.2
TNFRSF1B-204ENST00000536782 ARV1Q9H2C2 271 aa13.83□□□□□ -0.2
TNFRSF1B-204ENST00000536782 GSKIPQ9P0R6 139 aa13.83□□□□□ -0.2
TNFRSF1B-204ENST00000536782 CBY3A6NI87 242 aa13.82□□□□□ -0.2
TNFRSF1B-204ENST00000536782 TSC22D2O75157 780 aa13.82□□□□□ -0.2
TNFRSF1B-204ENST00000536782 SCGB1D2O95969 90 aa13.82□□□□□ -0.2
TNFRSF1B-204ENST00000536782 NUDT3O95989 172 aa13.82□□□□□ -0.2
TNFRSF1B-204ENST00000536782 HTN1P15515 57 aa13.82□□□□□ -0.2
TNFRSF1B-204ENST00000536782 IFITM3Q01628 133 aa13.82□□□□□ -0.2
TNFRSF1B-204ENST00000536782 SLC38A11Q08AI6 406 aa13.82□□□□□ -0.2
TNFRSF1B-204ENST00000536782 PXDC1Q5TGL8 231 aa13.82□□□□□ -0.2
TNFRSF1B-204ENST00000536782 RPUSD4Q96CM3 377 aaKnown RBP13.82□□□□□ -0.2
TNFRSF1B-204ENST00000536782 C16orf74Q96GX8 76 aa13.82□□□□□ -0.2
TNFRSF1B-204ENST00000536782 RCL1Q9Y2P8 373 aaKnown RBP13.82□□□□□ -0.2
TNFRSF1B-204ENST00000536782 GOSR2O14653 212 aa13.81□□□□□ -0.2
TNFRSF1B-204ENST00000536782 MRPS12O15235 138 aaKnown RBP13.81□□□□□ -0.2
TNFRSF1B-204ENST00000536782 CXCL2P19875 107 aa13.81□□□□□ -0.2
TNFRSF1B-204ENST00000536782 CDKN1BP46527 198 aa13.81□□□□□ -0.2
TNFRSF1B-204ENST00000536782 ZNF575Q86XF7 245 aa13.81□□□□□ -0.2
TNFRSF1B-204ENST00000536782 TIMM8BQ9Y5J9 83 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF1B-204ENST00000536782 CCSO14618 274 aa13.8□□□□□ -0.2
TNFRSF1B-204ENST00000536782 MBPP02686 304 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF1B-204ENST00000536782 PRB4P10163 310 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF1B-204ENST00000536782 CCL18P55774 89 aa13.8□□□□□ -0.2
TNFRSF1B-204ENST00000536782 LCN15Q6UWW0 184 aa13.8□□□□□ -0.2
TNFRSF1B-204ENST00000536782 LINC00305Q7Z4B0 112 aa13.8□□□□□ -0.2
TNFRSF1B-204ENST00000536782 ZNF546Q86UE3 836 aa13.8□□□□□ -0.2
TNFRSF1B-204ENST00000536782 SLC50A1Q9BRV3 221 aa13.8□□□□□ -0.2
TNFRSF1B-204ENST00000536782 KRTAP4-5Q9BYR2 181 aa13.8□□□□□ -0.2
TNFRSF1B-204ENST00000536782 NBDYA0A0U1RRE5 68 aa13.79□□□□□ -0.2
TNFRSF1B-204ENST00000536782 C5orf51A6NDU8 294 aa13.79□□□□□ -0.2
TNFRSF1B-204ENST00000536782 FAM25EA8MYX2 175 aa13.79□□□□□ -0.2
TNFRSF1B-204ENST00000536782 DEFA1P59665 94 aa13.79□□□□□ -0.2
TNFRSF1B-204ENST00000536782 DEFA3P59666 94 aa13.79□□□□□ -0.2
TNFRSF1B-204ENST00000536782 ZNF493Q6ZR52 646 aa13.79□□□□□ -0.2
TNFRSF1B-204ENST00000536782 ZNRF2Q8NHG8 242 aa13.79□□□□□ -0.2
TNFRSF1B-204ENST00000536782 C2orf50Q96LR7 162 aa13.79□□□□□ -0.2
TNFRSF1B-204ENST00000536782 GPN1Q9HCN4 374 aaPredicted RBP13.79□□□□□ -0.2
TNFRSF1B-204ENST00000536782 ZNF331Q9NQX6 463 aaPredicted RBP13.79□□□□□ -0.2
TNFRSF1B-204ENST00000536782 H7BYZ3 331 aa13.78□□□□□ -0.2
TNFRSF1B-204ENST00000536782 AGPAT2O15120 278 aa13.78□□□□□ -0.2
TNFRSF1B-204ENST00000536782 PRAF2O60831 178 aa13.78□□□□□ -0.2
TNFRSF1B-204ENST00000536782 NRARPQ7Z6K4 114 aa13.78□□□□□ -0.2
TNFRSF1B-204ENST00000536782 BPIFA4PQ86YQ2 179 aa13.78□□□□□ -0.2
TNFRSF1B-204ENST00000536782 TMEM263Q8WUH6 116 aaKnown RBP13.78□□□□□ -0.2
TNFRSF1B-204ENST00000536782 GGACTQ9BVM4 153 aa13.78□□□□□ -0.2
TNFRSF1B-204ENST00000536782 LRP1BQ9NZR2 4599 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms